RNA–Protein interactions for RNA: ENST00000625103.1
Retrieved 9 of 9 RNA–protein pairs in 7.8 ms
ABCA2-224, Transcript of ATP binding cassette subfamily A member 2, human
TSL 3
Gene ABCA2, Length 371 nt, Biotype protein coding, Subcellular localisation Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
ABCA2-224 | ENST00000625103 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 15.35 | ■□□□□ 0.05 | 1e-11 | ■■■■□ 19.4 |
ABCA2-224 | ENST00000625103 | PTBP1 | P26599 | 531 aa | Known RBP eCLIP | 11.35 | □□□□□ -0.59 | 2e-11 | ■■■■■ 27.6 |
ABCA2-224 | ENST00000625103 | SF3B1 | O75533 | 1304 aa | Known RBP eCLIP | 17.15 | ■□□□□ 0.34 | 3e-9 | ■■■■■ 206.8 |
ABCA2-224 | ENST00000625103 | BUD13 | Q9BRD0 | 619 aa | Known RBP eCLIP | 18.58 | ■□□□□ 0.56 | 7e-9 | ■■■□□ 17.2 |
ABCA2-224 | ENST00000625103 | UTP3 | Q9NQZ2 | 479 aa | Known RBP eCLIP | 16.29 | ■□□□□ 0.2 | 7e-8 | ■■■■■ 186.3 |
ABCA2-224 | ENST00000625103 | PPIG | Q13427 | 754 aa | Known RBP eCLIP | 18.46 | ■□□□□ 0.55 | 1e-6 | ■■■□□ 18.3 |
ABCA2-224 | ENST00000625103 | RBFOX2 | O43251 | 390 aa | Known RBP eCLIP | 11.32 | □□□□□ -0.6 | 2e-6 | ■■□□□ 14.2 |
ABCA2-224 | ENST00000625103 | PCBP1 | Q15365 | 356 aa | Known RBP eCLIP | 17.21 | ■□□□□ 0.35 | 8e-6 | ■■■■■ 32.8 |
ABCA2-224 | ENST00000625103 | U2AF2 | P26368 | 475 aa | Known RBP eCLIP | 16.9 | ■□□□□ 0.3 | 8e-6 | ■■■■□ 25 |