RNA–Protein interactions for RNA: ENST00000638985.1

FTX-216, Transcript of FTX transcript, XIST regulator, humanhuman

TSL 5 BASIC

Gene FTX, Length 1,367 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FTX-216ENST00000638985 FMR1Q06787 632 aaKnown RBP eCLIP17.31■□□□□ 0.362e-19■■■■■ 257.2
FTX-216ENST00000638985 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.2□□□□□ -0.31e-8■■■■■ 114.2
FTX-216ENST00000638985 SF3B1O75533 1304 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■■■■ 92.9
FTX-216ENST00000638985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■■■ 56.2
FTX-216ENST00000638985 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.29■■□□□ 1.164e-8■■■■■ 52.5
FTX-216ENST00000638985 RBFOX2O43251 390 aaKnown RBP eCLIP10.84□□□□□ -0.671e-7■■■■■ 52.2
FTX-216ENST00000638985 TARDBPQ13148 414 aaKnown RBP eCLIP13.81□□□□□ -0.24e-11■■■■■ 42.6
FTX-216ENST00000638985 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.64■□□□□ 0.092e-11■■■■■ 38.8
FTX-216ENST00000638985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.33■■□□□ 1.016e-7■■■■■ 35
FTX-216ENST00000638985 CSTF2P33240 577 aaKnown RBP eCLIP13.62□□□□□ -0.233e-7■■■■■ 34.2
FTX-216ENST00000638985 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.696e-8■■■■■ 27.6
FTX-216ENST00000638985 RBM15Q96T37 977 aaKnown RBP eCLIP13.98□□□□□ -0.171e-6■■■■□ 25.7
FTX-216ENST00000638985 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.649e-7■■■■□ 25.2
FTX-216ENST00000638985 TIA1P31483 386 aaKnown RBP eCLIP12.94□□□□□ -0.346e-7■■■■□ 25.2
FTX-216ENST00000638985 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.68□□□□□ -0.227e-7■■■■□ 24.3
FTX-216ENST00000638985 DKC1O60832 514 aaKnown RBP eCLIP15.65■□□□□ 0.13e-14■■■■□ 24.3
FTX-216ENST00000638985 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.94□□□□□ -0.345e-7■■■■□ 24.2
FTX-216ENST00000638985 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.166e-7■■■■□ 24.1
FTX-216ENST00000638985 NCBP2P52298 156 aaKnown RBP eCLIP12.86□□□□□ -0.351e-11■■■■□ 22.4
FTX-216ENST00000638985 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.03□□□□□ -0.322e-11■■■■□ 21.9
FTX-216ENST00000638985 MATR3P43243 847 aaKnown RBP eCLIP15.25■□□□□ 0.031e-6■■■□□ 19.2
FTX-216ENST00000638985 HLTFQ14527 1009 aaKnown RBP eCLIP13.8□□□□□ -0.21e-6■■■□□ 19.2
FTX-216ENST00000638985 ILF3Q12906 894 aaKnown RBP eCLIP13.83□□□□□ -0.191e-6■■■□□ 19.2
FTX-216ENST00000638985 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.73□□□□□ -0.533e-13■■■□□ 19
FTX-216ENST00000638985 U2AF2P26368 475 aaKnown RBP eCLIP15.69■□□□□ 0.14e-7■■■□□ 18.9
FTX-216ENST00000638985 SRSF1Q07955 248 aaKnown RBP eCLIP12.91□□□□□ -0.344e-8■■■□□ 18.6
FTX-216ENST00000638985 EIF4G2P78344 907 aaKnown RBP eCLIP19.51■□□□□ 0.711e-7■■■□□ 17.9
FTX-216ENST00000638985 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.39□□□□□ -0.114e-6■■■□□ 17.4
FTX-216ENST00000638985 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■■■□□ 17.3
FTX-216ENST00000638985 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.174e-8■■■□□ 17.1
FTX-216ENST00000638985 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.19e-7■■■□□ 16.9
FTX-216ENST00000638985 PCBP2Q15366 365 aaKnown RBP eCLIP13.19□□□□□ -0.36e-13■■■□□ 16.3
FTX-216ENST00000638985 KHSRPQ92945 711 aaKnown RBP eCLIP15.05■□□□□ -05e-7■■■□□ 15.9
FTX-216ENST00000638985 SF3B4Q15427 424 aaKnown RBP eCLIP12.64□□□□□ -0.392e-8■■■□□ 15.7
FTX-216ENST00000638985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.49■□□□□ 0.714e-7■■■□□ 14.6
FTX-216ENST00000638985 ZNF622Q969S3 477 aaKnown RBP eCLIP17.98■□□□□ 0.471e-7■■□□□ 14.4
FTX-216ENST00000638985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.613e-7■■□□□ 14.3
FTX-216ENST00000638985 FUSP35637 526 aaKnown RBP eCLIP9.29□□□□□ -0.922e-6■■□□□ 14.2
FTX-216ENST00000638985 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■□□□ 13.7
FTX-216ENST00000638985 HNRNPCP07910 306 aaKnown RBP eCLIP10.38□□□□□ -0.754e-7■■□□□ 13.7
FTX-216ENST00000638985 HNRNPLP14866 589 aaKnown RBP eCLIP14.46□□□□□ -0.11e-6■■□□□ 13.5
FTX-216ENST00000638985 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.032e-6■■□□□ 13.4
FTX-216ENST00000638985 QKIQ96PU8 341 aaKnown RBP eCLIP13.98□□□□□ -0.174e-8■■□□□ 13.3
FTX-216ENST00000638985 SFPQP23246 707 aaKnown RBP eCLIP15.51■□□□□ 0.075e-7■■□□□ 13.2
FTX-216ENST00000638985 PRPF4O43172 522 aaKnown RBP eCLIP13.25□□□□□ -0.294e-6■■□□□ 12.7
FTX-216ENST00000638985 PPIGQ13427 754 aaKnown RBP eCLIP15.85■□□□□ 0.134e-7■■□□□ 11.7
FTX-216ENST00000638985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 12e-7■■□□□ 11.6
FTX-216ENST00000638985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.87■□□□□ 0.299e-41■■□□□ 11.4
FTX-216ENST00000638985 TIAL1Q01085 375 aaKnown RBP eCLIP13.47□□□□□ -0.258e-8■□□□□ 11
FTX-216ENST00000638985 TAF15Q92804 592 aaKnown RBP eCLIP11.35□□□□□ -0.595e-7■□□□□ 11
FTX-216ENST00000638985 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.92□□□□□ -0.349e-7■□□□□ 10.4
FTX-216ENST00000638985 GTF2F1P35269 517 aaKnown RBP eCLIP15.29■□□□□ 0.041e-7■□□□□ 10
FTX-216ENST00000638985 SAFBQ15424 915 aaKnown RBP eCLIP15.76■□□□□ 0.114e-9■□□□□ 9.1
FTX-216ENST00000638985 HNRNPUQ00839 825 aaKnown RBP eCLIP17.79■□□□□ 0.441e-6■□□□□ 8.9
FTX-216ENST00000638985 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.034e-6■□□□□ 8.5
Retrieved 55 of 55 RNA–protein pairs in 12.5 ms