RNA–Protein interactions for RNA: ENST00000624360.1

AC009948.5-201, humanhuman

BASIC

Gene AC009948.5, Length 4,406 nt, Biotype TEC, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009948.5-201ENST00000624360 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
AC009948.5-201ENST00000624360 SUPT5HO00267 1087 aaKnown RBP12.9□□□□□ -0.34
AC009948.5-201ENST00000624360 SHROOM4Q9ULL8 1493 aa12.85□□□□□ -0.35
AC009948.5-201ENST00000624360 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
AC009948.5-201ENST00000624360 CCDC180Q9P1Z9 1646 aa12.6□□□□□ -0.39
AC009948.5-201ENST00000624360 ZCCHC6Q5VYS8 1495 aaKnown RBP12.58□□□□□ -0.4
AC009948.5-201ENST00000624360 HRCP23327 699 aa12.57□□□□□ -0.4
AC009948.5-201ENST00000624360 ZEB1P37275 1124 aaPredicted RBP12.5□□□□□ -0.41
AC009948.5-201ENST00000624360 CHIC1Q5VXU3 224 aa12.48□□□□□ -0.41
AC009948.5-201ENST00000624360 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
AC009948.5-201ENST00000624360 PELP1Q8IZL8 1130 aaKnown RBP12.37□□□□□ -0.43
AC009948.5-201ENST00000624360 DCAF1Q9Y4B6 1507 aa12.32□□□□□ -0.44
AC009948.5-201ENST00000624360 TRIM26Q12899 539 aaPredicted RBP12.32□□□□□ -0.44
AC009948.5-201ENST00000624360 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
AC009948.5-201ENST00000624360 MYO15BQ96JP2 1530 aa12.06□□□□□ -0.48
AC009948.5-201ENST00000624360 MYT1Q01538 1121 aa12.06□□□□□ -0.48
AC009948.5-201ENST00000624360 LOC105371045A0A1W2PR82 267 aa12□□□□□ -0.49
AC009948.5-201ENST00000624360 CENPBP07199 599 aaPredicted RBP12□□□□□ -0.49
AC009948.5-201ENST00000624360 PPARGC1BQ86YN6 1023 aaKnown RBP11.93□□□□□ -0.5
AC009948.5-201ENST00000624360 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
AC009948.5-201ENST00000624360 ABCC9O60706 1549 aa11.89□□□□□ -0.51
AC009948.5-201ENST00000624360 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
AC009948.5-201ENST00000624360 RB1CC1Q8TDY2 1594 aa11.82□□□□□ -0.52
AC009948.5-201ENST00000624360 RSF1Q96T23 1441 aaPredicted RBP11.82□□□□□ -0.52
AC009948.5-201ENST00000624360 APLP2Q06481 763 aa11.78□□□□□ -0.52
AC009948.5-201ENST00000624360 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
AC009948.5-201ENST00000624360 NACADO15069 1562 aa11.74□□□□□ -0.53
AC009948.5-201ENST00000624360 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
AC009948.5-201ENST00000624360 EEA1Q15075 1411 aa11.65□□□□□ -0.54
AC009948.5-201ENST00000624360 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
AC009948.5-201ENST00000624360 UBTFP17480 764 aaKnown RBP11.64□□□□□ -0.55
AC009948.5-201ENST00000624360 ACIN1Q9UKV3 1341 aaKnown RBP11.62□□□□□ -0.55
AC009948.5-201ENST00000624360 CLSPNQ9HAW4 1339 aa11.56□□□□□ -0.56
AC009948.5-201ENST00000624360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
AC009948.5-201ENST00000624360 BAZ1AQ9NRL2 1556 aaPredicted RBP11.56□□□□□ -0.56
AC009948.5-201ENST00000624360 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
AC009948.5-201ENST00000624360 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
AC009948.5-201ENST00000624360 TNIKQ9UKE5 1360 aa11.5□□□□□ -0.57
AC009948.5-201ENST00000624360 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
AC009948.5-201ENST00000624360 WRNQ14191 1432 aaPredicted RBP eCLIP11.47□□□□□ -0.57
AC009948.5-201ENST00000624360 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.58
AC009948.5-201ENST00000624360 GOLGA3Q08378 1498 aa11.44□□□□□ -0.58
AC009948.5-201ENST00000624360 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
AC009948.5-201ENST00000624360 TTBK1Q5TCY1 1321 aaPredicted RBP11.43□□□□□ -0.58
AC009948.5-201ENST00000624360 MROH2BQ7Z745 1585 aa11.43□□□□□ -0.58
AC009948.5-201ENST00000624360 CECR2Q9BXF3 1484 aa11.41□□□□□ -0.58
AC009948.5-201ENST00000624360 TOP2AP11388 1531 aaKnown RBP11.39□□□□□ -0.59
AC009948.5-201ENST00000624360 CEP164Q9UPV0 1460 aa11.36□□□□□ -0.59
AC009948.5-201ENST00000624360 NEUROD1Q13562 356 aa11.36□□□□□ -0.59
AC009948.5-201ENST00000624360 YTHDC1Q96MU7 727 aaKnown RBP11.35□□□□□ -0.59
AC009948.5-201ENST00000624360 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
AC009948.5-201ENST00000624360 WIZO95785 1651 aa11.33□□□□□ -0.6
AC009948.5-201ENST00000624360 CLIP1P30622 1438 aa11.29□□□□□ -0.6
AC009948.5-201ENST00000624360 NEFLP07196 543 aa11.29□□□□□ -0.6
AC009948.5-201ENST00000624360 CCDC88BA6NC98 1476 aa11.28□□□□□ -0.6
AC009948.5-201ENST00000624360 SMARCA4P51532 1647 aa11.25□□□□□ -0.61
AC009948.5-201ENST00000624360 BAZ1BQ9UIG0 1483 aaKnown RBP11.24□□□□□ -0.61
AC009948.5-201ENST00000624360 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
AC009948.5-201ENST00000624360 SOGA1O94964 1423 aa11.19□□□□□ -0.62
AC009948.5-201ENST00000624360 SMARCA2P51531 1590 aa11.19□□□□□ -0.62
AC009948.5-201ENST00000624360 ABCC8Q09428 1581 aa11.18□□□□□ -0.62
AC009948.5-201ENST00000624360 RANGAP1P46060 587 aaPredicted RBP11.16□□□□□ -0.62
AC009948.5-201ENST00000624360 KIF21BO75037 1637 aa11.14□□□□□ -0.63
AC009948.5-201ENST00000624360 MIER1Q8N108 512 aa11.13□□□□□ -0.63
AC009948.5-201ENST00000624360 EIF4G1Q04637 1599 aaKnown RBP11.11□□□□□ -0.63
AC009948.5-201ENST00000624360 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
AC009948.5-201ENST00000624360 UNC13AQ9UPW8 1703 aa11.09□□□□□ -0.63
AC009948.5-201ENST00000624360 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
AC009948.5-201ENST00000624360 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
AC009948.5-201ENST00000624360 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
AC009948.5-201ENST00000624360 ANP32CO43423 234 aa11.04□□□□□ -0.64
AC009948.5-201ENST00000624360 ERICH3Q5RHP9 1530 aa11.01□□□□□ -0.65
AC009948.5-201ENST00000624360 ITGAEP38570 1179 aa11□□□□□ -0.65
AC009948.5-201ENST00000624360 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
AC009948.5-201ENST00000624360 PEG3Q9GZU2 1588 aa10.99□□□□□ -0.65
AC009948.5-201ENST00000624360 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
AC009948.5-201ENST00000624360 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
AC009948.5-201ENST00000624360 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
AC009948.5-201ENST00000624360 FHAD1B1AJZ9 1412 aa10.97□□□□□ -0.65
AC009948.5-201ENST00000624360 RUSC2Q8N2Y8 1516 aa10.96□□□□□ -0.65
AC009948.5-201ENST00000624360 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.66
AC009948.5-201ENST00000624360 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
AC009948.5-201ENST00000624360 DHX57Q6P158 1386 aaKnown RBP10.95□□□□□ -0.66
AC009948.5-201ENST00000624360 SUPT16HQ9Y5B9 1047 aaKnown RBP10.93□□□□□ -0.66
AC009948.5-201ENST00000624360 CCER2I3L3R5 266 aa10.92□□□□□ -0.66
AC009948.5-201ENST00000624360 TONSLQ96HA7 1378 aa10.91□□□□□ -0.66
AC009948.5-201ENST00000624360 RRBP1Q9P2E9 1410 aaKnown RBP10.91□□□□□ -0.66
AC009948.5-201ENST00000624360 CDK11AQ9UQ88 783 aaPredicted RBP10.9□□□□□ -0.66
AC009948.5-201ENST00000624360 TOP2BQ02880 1626 aa10.9□□□□□ -0.66
AC009948.5-201ENST00000624360 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
AC009948.5-201ENST00000624360 SETD5Q9C0A6 1442 aa10.9□□□□□ -0.66
AC009948.5-201ENST00000624360 ANP32EQ9BTT0 268 aa10.89□□□□□ -0.67
AC009948.5-201ENST00000624360 PRXQ9BXM0 1461 aa10.86□□□□□ -0.67
AC009948.5-201ENST00000624360 FKBP8Q14318 412 aa10.86□□□□□ -0.67
AC009948.5-201ENST00000624360 ERICH6BQ5W0A0 696 aa10.85□□□□□ -0.67
AC009948.5-201ENST00000624360 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
AC009948.5-201ENST00000624360 MAP3K1Q13233 1512 aa10.83□□□□□ -0.68
AC009948.5-201ENST00000624360 RAB3GAP2Q9H2M9 1393 aa10.82□□□□□ -0.68
AC009948.5-201ENST00000624360 CARMIL1Q5VZK9 1371 aa10.81□□□□□ -0.68
AC009948.5-201ENST00000624360 CUX2O14529 1486 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms