RNA–Protein interactions for RNA: ENST00000621933.1

AL034397.3-202, humanhuman

TSL 1 (best) BASIC

Gene AL034397.3, Length 1,815 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL034397.3-202ENST00000621933 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.5□□□□□ -1.052e-42■■■■■ 701.2
AL034397.3-202ENST00000621933 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.59□□□□□ -1.199e-8■■■■■ 105.9
AL034397.3-202ENST00000621933 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.527e-20■■■■■ 92.3
AL034397.3-202ENST00000621933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.66□□□□□ -0.544e-12■■■■■ 41.6
AL034397.3-202ENST00000621933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.52□□□□□ -1.054e-6■■■■■ 34.2
AL034397.3-202ENST00000621933 CPSF6Q16630 551 aaKnown RBP eCLIP7.72□□□□□ -1.173e-33■■■■■ 32.7
AL034397.3-202ENST00000621933 U2AF1Q01081 240 aaKnown RBP eCLIP10.31□□□□□ -0.766e-7■■■■■ 29.1
AL034397.3-202ENST00000621933 RBM15Q96T37 977 aaKnown RBP eCLIP8.29□□□□□ -1.085e-8■■■■□ 26.5
AL034397.3-202ENST00000621933 RBM22Q9NW64 420 aaKnown RBP eCLIP8.05□□□□□ -1.124e-8■■■■□ 25.4
AL034397.3-202ENST00000621933 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■□ 24.7
AL034397.3-202ENST00000621933 SF3B1O75533 1304 aaKnown RBP eCLIP8.17□□□□□ -1.11e-10■■■■□ 23.2
AL034397.3-202ENST00000621933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.259e-8■■■■□ 23.1
AL034397.3-202ENST00000621933 U2AF2P26368 475 aaKnown RBP eCLIP9.15□□□□□ -0.948e-8■■■■□ 22.2
AL034397.3-202ENST00000621933 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.23□□□□□ -1.093e-12■■■■□ 22
AL034397.3-202ENST00000621933 QKIQ96PU8 341 aaKnown RBP eCLIP8.19□□□□□ -1.11e-33■■■■□ 21
AL034397.3-202ENST00000621933 MATR3P43243 847 aaKnown RBP eCLIP8.57□□□□□ -1.049e-15■■■□□ 19.2
AL034397.3-202ENST00000621933 PTBP1P26599 531 aaKnown RBP eCLIP7.2□□□□□ -1.261e-18■■■□□ 16.5
AL034397.3-202ENST00000621933 TROVE2P10155 538 aaKnown RBP eCLIP8.13□□□□□ -1.114e-9■■■□□ 16.5
AL034397.3-202ENST00000621933 HNRNPKP61978 463 aaKnown RBP eCLIP7.32□□□□□ -1.244e-6■■■□□ 15.4
AL034397.3-202ENST00000621933 TIA1P31483 386 aaKnown RBP eCLIP7.62□□□□□ -1.194e-7■■■□□ 15.1
AL034397.3-202ENST00000621933 ZRANB2O95218 330 aaKnown RBP eCLIP8.67□□□□□ -1.028e-7■■■□□ 14.9
AL034397.3-202ENST00000621933 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.05□□□□□ -1.446e-27■■■□□ 14.8
AL034397.3-202ENST00000621933 LARP4Q71RC2 724 aaKnown RBP eCLIP7.85□□□□□ -1.154e-7■■■□□ 14.8
AL034397.3-202ENST00000621933 PABPC4Q13310 644 aaKnown RBP eCLIP8.75□□□□□ -1.017e-6■■□□□ 14.2
AL034397.3-202ENST00000621933 SF3B4Q15427 424 aaKnown RBP eCLIP7.04□□□□□ -1.287e-10■■□□□ 14.2
AL034397.3-202ENST00000621933 AATFQ9NY61 560 aaKnown RBP eCLIP9.15□□□□□ -0.944e-7■■□□□ 12.8
AL034397.3-202ENST00000621933 NOLC1Q14978 699 aaKnown RBP eCLIP9.08□□□□□ -0.961e-6■■□□□ 12.1
AL034397.3-202ENST00000621933 EFTUD2Q15029 972 aaKnown RBP eCLIP8.19□□□□□ -1.12e-13■■□□□ 11.9
AL034397.3-202ENST00000621933 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.53□□□□□ -1.043e-12■□□□□ 11.1
AL034397.3-202ENST00000621933 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.88□□□□□ -0.995e-7■□□□□ 10.5
AL034397.3-202ENST00000621933 GPKOWQ92917 476 aaPredicted RBP eCLIP9.01□□□□□ -0.971e-6■□□□□ 10.3
AL034397.3-202ENST00000621933 SRSF1Q07955 248 aaKnown RBP eCLIP6.06□□□□□ -1.441e-6■□□□□ 9.8
Retrieved 32 of 32 RNA–protein pairs in 7.6 ms