RNA–Protein interactions for RNA: ENST00000638007.1

ZEB2-244, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 5 BASIC

Gene ZEB2, Length 9,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-244ENST00000638007 QKIQ96PU8 341 aaKnown RBP eCLIP6.73□□□□□ -1.333e-26■■■■■ 159.2
ZEB2-244ENST00000638007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.81□□□□□ -1.162e-6■■■■■ 71.8
ZEB2-244ENST00000638007 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.23□□□□□ -1.415e-6■■■■■ 56.5
ZEB2-244ENST00000638007 HNRNPKP61978 463 aaKnown RBP eCLIP6.25□□□□□ -1.411e-6■■■■□ 22.3
ZEB2-244ENST00000638007 SAFB2Q14151 953 aaKnown RBP eCLIP7.85□□□□□ -1.153e-7■■■■□ 22.1
ZEB2-244ENST00000638007 SMNDC1O75940 238 aaKnown RBP eCLIP6.96□□□□□ -1.37e-6■■■■□ 20.7
ZEB2-244ENST00000638007 SF3B4Q15427 424 aaKnown RBP eCLIP6.05□□□□□ -1.442e-6■■■■□ 20.1
ZEB2-244ENST00000638007 ILF3Q12906 894 aaKnown RBP eCLIP6.58□□□□□ -1.361e-5■■■■□ 19.3
ZEB2-244ENST00000638007 AQRO60306 1485 aaKnown RBP eCLIP8.83□□□□□ -11e-6■■■□□ 19.1
ZEB2-244ENST00000638007 RBM15Q96T37 977 aaKnown RBP eCLIP6.42□□□□□ -1.388e-7■■■□□ 16.8
ZEB2-244ENST00000638007 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.66□□□□□ -1.189e-8■■■□□ 16.5
ZEB2-244ENST00000638007 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.04□□□□□ -1.283e-7■■■□□ 16.4
ZEB2-244ENST00000638007 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.44□□□□□ -1.382e-6■■■□□ 16.3
ZEB2-244ENST00000638007 SAFBQ15424 915 aaKnown RBP eCLIP7.41□□□□□ -1.224e-6■■■□□ 15.1
ZEB2-244ENST00000638007 YBX3P16989 372 aaKnown RBP eCLIP6.23□□□□□ -1.411e-6■■■□□ 14.9
ZEB2-244ENST00000638007 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.64□□□□□ -1.351e-6■■■□□ 14.7
ZEB2-244ENST00000638007 ZNF622Q969S3 477 aaKnown RBP eCLIP6.98□□□□□ -1.294e-11■■□□□ 14.4
ZEB2-244ENST00000638007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.2□□□□□ -1.19e-7■■□□□ 12.4
ZEB2-244ENST00000638007 HNRNPLP14866 589 aaKnown RBP eCLIP6.2□□□□□ -1.422e-6■■□□□ 12.1
ZEB2-244ENST00000638007 SRSF7Q16629 238 aaKnown RBP eCLIP5.45□□□□□ -1.546e-6■□□□□ 11.2
ZEB2-244ENST00000638007 NIPBLQ6KC79 2804 aaeCLIP4.82□□□□□ -1.644e-11■□□□□ 10.6
ZEB2-244ENST00000638007 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.03□□□□□ -1.442e-6■□□□□ 10.2
ZEB2-244ENST00000638007 TRA2AQ13595 282 aaKnown RBP eCLIP5.89□□□□□ -1.476e-7■□□□□ 10
ZEB2-244ENST00000638007 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.89□□□□□ -1.312e-6■□□□□ 9.4
ZEB2-244ENST00000638007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.02□□□□□ -1.454e-6■□□□□ 9.1
ZEB2-244ENST00000638007 EFTUD2Q15029 972 aaKnown RBP eCLIP6.55□□□□□ -1.365e-8■□□□□ 8.4
ZEB2-244ENST00000638007 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.97□□□□□ -1.297e-6■□□□□ 8
Retrieved 27 of 27 RNA–protein pairs in 7.6 ms