RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 RUSC2Q8N2Y8 1516 aa44.16■■■■■ 4.66
R3HDM4-208ENST00000626716 CUL7Q14999 1698 aa44.03■■■■■ 4.64
R3HDM4-208ENST00000626716 KIAA0586Q9BVV6 1533 aa44.03■■■■■ 4.64
R3HDM4-208ENST00000626716 NPM1P06748 294 aaKnown RBP eCLIP43.93■■■■■ 4.62
R3HDM4-208ENST00000626716 KIF13AQ9H1H9 1805 aa43.9■■■■■ 4.62
R3HDM4-208ENST00000626716 CARMIL1Q5VZK9 1371 aa43.89■■■■■ 4.62
R3HDM4-208ENST00000626716 AEBP2Q6ZN18 517 aaPredicted RBP43.82■■■■■ 4.61
R3HDM4-208ENST00000626716 ADCY10Q96PN6 1610 aa43.77■■■■■ 4.6
R3HDM4-208ENST00000626716 FAM69CQ0P6D2 419 aa43.77■■■■■ 4.6
R3HDM4-208ENST00000626716 ABCC10Q5T3U5 1492 aa43.74■■■■■ 4.59
R3HDM4-208ENST00000626716 MAPKBP1O60336 1514 aa43.73■■■■■ 4.59
R3HDM4-208ENST00000626716 PTPRGP23470 1445 aa43.66■■■■■ 4.58
R3HDM4-208ENST00000626716 CARMIL2Q6F5E8 1435 aa43.61■■■■■ 4.57
R3HDM4-208ENST00000626716 DIP2BQ9P265 1576 aa43.58■■■■■ 4.57
R3HDM4-208ENST00000626716 TTBK1Q5TCY1 1321 aaPredicted RBP43.57■■■■■ 4.57
R3HDM4-208ENST00000626716 TNIKQ9UKE5 1360 aa43.56■■■■■ 4.56
R3HDM4-208ENST00000626716 IQGAP2Q13576 1575 aa43.55■■■■■ 4.56
R3HDM4-208ENST00000626716 RAPGEF2Q9Y4G8 1499 aa43.45■■■■■ 4.55
R3HDM4-208ENST00000626716 ABCC2Q92887 1545 aa43.38■■■■■ 4.54
R3HDM4-208ENST00000626716 DISP1Q96F81 1524 aa43.37■■■■■ 4.53
R3HDM4-208ENST00000626716 TSPOAP1O95153 1857 aa43.34■■■■■ 4.53
R3HDM4-208ENST00000626716 UHRF1BP1LA0JNW5 1464 aa43.31■■■■■ 4.52
R3HDM4-208ENST00000626716 UACAQ9BZF9 1416 aa43.3■■■■■ 4.52
R3HDM4-208ENST00000626716 UGGT2Q9NYU1 1516 aa43.29■■■■■ 4.52
R3HDM4-208ENST00000626716 ASXL2Q76L83 1435 aa43.25■■■■■ 4.51
R3HDM4-208ENST00000626716 PLB1Q6P1J6 1458 aa43.25■■■■■ 4.51
R3HDM4-208ENST00000626716 KDM6BO15054 1643 aa43.22■■■■■ 4.51
R3HDM4-208ENST00000626716 KIAA0556O60303 1618 aa43.14■■■■■ 4.5
R3HDM4-208ENST00000626716 GLI2P10070 1586 aa43.12■■■■■ 4.49
R3HDM4-208ENST00000626716 KDM5BQ9UGL1 1544 aa43.11■■■■■ 4.49
R3HDM4-208ENST00000626716 CTTNBP2Q8WZ74 1663 aa43.05■■■■■ 4.48
R3HDM4-208ENST00000626716 ZCCHC11Q5TAX3 1644 aaKnown RBP42.99■■■■■ 4.47
R3HDM4-208ENST00000626716 PPRC1Q5VV67 1664 aaKnown RBP42.98■■■■■ 4.47
R3HDM4-208ENST00000626716 EPRSP07814 1512 aaKnown RBP42.98■■■■■ 4.47
R3HDM4-208ENST00000626716 PRXQ9BXM0 1461 aa42.98■■■■■ 4.47
R3HDM4-208ENST00000626716 GOLGA3Q08378 1498 aa42.96■■■■■ 4.47
R3HDM4-208ENST00000626716 KDM4FA0A1W2PPD8 638 aa42.9■■■■■ 4.46
R3HDM4-208ENST00000626716 MAP3K4Q9Y6R4 1608 aa42.86■■■■■ 4.45
R3HDM4-208ENST00000626716 WDR7Q9Y4E6 1490 aa42.81■■■■■ 4.44
R3HDM4-208ENST00000626716 TEX14Q8IWB6 1497 aa42.79■■■■■ 4.44
R3HDM4-208ENST00000626716 ABCA8O94911 1581 aa42.77■■■■■ 4.44
R3HDM4-208ENST00000626716 COL17A1Q9UMD9 1497 aaPredicted RBP42.74■■■■■ 4.43
R3HDM4-208ENST00000626716 CSRNP3Q8WYN3 585 aa42.72■■■■■ 4.43
R3HDM4-208ENST00000626716 FAM9AQ8IZU1 332 aaPredicted RBP42.7■■■■■ 4.43
R3HDM4-208ENST00000626716 KCNH8Q96L42 1107 aa42.68■■■■■ 4.42
R3HDM4-208ENST00000626716 P3H3Q8IVL6 736 aa42.64■■■■■ 4.42
R3HDM4-208ENST00000626716 CD109Q6YHK3 1445 aa42.6■■■■■ 4.41
R3HDM4-208ENST00000626716 CFAP43Q8NDM7 1665 aa42.55■■■■■ 4.4
R3HDM4-208ENST00000626716 MAGI3Q5TCQ9 1506 aa42.54■■■■■ 4.4
R3HDM4-208ENST00000626716 ARID3CA6NKF2 412 aa42.49■■■■■ 4.39
R3HDM4-208ENST00000626716 ADGRL1O94910 1474 aa42.48■■■■■ 4.39
R3HDM4-208ENST00000626716 ATP10BO94823 1461 aa42.47■■■■■ 4.39
R3HDM4-208ENST00000626716 EEA1Q15075 1411 aa42.46■■■■■ 4.39
R3HDM4-208ENST00000626716 SAMD9Q5K651 1589 aa42.44■■■■■ 4.38
R3HDM4-208ENST00000626716 RANGAP1P46060 587 aaPredicted RBP42.3■■■■■ 4.36
R3HDM4-208ENST00000626716 RAPGEF6Q8TEU7 1601 aa42.3■■■■■ 4.36
R3HDM4-208ENST00000626716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.26■■■■■ 4.36
R3HDM4-208ENST00000626716 HNRNPUL2Q1KMD3 747 aaKnown RBP42.26■■■■■ 4.36
R3HDM4-208ENST00000626716 ARAP3Q8WWN8 1544 aa42.22■■■■■ 4.35
R3HDM4-208ENST00000626716 ABCA9Q8IUA7 1624 aa42.21■■■■■ 4.35
R3HDM4-208ENST00000626716 FHOD3Q2V2M9 1422 aa42.18■■■■■ 4.34
R3HDM4-208ENST00000626716 PHLDB1Q86UU1 1377 aa42.17■■■■■ 4.34
R3HDM4-208ENST00000626716 NUP153P49790 1475 aaKnown RBP42.16■■■■■ 4.34
R3HDM4-208ENST00000626716 KIF21BO75037 1637 aa42.09■■■■■ 4.33
R3HDM4-208ENST00000626716 PLEKHD1A6NEE1 506 aa42.05■■■■■ 4.32
R3HDM4-208ENST00000626716 NEO1Q92859 1461 aa42.04■■■■■ 4.32
R3HDM4-208ENST00000626716 EFCAB5A4FU69 1503 aa42.01■■■■■ 4.32
R3HDM4-208ENST00000626716 RAPGEF3O95398 923 aa42.01■■■■■ 4.32
R3HDM4-208ENST00000626716 HECW2Q9P2P5 1572 aa41.89■■■■■ 4.3
R3HDM4-208ENST00000626716 UBTFP17480 764 aaKnown RBP41.89■■■■■ 4.3
R3HDM4-208ENST00000626716 CHIC1Q5VXU3 224 aa41.86■■■■■ 4.29
R3HDM4-208ENST00000626716 EHMT2Q96KQ7 1210 aa41.86■■■■■ 4.29
R3HDM4-208ENST00000626716 FRMPD1Q5SYB0 1578 aa41.79■■■■■ 4.28
R3HDM4-208ENST00000626716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.79■■■■■ 4.285e-6■□□□□ 9.5
R3HDM4-208ENST00000626716 AKNAQ7Z591 1439 aa41.77■■■■■ 4.28
R3HDM4-208ENST00000626716 FANCAO15360 1455 aa41.74■■■■■ 4.27
R3HDM4-208ENST00000626716 DENND4BO75064 1496 aaPredicted RBP41.74■■■■■ 4.27
R3HDM4-208ENST00000626716 CDK13Q14004 1512 aaKnown RBP41.73■■■■■ 4.27
R3HDM4-208ENST00000626716 ADAMTSL3P82987 1691 aa41.71■■■■■ 4.27
R3HDM4-208ENST00000626716 ARID4BQ4LE39 1312 aaPredicted RBP41.7■■■■■ 4.27
R3HDM4-208ENST00000626716 ATP1B4Q9UN42 357 aaPredicted RBP41.7■■■■■ 4.27
R3HDM4-208ENST00000626716 CFAP74Q9C0B2 1584 aa41.7■■■■■ 4.27
R3HDM4-208ENST00000626716 FMN1Q68DA7 1419 aa41.69■■■■■ 4.27
R3HDM4-208ENST00000626716 TTC37Q6PGP7 1564 aa41.68■■■■■ 4.26
R3HDM4-208ENST00000626716 RICTORQ6R327 1708 aa41.66■■■■■ 4.26
R3HDM4-208ENST00000626716 PTPRMP28827 1452 aa41.65■■■■■ 4.26
R3HDM4-208ENST00000626716 ARHGAP35Q9NRY4 1499 aa41.65■■■■■ 4.26
R3HDM4-208ENST00000626716 ILDR1Q86SU0 546 aaPredicted RBP41.64■■■■■ 4.26
R3HDM4-208ENST00000626716 BCORL1Q5H9F3 1711 aa41.61■■■■■ 4.25
R3HDM4-208ENST00000626716 CDK11AQ9UQ88 783 aaPredicted RBP41.58■■■■■ 4.25
R3HDM4-208ENST00000626716 ARHGEF40Q8TER5 1519 aa41.58■■■■■ 4.25
R3HDM4-208ENST00000626716 HECW1Q76N89 1606 aa41.58■■■■■ 4.25
R3HDM4-208ENST00000626716 PLCH2O75038 1416 aa41.57■■■■■ 4.25
R3HDM4-208ENST00000626716 ZMYM4Q5VZL5 1548 aa41.5■■■■■ 4.23
R3HDM4-208ENST00000626716 MADDQ8WXG6 1647 aa41.5■■■■■ 4.23
R3HDM4-208ENST00000626716 SCAPERQ9BY12 1400 aa41.48■■■■■ 4.23
R3HDM4-208ENST00000626716 MAGI2Q86UL8 1455 aa41.47■■■■■ 4.23
R3HDM4-208ENST00000626716 EFCAB2Q5VUJ9 269 aa41.46■■■■■ 4.23
R3HDM4-208ENST00000626716 ZFYVE16Q7Z3T8 1539 aa41.44■■■■■ 4.22
R3HDM4-208ENST00000626716 YEATS2Q9ULM3 1422 aa41.43■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms