RNA–Protein interactions for RNA: ENST00000638018.1

CHML-203, Transcript of CHM like, Rab escort protein 2, humanhuman

TSL 3

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHML-203ENST00000638018 NISCHQ9Y2I1 1504 aa65.64■■■■■ 8.1
CHML-203ENST00000638018 CCDC180Q9P1Z9 1646 aa58.41■■■■■ 6.94
CHML-203ENST00000638018 ABCC9O60706 1549 aa57.54■■■■■ 6.8
CHML-203ENST00000638018 RB1CC1Q8TDY2 1594 aa55.21■■■■■ 6.43
CHML-203ENST00000638018 NACADO15069 1562 aa55.09■■■■■ 6.41
CHML-203ENST00000638018 DCAF8L2P0C7V8 631 aa55.08■■■■■ 6.41
CHML-203ENST00000638018 MYO15BQ96JP2 1530 aa54.68■■■■■ 6.34
CHML-203ENST00000638018 ZCCHC6Q5VYS8 1495 aaKnown RBP54.57■■■■■ 6.33
CHML-203ENST00000638018 DCAF1Q9Y4B6 1507 aa54.31■■■■■ 6.28
CHML-203ENST00000638018 UNC13AQ9UPW8 1703 aa53.79■■■■■ 6.2
CHML-203ENST00000638018 PABPN1Q86U42 306 aaKnown RBP eCLIP53.78■■■■■ 6.2
CHML-203ENST00000638018 BICRAQ9NZM4 1560 aa53.49■■■■■ 6.15
CHML-203ENST00000638018 SCRIBQ14160 1630 aa53.26■■■■■ 6.12
CHML-203ENST00000638018 DNAJC5BQ9UF47 199 aa53.18■■■■■ 6.1
CHML-203ENST00000638018 SHROOM4Q9ULL8 1493 aa52.99■■■■■ 6.07
CHML-203ENST00000638018 EIF4G1Q04637 1599 aaKnown RBP52.14■■■■■ 5.94
CHML-203ENST00000638018 CC2D2AQ9P2K1 1620 aa52■■■■■ 5.91
CHML-203ENST00000638018 CECR2Q9BXF3 1484 aa51.77■■■■■ 5.88
CHML-203ENST00000638018 SMARCA4P51532 1647 aa50.94■■■■■ 5.74
CHML-203ENST00000638018 BAZ1AQ9NRL2 1556 aaPredicted RBP50.89■■■■■ 5.74
CHML-203ENST00000638018 NCAPD3P42695 1498 aa50.88■■■■■ 5.74
CHML-203ENST00000638018 ATAD2BQ9ULI0 1458 aa50.83■■■■■ 5.73
CHML-203ENST00000638018 SMARCA2P51531 1590 aa50.73■■■■■ 5.71
CHML-203ENST00000638018 MROH2BQ7Z745 1585 aa50.55■■■■■ 5.68
CHML-203ENST00000638018 HMGXB3Q12766 1538 aa50.52■■■■■ 5.68
CHML-203ENST00000638018 PEG3Q9GZU2 1588 aa50.48■■■■■ 5.67
CHML-203ENST00000638018 BAZ1BQ9UIG0 1483 aaKnown RBP50.37■■■■■ 5.65
CHML-203ENST00000638018 WIZO95785 1651 aa49.93■■■■■ 5.58
CHML-203ENST00000638018 RSF1Q96T23 1441 aaPredicted RBP49.91■■■■■ 5.58
CHML-203ENST00000638018 NESP48681 1621 aa49.67■■■■■ 5.54
CHML-203ENST00000638018 ERCC6Q03468 1493 aa49.65■■■■■ 5.54
CHML-203ENST00000638018 LAMC3Q9Y6N6 1575 aa49.52■■■■■ 5.52
CHML-203ENST00000638018 TOP2AP11388 1531 aaKnown RBP49.43■■■■■ 5.5
CHML-203ENST00000638018 CADPSQ9ULU8 1353 aa49.4■■■■■ 5.5
CHML-203ENST00000638018 PDS5BQ9NTI5 1447 aa49.29■■■■■ 5.48
CHML-203ENST00000638018 CUX2O14529 1486 aa49.25■■■■■ 5.48
CHML-203ENST00000638018 CFTRP13569 1480 aa48.99■■■■■ 5.43
CHML-203ENST00000638018 KIF21AQ7Z4S6 1674 aa48.98■■■■■ 5.43
CHML-203ENST00000638018 THOC2Q8NI27 1593 aaKnown RBP48.93■■■■■ 5.42
CHML-203ENST00000638018 CCDC88BA6NC98 1476 aa48.9■■■■■ 5.42
CHML-203ENST00000638018 FANCD2Q9BXW9 1451 aa48.78■■■■■ 5.4
CHML-203ENST00000638018 MRC2Q9UBG0 1479 aa48.74■■■■■ 5.39
CHML-203ENST00000638018 CEP164Q9UPV0 1460 aa48.74■■■■■ 5.39
CHML-203ENST00000638018 WDR62O43379 1518 aa48.55■■■■■ 5.36
CHML-203ENST00000638018 SUPT5HO00267 1087 aaKnown RBP48.44■■■■■ 5.34
CHML-203ENST00000638018 PRDM2Q13029 1718 aa48.42■■■■■ 5.34
CHML-203ENST00000638018 URB2Q14146 1524 aaKnown RBP48.27■■■■■ 5.32
CHML-203ENST00000638018 DNAJC5Q9H3Z4 198 aa48.22■■■■■ 5.31
CHML-203ENST00000638018 ABCC8Q09428 1581 aa48■■■■■ 5.27
CHML-203ENST00000638018 TOPBP1Q92547 1522 aa47.94■■■■■ 5.26
CHML-203ENST00000638018 DNMBPQ6XZF7 1577 aa47.83■■■■■ 5.25
CHML-203ENST00000638018 IFT140Q96RY7 1462 aa47.76■■■■■ 5.24
CHML-203ENST00000638018 ZNF608Q9ULD9 1512 aaPredicted RBP47.52■■■■■ 5.2
CHML-203ENST00000638018 POLA1P09884 1462 aaPredicted RBP47.51■■■■■ 5.2
CHML-203ENST00000638018 CUX1P39880 1505 aa47.44■■■■■ 5.18
CHML-203ENST00000638018 TARBP1Q13395 1621 aaKnown RBP47.4■■■■■ 5.18
CHML-203ENST00000638018 SOGA1O94964 1423 aa47.38■■■■■ 5.17
CHML-203ENST00000638018 FGD5Q6ZNL6 1462 aa47.33■■■■■ 5.17
CHML-203ENST00000638018 RAD54L2Q9Y4B4 1467 aa47.31■■■■■ 5.16
CHML-203ENST00000638018 OSCARQ8IYS5 282 aa47.26■■■■■ 5.16
CHML-203ENST00000638018 AQRO60306 1485 aaKnown RBP eCLIP47.26■■■■■ 5.161e-12■■■■□ 20.3
CHML-203ENST00000638018 EIF4G3O43432 1585 aaKnown RBP47.25■■■■■ 5.15
CHML-203ENST00000638018 TDRD9Q8NDG6 1382 aaKnown RBP47.14■■■■■ 5.14
CHML-203ENST00000638018 WRNQ14191 1432 aaPredicted RBP eCLIP47.07■■■■■ 5.13
CHML-203ENST00000638018 WDR97A6NE52 1622 aa47.04■■■■■ 5.12
CHML-203ENST00000638018 TOP2BQ02880 1626 aa46.94■■■■■ 5.1
CHML-203ENST00000638018 ABCA10Q8WWZ4 1543 aa46.89■■■■■ 5.1
CHML-203ENST00000638018 BIVM-ERCC5R4GMW8 1640 aa46.89■■■■■ 5.1
CHML-203ENST00000638018 SYNJ1O43426 1573 aa46.87■■■■■ 5.09
CHML-203ENST00000638018 GRIN2BQ13224 1484 aa46.84■■■■■ 5.09
CHML-203ENST00000638018 FBLN2P98095 1184 aa46.82■■■■■ 5.09
CHML-203ENST00000638018 GAPVD1Q14C86 1478 aa46.79■■■■■ 5.08
CHML-203ENST00000638018 SNAPC4Q5SXM2 1469 aa46.76■■■■■ 5.08
CHML-203ENST00000638018 MAGI1Q96QZ7 1491 aaPredicted RBP46.73■■■■■ 5.07
CHML-203ENST00000638018 CHD1O14646 1710 aa46.68■■■■■ 5.06
CHML-203ENST00000638018 CHMP7Q8WUX9 453 aaPredicted RBP46.66■■■■■ 5.06
CHML-203ENST00000638018 ABCA5Q8WWZ7 1642 aa46.65■■■■■ 5.06
CHML-203ENST00000638018 PBRM1Q86U86 1689 aa46.56■■■■■ 5.04
CHML-203ENST00000638018 SYNJ2O15056 1496 aa46.56■■■■■ 5.04
CHML-203ENST00000638018 TRIM41Q8WV44 630 aa46.44■■■■■ 5.02
CHML-203ENST00000638018 ARHGEF11O15085 1522 aa46.35■■■■■ 5.01
CHML-203ENST00000638018 RIMBP3CA6NJZ7 1639 aa46.35■■■■■ 5.01
CHML-203ENST00000638018 RIMBP3BA6NNM3 1639 aa46.35■■■■■ 5.01
CHML-203ENST00000638018 RIMBP3Q9UFD9 1639 aa46.35■■■■■ 5.01
CHML-203ENST00000638018 ERICH3Q5RHP9 1530 aa46.33■■■■■ 5.01
CHML-203ENST00000638018 FHAD1B1AJZ9 1412 aa46.26■■■■■ 5
CHML-203ENST00000638018 CLASP1Q7Z460 1538 aa46.25■■■■■ 4.99
CHML-203ENST00000638018 ADAMTS12P58397 1594 aa46.23■■■■■ 4.99
CHML-203ENST00000638018 GRIN2AQ12879 1464 aa46.2■■■■■ 4.99
CHML-203ENST00000638018 KIF27Q86VH2 1401 aa46.14■■■■■ 4.98
CHML-203ENST00000638018 CYB5RLQ6IPT4 315 aa46.06■■■■■ 4.96
CHML-203ENST00000638018 NUP160Q12769 1436 aa46.03■■■■■ 4.96
CHML-203ENST00000638018 IGF1RP08069 1367 aa46.02■■■■■ 4.96
CHML-203ENST00000638018 ARAP1Q96P48 1450 aa45.95■■■■■ 4.95
CHML-203ENST00000638018 CEP170Q5SW79 1584 aa45.93■■■■■ 4.94
CHML-203ENST00000638018 CUL7Q14999 1698 aa45.78■■■■■ 4.92
CHML-203ENST00000638018 CARMIL1Q5VZK9 1371 aa45.73■■■■■ 4.91
CHML-203ENST00000638018 JPH4Q96JJ6 628 aa45.66■■■■■ 4.9
CHML-203ENST00000638018 SHROOM2Q13796 1616 aa45.65■■■■■ 4.9
CHML-203ENST00000638018 ERCC6L2Q5T890 1561 aa45.56■■■■■ 4.88
Retrieved 100 of 20,778 RNA–protein pairs in 775.8 ms