RNA–Protein interactions for RNA: ENST00000624545.1

AF001548.3-201, humanhuman

BASIC

Gene AF001548.3, Length 1,743 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF001548.3-201ENST00000624545 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
AF001548.3-201ENST00000624545 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
AF001548.3-201ENST00000624545 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
AF001548.3-201ENST00000624545 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
AF001548.3-201ENST00000624545 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
AF001548.3-201ENST00000624545 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
AF001548.3-201ENST00000624545 ABCC9O60706 1549 aa21.86■■□□□ 1.09
AF001548.3-201ENST00000624545 RB1CC1Q8TDY2 1594 aa20.88■□□□□ 0.93
AF001548.3-201ENST00000624545 NACADO15069 1562 aa20.8■□□□□ 0.92
AF001548.3-201ENST00000624545 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
AF001548.3-201ENST00000624545 FOXD1Q16676 465 aa20.76■□□□□ 0.91
AF001548.3-201ENST00000624545 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
AF001548.3-201ENST00000624545 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
AF001548.3-201ENST00000624545 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
AF001548.3-201ENST00000624545 DCAF1Q9Y4B6 1507 aa20.43■□□□□ 0.86
AF001548.3-201ENST00000624545 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
AF001548.3-201ENST00000624545 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.86
AF001548.3-201ENST00000624545 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
AF001548.3-201ENST00000624545 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
AF001548.3-201ENST00000624545 PLPPR3Q6T4P5 718 aa20.06■□□□□ 0.8
AF001548.3-201ENST00000624545 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
AF001548.3-201ENST00000624545 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
AF001548.3-201ENST00000624545 CC2D2AQ9P2K1 1620 aa19.75■□□□□ 0.75
AF001548.3-201ENST00000624545 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
AF001548.3-201ENST00000624545 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
AF001548.3-201ENST00000624545 ADRA2BP18089 450 aa19.48■□□□□ 0.71
AF001548.3-201ENST00000624545 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
AF001548.3-201ENST00000624545 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
AF001548.3-201ENST00000624545 MSH5O43196 834 aa19.39■□□□□ 0.69
AF001548.3-201ENST00000624545 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
AF001548.3-201ENST00000624545 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
AF001548.3-201ENST00000624545 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
AF001548.3-201ENST00000624545 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
AF001548.3-201ENST00000624545 SMARCA2P51531 1590 aa19.14■□□□□ 0.65
AF001548.3-201ENST00000624545 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
AF001548.3-201ENST00000624545 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
AF001548.3-201ENST00000624545 PEG3Q9GZU2 1588 aa19.05■□□□□ 0.64
AF001548.3-201ENST00000624545 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.64
AF001548.3-201ENST00000624545 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
AF001548.3-201ENST00000624545 WIZO95785 1651 aa18.88■□□□□ 0.61
AF001548.3-201ENST00000624545 NESP48681 1621 aa18.87■□□□□ 0.61
AF001548.3-201ENST00000624545 ERCC6Q03468 1493 aa18.82■□□□□ 0.6
AF001548.3-201ENST00000624545 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
AF001548.3-201ENST00000624545 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
AF001548.3-201ENST00000624545 CUX2O14529 1486 aa18.69■□□□□ 0.58
AF001548.3-201ENST00000624545 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
AF001548.3-201ENST00000624545 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
AF001548.3-201ENST00000624545 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
AF001548.3-201ENST00000624545 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
AF001548.3-201ENST00000624545 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
AF001548.3-201ENST00000624545 CFTRP13569 1480 aa18.48■□□□□ 0.55
AF001548.3-201ENST00000624545 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
AF001548.3-201ENST00000624545 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
AF001548.3-201ENST00000624545 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
AF001548.3-201ENST00000624545 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
AF001548.3-201ENST00000624545 WDR62O43379 1518 aa18.4■□□□□ 0.54
AF001548.3-201ENST00000624545 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
AF001548.3-201ENST00000624545 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
AF001548.3-201ENST00000624545 SUPT5HO00267 1087 aaKnown RBP18.13■□□□□ 0.49
AF001548.3-201ENST00000624545 TOPBP1Q92547 1522 aa18.12■□□□□ 0.49
AF001548.3-201ENST00000624545 DNMBPQ6XZF7 1577 aa18.07■□□□□ 0.48
AF001548.3-201ENST00000624545 ABCC8Q09428 1581 aa18.05■□□□□ 0.48
AF001548.3-201ENST00000624545 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
AF001548.3-201ENST00000624545 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
AF001548.3-201ENST00000624545 TRIM41Q8WV44 630 aa18.01■□□□□ 0.47
AF001548.3-201ENST00000624545 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
AF001548.3-201ENST00000624545 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
AF001548.3-201ENST00000624545 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
AF001548.3-201ENST00000624545 CUX1P39880 1505 aa17.92■□□□□ 0.46
AF001548.3-201ENST00000624545 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
AF001548.3-201ENST00000624545 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
AF001548.3-201ENST00000624545 OSCARQ8IYS5 282 aa17.89■□□□□ 0.45
AF001548.3-201ENST00000624545 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
AF001548.3-201ENST00000624545 SOGA1O94964 1423 aa17.86■□□□□ 0.45
AF001548.3-201ENST00000624545 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
AF001548.3-201ENST00000624545 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
AF001548.3-201ENST00000624545 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
AF001548.3-201ENST00000624545 CHD1O14646 1710 aa17.76■□□□□ 0.43
AF001548.3-201ENST00000624545 WDR97A6NE52 1622 aa17.75■□□□□ 0.43
AF001548.3-201ENST00000624545 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
AF001548.3-201ENST00000624545 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
AF001548.3-201ENST00000624545 FBLN2P98095 1184 aa17.69■□□□□ 0.42
AF001548.3-201ENST00000624545 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
AF001548.3-201ENST00000624545 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
AF001548.3-201ENST00000624545 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
AF001548.3-201ENST00000624545 BIVM-ERCC5R4GMW8 1640 aa17.68■□□□□ 0.42
AF001548.3-201ENST00000624545 ABCA10Q8WWZ4 1543 aa17.68■□□□□ 0.42
AF001548.3-201ENST00000624545 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
AF001548.3-201ENST00000624545 RIMBP3CA6NJZ7 1639 aa17.66■□□□□ 0.42
AF001548.3-201ENST00000624545 RIMBP3BA6NNM3 1639 aa17.66■□□□□ 0.42
AF001548.3-201ENST00000624545 RIMBP3Q9UFD9 1639 aa17.66■□□□□ 0.42
AF001548.3-201ENST00000624545 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
AF001548.3-201ENST00000624545 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
AF001548.3-201ENST00000624545 PBRM1Q86U86 1689 aa17.64■□□□□ 0.42
AF001548.3-201ENST00000624545 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
AF001548.3-201ENST00000624545 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
AF001548.3-201ENST00000624545 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
AF001548.3-201ENST00000624545 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
AF001548.3-201ENST00000624545 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
AF001548.3-201ENST00000624545 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms