RNA–Protein interactions for RNA: ENST00000628613.2

AC009299.3-208, humanhuman

TSL 5

Gene AC009299.3, Length 1,020 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009299.3-208ENST00000628613 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
AC009299.3-208ENST00000628613 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
AC009299.3-208ENST00000628613 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
AC009299.3-208ENST00000628613 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
AC009299.3-208ENST00000628613 FOXD1Q16676 465 aa18.78■□□□□ 0.6
AC009299.3-208ENST00000628613 POTEDQ86YR6 584 aa18.05■□□□□ 0.48
AC009299.3-208ENST00000628613 MSH5O43196 834 aa17.7■□□□□ 0.42
AC009299.3-208ENST00000628613 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
AC009299.3-208ENST00000628613 PPP6R1Q9UPN7 881 aa17.26■□□□□ 0.35
AC009299.3-208ENST00000628613 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
AC009299.3-208ENST00000628613 ADRA2BP18089 450 aa17.14■□□□□ 0.33
AC009299.3-208ENST00000628613 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
AC009299.3-208ENST00000628613 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
AC009299.3-208ENST00000628613 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
AC009299.3-208ENST00000628613 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
AC009299.3-208ENST00000628613 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
AC009299.3-208ENST00000628613 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
AC009299.3-208ENST00000628613 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
AC009299.3-208ENST00000628613 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
AC009299.3-208ENST00000628613 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
AC009299.3-208ENST00000628613 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
AC009299.3-208ENST00000628613 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
AC009299.3-208ENST00000628613 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
AC009299.3-208ENST00000628613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.12
AC009299.3-208ENST00000628613 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
AC009299.3-208ENST00000628613 NPM3O75607 178 aaKnown RBP14.17□□□□□ -0.14
AC009299.3-208ENST00000628613 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
AC009299.3-208ENST00000628613 POTEHQ6S545 545 aa14.04□□□□□ -0.16
AC009299.3-208ENST00000628613 DSG3P32926 999 aa14□□□□□ -0.17
AC009299.3-208ENST00000628613 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
AC009299.3-208ENST00000628613 CAPN15O75808 1086 aa13.89□□□□□ -0.19
AC009299.3-208ENST00000628613 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
AC009299.3-208ENST00000628613 TRHP20396 242 aaPredicted RBP13.57□□□□□ -0.24
AC009299.3-208ENST00000628613 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
AC009299.3-208ENST00000628613 ABCB7O75027 752 aa13.54□□□□□ -0.24
AC009299.3-208ENST00000628613 KCNA4P22459 653 aa13.51□□□□□ -0.25
AC009299.3-208ENST00000628613 APLP2Q06481 763 aa13.51□□□□□ -0.25
AC009299.3-208ENST00000628613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
AC009299.3-208ENST00000628613 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
AC009299.3-208ENST00000628613 SAMD1Q6SPF0 538 aaPredicted RBP13.35□□□□□ -0.27
AC009299.3-208ENST00000628613 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
AC009299.3-208ENST00000628613 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
AC009299.3-208ENST00000628613 POLA2Q14181 598 aa13.14□□□□□ -0.31
AC009299.3-208ENST00000628613 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.32
AC009299.3-208ENST00000628613 SP7Q8TDD2 431 aaPredicted RBP12.95□□□□□ -0.34
AC009299.3-208ENST00000628613 AKT1S1Q96B36 256 aa12.95□□□□□ -0.34
AC009299.3-208ENST00000628613 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
AC009299.3-208ENST00000628613 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
AC009299.3-208ENST00000628613 PIP4P2Q8N4L2 257 aa12.83□□□□□ -0.36
AC009299.3-208ENST00000628613 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
AC009299.3-208ENST00000628613 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
AC009299.3-208ENST00000628613 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
AC009299.3-208ENST00000628613 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
AC009299.3-208ENST00000628613 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
AC009299.3-208ENST00000628613 HAX1O00165 279 aa12.65□□□□□ -0.38
AC009299.3-208ENST00000628613 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
AC009299.3-208ENST00000628613 EVX2Q03828 476 aa12.55□□□□□ -0.4
AC009299.3-208ENST00000628613 ZBTB22O15209 634 aa12.45□□□□□ -0.42
AC009299.3-208ENST00000628613 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
AC009299.3-208ENST00000628613 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
AC009299.3-208ENST00000628613 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
AC009299.3-208ENST00000628613 ATXN8OSP0DMR3 200 aa12.39□□□□□ -0.43
AC009299.3-208ENST00000628613 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
AC009299.3-208ENST00000628613 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
AC009299.3-208ENST00000628613 FBLN2P98095 1184 aa12.3□□□□□ -0.44
AC009299.3-208ENST00000628613 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
AC009299.3-208ENST00000628613 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
AC009299.3-208ENST00000628613 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
AC009299.3-208ENST00000628613 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
AC009299.3-208ENST00000628613 GABBR2O75899 941 aa12.21□□□□□ -0.45
AC009299.3-208ENST00000628613 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
AC009299.3-208ENST00000628613 LHX8Q68G74 356 aa12.14□□□□□ -0.47
AC009299.3-208ENST00000628613 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
AC009299.3-208ENST00000628613 PRR29P0C7W0 189 aa12□□□□□ -0.49
AC009299.3-208ENST00000628613 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
AC009299.3-208ENST00000628613 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC009299.3-208ENST00000628613 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
AC009299.3-208ENST00000628613 FARP1Q9Y4F1 1045 aaPredicted RBP11.9□□□□□ -0.5
AC009299.3-208ENST00000628613 CLCN6P51797 869 aa11.86□□□□□ -0.51
AC009299.3-208ENST00000628613 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
AC009299.3-208ENST00000628613 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
AC009299.3-208ENST00000628613 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
AC009299.3-208ENST00000628613 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
AC009299.3-208ENST00000628613 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
AC009299.3-208ENST00000628613 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
AC009299.3-208ENST00000628613 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
AC009299.3-208ENST00000628613 OTUD5Q96G74 571 aa11.61□□□□□ -0.55
AC009299.3-208ENST00000628613 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
AC009299.3-208ENST00000628613 STAG3Q9UJ98 1225 aa11.55□□□□□ -0.56
AC009299.3-208ENST00000628613 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
AC009299.3-208ENST00000628613 PHF12Q96QT6 1004 aa11.49□□□□□ -0.57
AC009299.3-208ENST00000628613 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
AC009299.3-208ENST00000628613 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
AC009299.3-208ENST00000628613 POTEMA6NI47 508 aa11.44□□□□□ -0.58
AC009299.3-208ENST00000628613 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
AC009299.3-208ENST00000628613 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
AC009299.3-208ENST00000628613 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
AC009299.3-208ENST00000628613 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
AC009299.3-208ENST00000628613 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
AC009299.3-208ENST00000628613 POTEJP0CG39 1038 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms