RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
TCF4-276ENST00000635822 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
TCF4-276ENST00000635822 PELP1Q8IZL8 1130 aaKnown RBP18.74■□□□□ 0.59
TCF4-276ENST00000635822 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
TCF4-276ENST00000635822 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
TCF4-276ENST00000635822 MYT1Q01538 1121 aa18.48■□□□□ 0.55
TCF4-276ENST00000635822 SHROOM4Q9ULL8 1493 aa18.38■□□□□ 0.53
TCF4-276ENST00000635822 CENPBP07199 599 aaPredicted RBP18.25■□□□□ 0.51
TCF4-276ENST00000635822 ERICH6Q7L0X2 663 aa18.14■□□□□ 0.49
TCF4-276ENST00000635822 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
TCF4-276ENST00000635822 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
TCF4-276ENST00000635822 ZEB1P37275 1124 aaPredicted RBP17.95■□□□□ 0.46
TCF4-276ENST00000635822 HRCP23327 699 aa17.91■□□□□ 0.46
TCF4-276ENST00000635822 NISCHQ9Y2I1 1504 aa17.87■□□□□ 0.45
TCF4-276ENST00000635822 FAM9AQ8IZU1 332 aaPredicted RBP17.86■□□□□ 0.45
TCF4-276ENST00000635822 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
TCF4-276ENST00000635822 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
TCF4-276ENST00000635822 APLP2Q06481 763 aa17.61■□□□□ 0.41
TCF4-276ENST00000635822 NEFLP07196 543 aa17.55■□□□□ 0.4
TCF4-276ENST00000635822 TRIM26Q12899 539 aaPredicted RBP17.47■□□□□ 0.39
TCF4-276ENST00000635822 GTF3C3Q9Y5Q9 886 aa17.32■□□□□ 0.36
TCF4-276ENST00000635822 RANGAP1P46060 587 aaPredicted RBP17.31■□□□□ 0.36
TCF4-276ENST00000635822 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
TCF4-276ENST00000635822 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
TCF4-276ENST00000635822 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
TCF4-276ENST00000635822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
TCF4-276ENST00000635822 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.32
TCF4-276ENST00000635822 BCANQ96GW7 911 aa17.01■□□□□ 0.31
TCF4-276ENST00000635822 DAXXQ9UER7 740 aaPredicted RBP17.01■□□□□ 0.31
TCF4-276ENST00000635822 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
TCF4-276ENST00000635822 ACIN1Q9UKV3 1341 aaKnown RBP16.98■□□□□ 0.31
TCF4-276ENST00000635822 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
TCF4-276ENST00000635822 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
TCF4-276ENST00000635822 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
TCF4-276ENST00000635822 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
TCF4-276ENST00000635822 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
TCF4-276ENST00000635822 ITGAEP38570 1179 aa16.76■□□□□ 0.27
TCF4-276ENST00000635822 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
TCF4-276ENST00000635822 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
TCF4-276ENST00000635822 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
TCF4-276ENST00000635822 NEUROD1Q13562 356 aa16.68■□□□□ 0.26
TCF4-276ENST00000635822 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
TCF4-276ENST00000635822 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
TCF4-276ENST00000635822 FKBP8Q14318 412 aa16.43■□□□□ 0.22
TCF4-276ENST00000635822 NBR1Q14596 966 aa16.42■□□□□ 0.22
TCF4-276ENST00000635822 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
TCF4-276ENST00000635822 ANP32AP39687 249 aaKnown RBP16.35■□□□□ 0.21
TCF4-276ENST00000635822 ANP32CO43423 234 aa16.34■□□□□ 0.21
TCF4-276ENST00000635822 BCL11AQ9H165 835 aa16.32■□□□□ 0.2
TCF4-276ENST00000635822 ANP32EQ9BTT0 268 aa16.3■□□□□ 0.2
TCF4-276ENST00000635822 GLIPR1L2Q4G1C9 344 aa16.26■□□□□ 0.19
TCF4-276ENST00000635822 MYT1LQ9UL68 1186 aa16.19■□□□□ 0.18
TCF4-276ENST00000635822 MIER1Q8N108 512 aa16.17■□□□□ 0.18
TCF4-276ENST00000635822 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
TCF4-276ENST00000635822 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
TCF4-276ENST00000635822 ARXQ96QS3 562 aa16.09■□□□□ 0.17
TCF4-276ENST00000635822 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
TCF4-276ENST00000635822 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
TCF4-276ENST00000635822 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
TCF4-276ENST00000635822 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
TCF4-276ENST00000635822 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
TCF4-276ENST00000635822 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
TCF4-276ENST00000635822 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
TCF4-276ENST00000635822 ZNF326Q5BKZ1 582 aaKnown RBP15.94■□□□□ 0.14
TCF4-276ENST00000635822 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
TCF4-276ENST00000635822 CCDC136Q96JN2 1154 aa15.9■□□□□ 0.14
TCF4-276ENST00000635822 ANP32BQ92688 251 aaKnown RBP15.89■□□□□ 0.13
TCF4-276ENST00000635822 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
TCF4-276ENST00000635822 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
TCF4-276ENST00000635822 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
TCF4-276ENST00000635822 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
TCF4-276ENST00000635822 SALL2Q9Y467 1007 aaPredicted RBP15.83■□□□□ 0.12
TCF4-276ENST00000635822 DEKP35659 375 aaKnown RBP15.82■□□□□ 0.12
TCF4-276ENST00000635822 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
TCF4-276ENST00000635822 HSP90AA1P07900 732 aaKnown RBP15.77■□□□□ 0.12
TCF4-276ENST00000635822 HIRIP3Q9BW71 556 aaPredicted RBP15.77■□□□□ 0.12
TCF4-276ENST00000635822 NEFMP07197 916 aa15.75■□□□□ 0.11
TCF4-276ENST00000635822 LAS1LQ9Y4W2 734 aaKnown RBP15.73■□□□□ 0.11
TCF4-276ENST00000635822 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
TCF4-276ENST00000635822 NAP1L5Q96NT1 182 aaPredicted RBP15.7■□□□□ 0.1
TCF4-276ENST00000635822 RBM19Q9Y4C8 960 aaKnown RBP15.7■□□□□ 0.1
TCF4-276ENST00000635822 UPF2Q9HAU5 1272 aaKnown RBP15.7■□□□□ 0.1
TCF4-276ENST00000635822 NOP58Q9Y2X3 529 aaKnown RBP15.69■□□□□ 0.1
TCF4-276ENST00000635822 SENP3-EIF4A1A0A087X0R7 540 aa15.64■□□□□ 0.09
TCF4-276ENST00000635822 TRIM44Q96DX7 344 aaPredicted RBP15.63■□□□□ 0.09
TCF4-276ENST00000635822 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
TCF4-276ENST00000635822 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
TCF4-276ENST00000635822 TSHZ2Q9NRE2 1034 aa15.61■□□□□ 0.09
TCF4-276ENST00000635822 TONSLQ96HA7 1378 aa15.61■□□□□ 0.09
TCF4-276ENST00000635822 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
TCF4-276ENST00000635822 TMC1Q8TDI8 760 aa15.57■□□□□ 0.08
TCF4-276ENST00000635822 ARID4BQ4LE39 1312 aaPredicted RBP15.55■□□□□ 0.08
TCF4-276ENST00000635822 B4GALNT3Q6L9W6 998 aa15.55■□□□□ 0.08
TCF4-276ENST00000635822 TNNT2P45379 298 aaPredicted RBP15.54■□□□□ 0.08
TCF4-276ENST00000635822 PPM1GO15355 546 aaPredicted RBP15.53■□□□□ 0.08
TCF4-276ENST00000635822 P3H3Q8IVL6 736 aa15.52■□□□□ 0.08
TCF4-276ENST00000635822 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
TCF4-276ENST00000635822 PPP4R2Q9NY27 417 aa15.48■□□□□ 0.07
TCF4-276ENST00000635822 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
TCF4-276ENST00000635822 BECN1Q14457 450 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms