RNA–Protein interactions for RNA: ENST00000628266.1
Retrieved 4 of 4 RNA–protein pairs in 2.6 ms
HGH1-207, Transcript of HGH1 homolog, human
TSL 5 BASIC
Gene HGH1, Length 258 nt, Biotype protein coding, Subcellular localisation Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
HGH1-207 | ENST00000628266 | HNRNPM | P52272 | 730 aa | Known RBP eCLIP | 41.7 | ■■■■■ 4.27 | 3e-14 | ■■■■■ 47.1 |
HGH1-207 | ENST00000628266 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 26.56 | ■■□□□ 1.84 | 4e-19 | ■■■■■ 31.5 |
HGH1-207 | ENST00000628266 | XPO5 | Q9HAV4 | 1204 aa | Known RBP eCLIP | 31.94 | ■■■□□ 2.7 | 2e-7 | ■■■□□ 15.1 |
HGH1-207 | ENST00000628266 | NIPBL | Q6KC79 | 2804 aa | eCLIP | 23.01 | ■■□□□ 1.27 | 7e-6 | ■□□□□ 10.5 |