RNA–Protein interactions for RNA: ENST00000627356.2

LINC00969-287, human

TSL 5

Gene LINC00969, Length 519 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00969-287	ENST00000627356	CHIC1	Q5VXU3	224 aa		15.46	■□□□□ 0.07
LINC00969-287	ENST00000627356	AEBP2	Q6ZN18	517 aa	Predicted RBP	15.46	■□□□□ 0.07
LINC00969-287	ENST00000627356	NISCH	Q9Y2I1	1504 aa		14.41	□□□□□ -0.1
LINC00969-287	ENST00000627356	PHF23	Q9BUL5	403 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC00969-287	ENST00000627356	SENP3	Q9H4L4	574 aa	Predicted RBP	13.17	□□□□□ -0.3
LINC00969-287	ENST00000627356	ABCC9	O60706	1549 aa		13.08	□□□□□ -0.32
LINC00969-287	ENST00000627356	CCDC180	Q9P1Z9	1646 aa		12.97	□□□□□ -0.33
LINC00969-287	ENST00000627356	PLPPR3	Q6T4P5	718 aa		12.75	□□□□□ -0.37
LINC00969-287	ENST00000627356	RB1CC1	Q8TDY2	1594 aa		12.42	□□□□□ -0.42
LINC00969-287	ENST00000627356	DNAJC5B	Q9UF47	199 aa		12.37	□□□□□ -0.43
LINC00969-287	ENST00000627356	NACAD	O15069	1562 aa		12.31	□□□□□ -0.44
LINC00969-287	ENST00000627356	DCAF8L2	P0C7V8	631 aa		12.25	□□□□□ -0.45
LINC00969-287	ENST00000627356	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
LINC00969-287	ENST00000627356	FOXD1	Q16676	465 aa		12.13	□□□□□ -0.47
LINC00969-287	ENST00000627356	MYO15B	Q96JP2	1530 aa		12.11	□□□□□ -0.47
LINC00969-287	ENST00000627356	UNC13A	Q9UPW8	1703 aa		12.08	□□□□□ -0.47
LINC00969-287	ENST00000627356	BICRA	Q9NZM4	1560 aa		12.02	□□□□□ -0.49
LINC00969-287	ENST00000627356	ADRA2B	P18089	450 aa		11.94	□□□□□ -0.5
LINC00969-287	ENST00000627356	DCAF1	Q9Y4B6	1507 aa		11.91	□□□□□ -0.5
LINC00969-287	ENST00000627356	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.9	□□□□□ -0.5
LINC00969-287	ENST00000627356	SHROOM4	Q9ULL8	1493 aa		11.9	□□□□□ -0.5
LINC00969-287	ENST00000627356	PPP6R1	Q9UPN7	881 aa		11.9	□□□□□ -0.5
LINC00969-287	ENST00000627356	CECR2	Q9BXF3	1484 aa		11.81	□□□□□ -0.52
LINC00969-287	ENST00000627356	CC2D2A	Q9P2K1	1620 aa		11.8	□□□□□ -0.52
LINC00969-287	ENST00000627356	SCRIB	Q14160	1630 aa		11.79	□□□□□ -0.52
LINC00969-287	ENST00000627356	EIF4G1	Q04637	1599 aa	Known RBP	11.75	□□□□□ -0.53
LINC00969-287	ENST00000627356	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.57	□□□□□ -0.56
LINC00969-287	ENST00000627356	DNAJC5	Q9H3Z4	198 aa		11.48	□□□□□ -0.57
LINC00969-287	ENST00000627356	NCAPD3	P42695	1498 aa		11.38	□□□□□ -0.59
LINC00969-287	ENST00000627356	CUX2	O14529	1486 aa		11.34	□□□□□ -0.59
LINC00969-287	ENST00000627356	ERCC6	Q03468	1493 aa		11.32	□□□□□ -0.6
LINC00969-287	ENST00000627356	KCNA4	P22459	653 aa		11.31	□□□□□ -0.6
LINC00969-287	ENST00000627356	ATAD2B	Q9ULI0	1458 aa		11.3	□□□□□ -0.6
LINC00969-287	ENST00000627356	SMARCA2	P51531	1590 aa		11.28	□□□□□ -0.6
LINC00969-287	ENST00000627356	HMGXB3	Q12766	1538 aa		11.26	□□□□□ -0.61
LINC00969-287	ENST00000627356	SMARCA4	P51532	1647 aa		11.25	□□□□□ -0.61
LINC00969-287	ENST00000627356	PPP4R3CP	Q6ZMV5	832 aa		11.25	□□□□□ -0.61
LINC00969-287	ENST00000627356	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.2	□□□□□ -0.62
LINC00969-287	ENST00000627356	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.2	□□□□□ -0.62
LINC00969-287	ENST00000627356	NES	P48681	1621 aa		11.19	□□□□□ -0.62
LINC00969-287	ENST00000627356	PEG3	Q9GZU2	1588 aa		11.16	□□□□□ -0.62
LINC00969-287	ENST00000627356	MSH5	O43196	834 aa		11.13	□□□□□ -0.63
LINC00969-287	ENST00000627356	NCBP3	Q53F19	620 aa	Known RBP	11.12	□□□□□ -0.63
LINC00969-287	ENST00000627356	LAMC3	Q9Y6N6	1575 aa		11.11	□□□□□ -0.63
LINC00969-287	ENST00000627356	MROH2B	Q7Z745	1585 aa		11.09	□□□□□ -0.63
LINC00969-287	ENST00000627356	THOC2	Q8NI27	1593 aa	Known RBP	11.09	□□□□□ -0.63
LINC00969-287	ENST00000627356	PDS5B	Q9NTI5	1447 aa		11.09	□□□□□ -0.63
LINC00969-287	ENST00000627356	KIF21A	Q7Z4S6	1674 aa		11.03	□□□□□ -0.64
LINC00969-287	ENST00000627356	SCAF1	Q9H7N4	1312 aa	Known RBP	11.03	□□□□□ -0.64
LINC00969-287	ENST00000627356	CADPS	Q9ULU8	1353 aa		11.03	□□□□□ -0.64
LINC00969-287	ENST00000627356	MRC2	Q9UBG0	1479 aa		10.98	□□□□□ -0.65
LINC00969-287	ENST00000627356	WIZ	O95785	1651 aa		10.94	□□□□□ -0.66
LINC00969-287	ENST00000627356	WDR62	O43379	1518 aa		10.94	□□□□□ -0.66
LINC00969-287	ENST00000627356	EHMT2	Q96KQ7	1210 aa		10.93	□□□□□ -0.66
LINC00969-287	ENST00000627356	TRIM41	Q8WV44	630 aa		10.91	□□□□□ -0.66
LINC00969-287	ENST00000627356	CEP164	Q9UPV0	1460 aa		10.91	□□□□□ -0.66
LINC00969-287	ENST00000627356	FANCD2	Q9BXW9	1451 aa		10.88	□□□□□ -0.67
LINC00969-287	ENST00000627356	CNKSR2	Q8WXI2	1034 aa		10.88	□□□□□ -0.67
LINC00969-287	ENST00000627356	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.88	□□□□□ -0.67
LINC00969-287	ENST00000627356	CFTR	P13569	1480 aa		10.87	□□□□□ -0.67
LINC00969-287	ENST00000627356	NPM3	O75607	178 aa	Known RBP	10.86	□□□□□ -0.67
LINC00969-287	ENST00000627356	OSCAR	Q8IYS5	282 aa		10.84	□□□□□ -0.67
LINC00969-287	ENST00000627356	RSF1	Q96T23	1441 aa	Predicted RBP	10.84	□□□□□ -0.67
LINC00969-287	ENST00000627356	TOP2A	P11388	1531 aa	Known RBP	10.81	□□□□□ -0.68
LINC00969-287	ENST00000627356	URB2	Q14146	1524 aa	Known RBP	10.79	□□□□□ -0.68
LINC00969-287	ENST00000627356	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.73	□□□□□ -0.69
LINC00969-287	ENST00000627356	PRDM2	Q13029	1718 aa		10.72	□□□□□ -0.69
LINC00969-287	ENST00000627356	IFT140	Q96RY7	1462 aa		10.71	□□□□□ -0.69
LINC00969-287	ENST00000627356	CCDC88B	A6NC98	1476 aa		10.7	□□□□□ -0.7
LINC00969-287	ENST00000627356	ABCC8	Q09428	1581 aa		10.67	□□□□□ -0.7
LINC00969-287	ENST00000627356	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.67	□□□□□ -0.7
LINC00969-287	ENST00000627356	TOPBP1	Q92547	1522 aa		10.66	□□□□□ -0.7
LINC00969-287	ENST00000627356	RIMBP3C	A6NJZ7	1639 aa		10.65	□□□□□ -0.7
LINC00969-287	ENST00000627356	RIMBP3B	A6NNM3	1639 aa		10.65	□□□□□ -0.7
LINC00969-287	ENST00000627356	RIMBP3	Q9UFD9	1639 aa		10.65	□□□□□ -0.7
LINC00969-287	ENST00000627356	DNMBP	Q6XZF7	1577 aa		10.61	□□□□□ -0.71
LINC00969-287	ENST00000627356	CSRNP3	Q8WYN3	585 aa		10.61	□□□□□ -0.71
LINC00969-287	ENST00000627356	ARHGEF11	O15085	1522 aa		10.61	□□□□□ -0.71
LINC00969-287	ENST00000627356	EIF4G3	O43432	1585 aa	Known RBP	10.6	□□□□□ -0.71
LINC00969-287	ENST00000627356	RNF216	Q9NWF9	866 aa	Predicted RBP	10.58	□□□□□ -0.72
LINC00969-287	ENST00000627356	AQR	O60306	1485 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
LINC00969-287	ENST00000627356	CYB5RL	Q6IPT4	315 aa		10.57	□□□□□ -0.72
LINC00969-287	ENST00000627356	TARBP1	Q13395	1621 aa	Known RBP	10.56	□□□□□ -0.72
LINC00969-287	ENST00000627356	FBLN2	P98095	1184 aa		10.56	□□□□□ -0.72
LINC00969-287	ENST00000627356	CHD1	O14646	1710 aa		10.54	□□□□□ -0.72
LINC00969-287	ENST00000627356	POLA1	P09884	1462 aa	Predicted RBP	10.54	□□□□□ -0.72
LINC00969-287	ENST00000627356	DMRT2	Q9Y5R5	561 aa		10.53	□□□□□ -0.72
LINC00969-287	ENST00000627356	SOGA1	O94964	1423 aa		10.52	□□□□□ -0.73
LINC00969-287	ENST00000627356	TDRD9	Q8NDG6	1382 aa	Known RBP	10.51	□□□□□ -0.73
LINC00969-287	ENST00000627356	RAD54L2	Q9Y4B4	1467 aa		10.5	□□□□□ -0.73
LINC00969-287	ENST00000627356	TRH	P20396	242 aa	Predicted RBP	10.5	□□□□□ -0.73
LINC00969-287	ENST00000627356	ARAP1	Q96P48	1450 aa		10.49	□□□□□ -0.73
LINC00969-287	ENST00000627356	WDR97	A6NE52	1622 aa		10.47	□□□□□ -0.73
LINC00969-287	ENST00000627356	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.47	□□□□□ -0.73
LINC00969-287	ENST00000627356	FGD5	Q6ZNL6	1462 aa		10.46	□□□□□ -0.74
LINC00969-287	ENST00000627356	SNAPC4	Q5SXM2	1469 aa		10.45	□□□□□ -0.74
LINC00969-287	ENST00000627356	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.44	□□□□□ -0.74
LINC00969-287	ENST00000627356	GRIN2B	Q13224	1484 aa		10.43	□□□□□ -0.74
LINC00969-287	ENST00000627356	SYNJ1	O43426	1573 aa		10.43	□□□□□ -0.74
LINC00969-287	ENST00000627356	CUX1	P39880	1505 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 139 ms