RNA–Protein interactions for RNA: ENST00000628003.2

LINC00969-300, human

TSL 5

Gene LINC00969, Length 511 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00969-300	ENST00000628003	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.61	■□□□□ 0.57
LINC00969-300	ENST00000628003	CHIC1	Q5VXU3	224 aa		17.93	■□□□□ 0.46
LINC00969-300	ENST00000628003	NISCH	Q9Y2I1	1504 aa		16.69	■□□□□ 0.26
LINC00969-300	ENST00000628003	SENP3	Q9H4L4	574 aa	Predicted RBP	15.9	■□□□□ 0.14
LINC00969-300	ENST00000628003	PHF23	Q9BUL5	403 aa	Predicted RBP	15.7	■□□□□ 0.1
LINC00969-300	ENST00000628003	ABCC9	O60706	1549 aa		15.47	■□□□□ 0.07
LINC00969-300	ENST00000628003	CCDC180	Q9P1Z9	1646 aa		15.2	■□□□□ 0.02
LINC00969-300	ENST00000628003	FOXD1	Q16676	465 aa		14.75	□□□□□ -0.05
LINC00969-300	ENST00000628003	DNAJC5B	Q9UF47	199 aa		14.69	□□□□□ -0.06
LINC00969-300	ENST00000628003	RB1CC1	Q8TDY2	1594 aa		14.62	□□□□□ -0.07
LINC00969-300	ENST00000628003	PLPPR3	Q6T4P5	718 aa		14.45	□□□□□ -0.1
LINC00969-300	ENST00000628003	NACAD	O15069	1562 aa		14.41	□□□□□ -0.1
LINC00969-300	ENST00000628003	PABPN1	Q86U42	306 aa	Known RBP eCLIP	14.3	□□□□□ -0.12
LINC00969-300	ENST00000628003	UNC13A	Q9UPW8	1703 aa		14.29	□□□□□ -0.12
LINC00969-300	ENST00000628003	DCAF8L2	P0C7V8	631 aa		14.25	□□□□□ -0.13
LINC00969-300	ENST00000628003	BICRA	Q9NZM4	1560 aa		14.13	□□□□□ -0.15
LINC00969-300	ENST00000628003	MYO15B	Q96JP2	1530 aa		14.07	□□□□□ -0.16
LINC00969-300	ENST00000628003	CC2D2A	Q9P2K1	1620 aa		13.97	□□□□□ -0.17
LINC00969-300	ENST00000628003	CECR2	Q9BXF3	1484 aa		13.97	□□□□□ -0.17
LINC00969-300	ENST00000628003	SHROOM4	Q9ULL8	1493 aa		13.97	□□□□□ -0.17
LINC00969-300	ENST00000628003	PPP6R1	Q9UPN7	881 aa		13.94	□□□□□ -0.18
LINC00969-300	ENST00000628003	ADRA2B	P18089	450 aa		13.92	□□□□□ -0.18
LINC00969-300	ENST00000628003	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC00969-300	ENST00000628003	EIF4G1	Q04637	1599 aa	Known RBP	13.85	□□□□□ -0.19
LINC00969-300	ENST00000628003	SCRIB	Q14160	1630 aa		13.82	□□□□□ -0.2
LINC00969-300	ENST00000628003	DNAJC5	Q9H3Z4	198 aa		13.79	□□□□□ -0.2
LINC00969-300	ENST00000628003	MSH5	O43196	834 aa		13.77	□□□□□ -0.21
LINC00969-300	ENST00000628003	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.77	□□□□□ -0.21
LINC00969-300	ENST00000628003	DCAF1	Q9Y4B6	1507 aa		13.77	□□□□□ -0.21
LINC00969-300	ENST00000628003	CUX2	O14529	1486 aa		13.48	□□□□□ -0.25
LINC00969-300	ENST00000628003	ERCC6	Q03468	1493 aa		13.43	□□□□□ -0.26
LINC00969-300	ENST00000628003	NCAPD3	P42695	1498 aa		13.25	□□□□□ -0.29
LINC00969-300	ENST00000628003	SMARCA2	P51531	1590 aa		13.19	□□□□□ -0.3
LINC00969-300	ENST00000628003	HMGXB3	Q12766	1538 aa		13.18	□□□□□ -0.3
LINC00969-300	ENST00000628003	ATAD2B	Q9ULI0	1458 aa		13.18	□□□□□ -0.3
LINC00969-300	ENST00000628003	NES	P48681	1621 aa		13.17	□□□□□ -0.3
LINC00969-300	ENST00000628003	THOC2	Q8NI27	1593 aa	Known RBP	13.15	□□□□□ -0.3
LINC00969-300	ENST00000628003	SMARCA4	P51532	1647 aa		13.13	□□□□□ -0.31
LINC00969-300	ENST00000628003	TRIM41	Q8WV44	630 aa		13.11	□□□□□ -0.31
LINC00969-300	ENST00000628003	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.09	□□□□□ -0.31
LINC00969-300	ENST00000628003	LAMC3	Q9Y6N6	1575 aa		13.07	□□□□□ -0.32
LINC00969-300	ENST00000628003	KIF21A	Q7Z4S6	1674 aa		13.05	□□□□□ -0.32
LINC00969-300	ENST00000628003	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.02	□□□□□ -0.33
LINC00969-300	ENST00000628003	POTED	Q86YR6	584 aa		13.01	□□□□□ -0.33
LINC00969-300	ENST00000628003	PDS5B	Q9NTI5	1447 aa		12.99	□□□□□ -0.33
LINC00969-300	ENST00000628003	PEG3	Q9GZU2	1588 aa		12.97	□□□□□ -0.33
LINC00969-300	ENST00000628003	MRC2	Q9UBG0	1479 aa		12.91	□□□□□ -0.34
LINC00969-300	ENST00000628003	WDR62	O43379	1518 aa		12.88	□□□□□ -0.35
LINC00969-300	ENST00000628003	MROH2B	Q7Z745	1585 aa		12.85	□□□□□ -0.35
LINC00969-300	ENST00000628003	CADPS	Q9ULU8	1353 aa		12.84	□□□□□ -0.35
LINC00969-300	ENST00000628003	CEP164	Q9UPV0	1460 aa		12.81	□□□□□ -0.36
LINC00969-300	ENST00000628003	SCAF1	Q9H7N4	1312 aa	Known RBP	12.81	□□□□□ -0.36
LINC00969-300	ENST00000628003	OSCAR	Q8IYS5	282 aa		12.78	□□□□□ -0.36
LINC00969-300	ENST00000628003	FANCD2	Q9BXW9	1451 aa		12.73	□□□□□ -0.37
LINC00969-300	ENST00000628003	WIZ	O95785	1651 aa		12.71	□□□□□ -0.37
LINC00969-300	ENST00000628003	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.71	□□□□□ -0.37
LINC00969-300	ENST00000628003	RIMBP3C	A6NJZ7	1639 aa		12.7	□□□□□ -0.38
LINC00969-300	ENST00000628003	RIMBP3B	A6NNM3	1639 aa		12.7	□□□□□ -0.38
LINC00969-300	ENST00000628003	RIMBP3	Q9UFD9	1639 aa		12.7	□□□□□ -0.38
LINC00969-300	ENST00000628003	PPP4R3CP	Q6ZMV5	832 aa		12.67	□□□□□ -0.38
LINC00969-300	ENST00000628003	DMRT2	Q9Y5R5	561 aa		12.63	□□□□□ -0.39
LINC00969-300	ENST00000628003	CFTR	P13569	1480 aa		12.63	□□□□□ -0.39
LINC00969-300	ENST00000628003	URB2	Q14146	1524 aa	Known RBP	12.62	□□□□□ -0.39
LINC00969-300	ENST00000628003	ARHGEF11	O15085	1522 aa		12.61	□□□□□ -0.39
LINC00969-300	ENST00000628003	PRDM2	Q13029	1718 aa		12.6	□□□□□ -0.39
LINC00969-300	ENST00000628003	IFT140	Q96RY7	1462 aa		12.54	□□□□□ -0.4
LINC00969-300	ENST00000628003	TOP2A	P11388	1531 aa	Known RBP	12.53	□□□□□ -0.4
LINC00969-300	ENST00000628003	ZNF608	Q9ULD9	1512 aa	Predicted RBP	12.52	□□□□□ -0.4
LINC00969-300	ENST00000628003	TRH	P20396	242 aa	Predicted RBP	12.52	□□□□□ -0.41
LINC00969-300	ENST00000628003	CYB5RL	Q6IPT4	315 aa		12.5	□□□□□ -0.41
LINC00969-300	ENST00000628003	EIF4G3	O43432	1585 aa	Known RBP	12.5	□□□□□ -0.41
LINC00969-300	ENST00000628003	CHD1	O14646	1710 aa		12.49	□□□□□ -0.41
LINC00969-300	ENST00000628003	TOPBP1	Q92547	1522 aa		12.45	□□□□□ -0.42
LINC00969-300	ENST00000628003	ARAP1	Q96P48	1450 aa		12.44	□□□□□ -0.42
LINC00969-300	ENST00000628003	RSF1	Q96T23	1441 aa	Predicted RBP	12.44	□□□□□ -0.42
LINC00969-300	ENST00000628003	ABCC8	Q09428	1581 aa		12.43	□□□□□ -0.42
LINC00969-300	ENST00000628003	CNKSR2	Q8WXI2	1034 aa		12.41	□□□□□ -0.42
LINC00969-300	ENST00000628003	DNMBP	Q6XZF7	1577 aa		12.4	□□□□□ -0.42
LINC00969-300	ENST00000628003	FBLN2	P98095	1184 aa		12.4	□□□□□ -0.42
LINC00969-300	ENST00000628003	TARBP1	Q13395	1621 aa	Known RBP	12.37	□□□□□ -0.43
LINC00969-300	ENST00000628003	AQR	O60306	1485 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
LINC00969-300	ENST00000628003	CCDC88B	A6NC98	1476 aa		12.35	□□□□□ -0.43
LINC00969-300	ENST00000628003	NCBP3	Q53F19	620 aa	Known RBP	12.3	□□□□□ -0.44
LINC00969-300	ENST00000628003	SYNJ1	O43426	1573 aa		12.3	□□□□□ -0.44
LINC00969-300	ENST00000628003	POLA1	P09884	1462 aa	Predicted RBP	12.29	□□□□□ -0.44
LINC00969-300	ENST00000628003	CLASP1	Q7Z460	1538 aa		12.27	□□□□□ -0.44
LINC00969-300	ENST00000628003	SNAPC4	Q5SXM2	1469 aa		12.27	□□□□□ -0.45
LINC00969-300	ENST00000628003	WDR97	A6NE52	1622 aa		12.26	□□□□□ -0.45
LINC00969-300	ENST00000628003	HOXD11	P31277	338 aa	Predicted RBP	12.25	□□□□□ -0.45
LINC00969-300	ENST00000628003	RNF216	Q9NWF9	866 aa	Predicted RBP	12.24	□□□□□ -0.45
LINC00969-300	ENST00000628003	RAD54L2	Q9Y4B4	1467 aa		12.24	□□□□□ -0.45
LINC00969-300	ENST00000628003	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.23	□□□□□ -0.45
LINC00969-300	ENST00000628003	TDRD9	Q8NDG6	1382 aa	Known RBP	12.23	□□□□□ -0.45
LINC00969-300	ENST00000628003	CHMP7	Q8WUX9	453 aa	Predicted RBP	12.23	□□□□□ -0.45
LINC00969-300	ENST00000628003	SOGA1	O94964	1423 aa		12.22	□□□□□ -0.45
LINC00969-300	ENST00000628003	SYNJ2	O15056	1496 aa		12.18	□□□□□ -0.46
LINC00969-300	ENST00000628003	GRIN2B	Q13224	1484 aa		12.18	□□□□□ -0.46
LINC00969-300	ENST00000628003	GAPVD1	Q14C86	1478 aa		12.18	□□□□□ -0.46
LINC00969-300	ENST00000628003	FGD5	Q6ZNL6	1462 aa		12.18	□□□□□ -0.46
LINC00969-300	ENST00000628003	PBRM1	Q86U86	1689 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms