RNA–Protein interactions for RNA: ENST00000637917.1

MECP2-224, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-224ENST00000637917 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
MECP2-224ENST00000637917 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
MECP2-224ENST00000637917 ABCC9O60706 1549 aa19.34■□□□□ 0.69
MECP2-224ENST00000637917 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
MECP2-224ENST00000637917 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
MECP2-224ENST00000637917 NACADO15069 1562 aa18.61■□□□□ 0.57
MECP2-224ENST00000637917 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
MECP2-224ENST00000637917 MYO15BQ96JP2 1530 aa18.48■□□□□ 0.55
MECP2-224ENST00000637917 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
MECP2-224ENST00000637917 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
MECP2-224ENST00000637917 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
MECP2-224ENST00000637917 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
MECP2-224ENST00000637917 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
MECP2-224ENST00000637917 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
MECP2-224ENST00000637917 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
MECP2-224ENST00000637917 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
MECP2-224ENST00000637917 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
MECP2-224ENST00000637917 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
MECP2-224ENST00000637917 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
MECP2-224ENST00000637917 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
MECP2-224ENST00000637917 MROH2BQ7Z745 1585 aa17.23■□□□□ 0.35
MECP2-224ENST00000637917 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
MECP2-224ENST00000637917 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
MECP2-224ENST00000637917 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
MECP2-224ENST00000637917 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
MECP2-224ENST00000637917 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
MECP2-224ENST00000637917 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
MECP2-224ENST00000637917 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
MECP2-224ENST00000637917 WIZO95785 1651 aa17.07■□□□□ 0.32
MECP2-224ENST00000637917 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
MECP2-224ENST00000637917 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
MECP2-224ENST00000637917 NESP48681 1621 aa16.75■□□□□ 0.27
MECP2-224ENST00000637917 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
MECP2-224ENST00000637917 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
MECP2-224ENST00000637917 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
MECP2-224ENST00000637917 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
MECP2-224ENST00000637917 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
MECP2-224ENST00000637917 CFTRP13569 1480 aa16.59■□□□□ 0.25
MECP2-224ENST00000637917 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
MECP2-224ENST00000637917 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
MECP2-224ENST00000637917 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
MECP2-224ENST00000637917 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
MECP2-224ENST00000637917 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
MECP2-224ENST00000637917 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
MECP2-224ENST00000637917 CUX2O14529 1486 aa16.42■□□□□ 0.22
MECP2-224ENST00000637917 WDR62O43379 1518 aa16.34■□□□□ 0.21
MECP2-224ENST00000637917 URB2Q14146 1524 aaKnown RBP16.31■□□□□ 0.2
MECP2-224ENST00000637917 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
MECP2-224ENST00000637917 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
MECP2-224ENST00000637917 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
MECP2-224ENST00000637917 CUX1P39880 1505 aa16.15■□□□□ 0.18
MECP2-224ENST00000637917 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
MECP2-224ENST00000637917 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
MECP2-224ENST00000637917 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
MECP2-224ENST00000637917 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
MECP2-224ENST00000637917 SOGA1O94964 1423 aa16.08■□□□□ 0.16
MECP2-224ENST00000637917 RAD54L2Q9Y4B4 1467 aa16.06■□□□□ 0.16
MECP2-224ENST00000637917 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
MECP2-224ENST00000637917 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
MECP2-224ENST00000637917 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
MECP2-224ENST00000637917 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
MECP2-224ENST00000637917 BIVM-ERCC5R4GMW8 1640 aa16.03■□□□□ 0.16
MECP2-224ENST00000637917 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
MECP2-224ENST00000637917 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.15
MECP2-224ENST00000637917 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
MECP2-224ENST00000637917 ABCA10Q8WWZ4 1543 aa15.93■□□□□ 0.14
MECP2-224ENST00000637917 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
MECP2-224ENST00000637917 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
MECP2-224ENST00000637917 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
MECP2-224ENST00000637917 GRIN2BQ13224 1484 aa15.87■□□□□ 0.13
MECP2-224ENST00000637917 FBLN2P98095 1184 aa15.86■□□□□ 0.13
MECP2-224ENST00000637917 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
MECP2-224ENST00000637917 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
MECP2-224ENST00000637917 OSCARQ8IYS5 282 aa15.83■□□□□ 0.12
MECP2-224ENST00000637917 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
MECP2-224ENST00000637917 DNAJC5Q9H3Z4 198 aa15.82■□□□□ 0.12
MECP2-224ENST00000637917 CHMP7Q8WUX9 453 aaPredicted RBP15.81■□□□□ 0.12
MECP2-224ENST00000637917 MAGI1Q96QZ7 1491 aaPredicted RBP15.79■□□□□ 0.12
MECP2-224ENST00000637917 KIF27Q86VH2 1401 aa15.78■□□□□ 0.12
MECP2-224ENST00000637917 CHD1O14646 1710 aa15.78■□□□□ 0.12
MECP2-224ENST00000637917 ERICH3Q5RHP9 1530 aa15.74■□□□□ 0.11
MECP2-224ENST00000637917 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
MECP2-224ENST00000637917 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
MECP2-224ENST00000637917 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
MECP2-224ENST00000637917 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
MECP2-224ENST00000637917 IGF1RP08069 1367 aa15.68■□□□□ 0.1
MECP2-224ENST00000637917 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
MECP2-224ENST00000637917 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
MECP2-224ENST00000637917 CUL7Q14999 1698 aa15.63■□□□□ 0.09
MECP2-224ENST00000637917 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
MECP2-224ENST00000637917 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.08
MECP2-224ENST00000637917 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
MECP2-224ENST00000637917 CEP170Q5SW79 1584 aa15.55■□□□□ 0.08
MECP2-224ENST00000637917 NUP160Q12769 1436 aa15.55■□□□□ 0.08
MECP2-224ENST00000637917 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
MECP2-224ENST00000637917 RAPGEF2Q9Y4G8 1499 aa15.53■□□□□ 0.08
MECP2-224ENST00000637917 EEA1Q15075 1411 aa15.53■□□□□ 0.08
MECP2-224ENST00000637917 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
MECP2-224ENST00000637917 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
MECP2-224ENST00000637917 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms