RNA–Protein interactions for RNA: ENST00000630972.2

HSPH1-209, Transcript of heat shock protein family H (Hsp110) member 1, humanhuman

TSL 1 (best) BASIC

Gene HSPH1, Length 3,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPH1-209ENST00000630972 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.296e-16■■■■■ 58.8
HSPH1-209ENST00000630972 SUB1P53999 127 aaKnown RBP eCLIP8.37□□□□□ -1.073e-8■■■■■ 52.9
HSPH1-209ENST00000630972 SF3B1O75533 1304 aaKnown RBP eCLIP10.78□□□□□ -0.682e-7■■■■■ 49
HSPH1-209ENST00000630972 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.392e-9■■■■■ 38.7
HSPH1-209ENST00000630972 RPS3P23396 243 aaKnown RBP eCLIP10.02□□□□□ -0.813e-6■■■■■ 36
HSPH1-209ENST00000630972 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.87□□□□□ -0.835e-10■■■■■ 32.3
HSPH1-209ENST00000630972 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.07□□□□□ -1.123e-8■■■■■ 32.2
HSPH1-209ENST00000630972 DDX6P26196 483 aaKnown RBP eCLIP10.2□□□□□ -0.785e-7■■■■■ 30
HSPH1-209ENST00000630972 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.711e-12■■■■■ 29
HSPH1-209ENST00000630972 PTBP1P26599 531 aaKnown RBP eCLIP10.14□□□□□ -0.794e-12■■■■■ 26.8
HSPH1-209ENST00000630972 RBM22Q9NW64 420 aaKnown RBP eCLIP10.46□□□□□ -0.742e-6■■■■□ 25.8
HSPH1-209ENST00000630972 TARDBPQ13148 414 aaKnown RBP eCLIP10□□□□□ -0.817e-7■■■■□ 25.5
HSPH1-209ENST00000630972 DDX3XO00571 662 aaKnown RBP eCLIP11.37□□□□□ -0.596e-12■■■■□ 25
HSPH1-209ENST00000630972 EFTUD2Q15029 972 aaKnown RBP eCLIP11.11□□□□□ -0.633e-6■■■■□ 23.5
HSPH1-209ENST00000630972 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.93□□□□□ -0.828e-31■■■□□ 19.1
HSPH1-209ENST00000630972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■■□□ 17.2
HSPH1-209ENST00000630972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.488e-7■■■□□ 16.5
HSPH1-209ENST00000630972 FMR1Q06787 632 aaKnown RBP eCLIP12.02□□□□□ -0.493e-7■■■□□ 15.5
HSPH1-209ENST00000630972 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■□□□ 13.3
HSPH1-209ENST00000630972 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.2□□□□□ -0.463e-7■■□□□ 13.1
HSPH1-209ENST00000630972 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.42□□□□□ -0.584e-8■■□□□ 12.6
HSPH1-209ENST00000630972 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.476e-7■■□□□ 12.4
HSPH1-209ENST00000630972 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.594e-9■□□□□ 11.2
HSPH1-209ENST00000630972 YBX3P16989 372 aaKnown RBP eCLIP10.51□□□□□ -0.739e-7■□□□□ 9
HSPH1-209ENST00000630972 NCBP2P52298 156 aaKnown RBP eCLIP9.8□□□□□ -0.844e-8■□□□□ 8.9
HSPH1-209ENST00000630972 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.195e-6■□□□□ 8.1
Retrieved 26 of 26 RNA–protein pairs in 2.7 ms