RNA–Protein interactions for RNA: ENST00000621665.1

GRAMD4P3-201, Transcript of GRAM domain containing 4 pseudogene 3, humanhuman

BASIC

Gene GRAMD4P3, Length 1,669 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4P3-201ENST00000621665 NISCHQ9Y2I1 1504 aa39.29■■■■□ 3.88
GRAMD4P3-201ENST00000621665 CCDC180Q9P1Z9 1646 aa35.06■■■■□ 3.2
GRAMD4P3-201ENST00000621665 ABCC9O60706 1549 aa34.33■■■■□ 3.09
GRAMD4P3-201ENST00000621665 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
GRAMD4P3-201ENST00000621665 NACADO15069 1562 aa33.02■■■□□ 2.88
GRAMD4P3-201ENST00000621665 DCAF8L2P0C7V8 631 aa32.9■■■□□ 2.86
GRAMD4P3-201ENST00000621665 MYO15BQ96JP2 1530 aa32.81■■■□□ 2.84
GRAMD4P3-201ENST00000621665 ZCCHC6Q5VYS8 1495 aaKnown RBP32.69■■■□□ 2.82
GRAMD4P3-201ENST00000621665 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
GRAMD4P3-201ENST00000621665 UNC13AQ9UPW8 1703 aa32.18■■■□□ 2.74
GRAMD4P3-201ENST00000621665 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.72
GRAMD4P3-201ENST00000621665 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
GRAMD4P3-201ENST00000621665 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
GRAMD4P3-201ENST00000621665 SHROOM4Q9ULL8 1493 aa31.83■■■□□ 2.69
GRAMD4P3-201ENST00000621665 DNAJC5BQ9UF47 199 aa31.54■■■□□ 2.64
GRAMD4P3-201ENST00000621665 EIF4G1Q04637 1599 aaKnown RBP31.19■■■□□ 2.58
GRAMD4P3-201ENST00000621665 CC2D2AQ9P2K1 1620 aa31.07■■■□□ 2.57
GRAMD4P3-201ENST00000621665 CECR2Q9BXF3 1484 aa30.93■■■□□ 2.54
GRAMD4P3-201ENST00000621665 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
GRAMD4P3-201ENST00000621665 SMARCA4P51532 1647 aa30.51■■■□□ 2.47
GRAMD4P3-201ENST00000621665 NCAPD3P42695 1498 aa30.44■■■□□ 2.46
GRAMD4P3-201ENST00000621665 SMARCA2P51531 1590 aa30.43■■■□□ 2.46
GRAMD4P3-201ENST00000621665 ATAD2BQ9ULI0 1458 aa30.39■■■□□ 2.45
GRAMD4P3-201ENST00000621665 HMGXB3Q12766 1538 aa30.28■■■□□ 2.44
GRAMD4P3-201ENST00000621665 PEG3Q9GZU2 1588 aa30.25■■■□□ 2.43
GRAMD4P3-201ENST00000621665 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
GRAMD4P3-201ENST00000621665 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
GRAMD4P3-201ENST00000621665 WIZO95785 1651 aa29.87■■■□□ 2.37
GRAMD4P3-201ENST00000621665 RSF1Q96T23 1441 aaPredicted RBP29.84■■■□□ 2.37
GRAMD4P3-201ENST00000621665 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
GRAMD4P3-201ENST00000621665 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
GRAMD4P3-201ENST00000621665 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
GRAMD4P3-201ENST00000621665 NESP48681 1621 aa29.61■■■□□ 2.33
GRAMD4P3-201ENST00000621665 CADPSQ9ULU8 1353 aa29.55■■■□□ 2.32
GRAMD4P3-201ENST00000621665 PDS5BQ9NTI5 1447 aa29.53■■■□□ 2.32
GRAMD4P3-201ENST00000621665 CUX2O14529 1486 aa29.48■■■□□ 2.31
GRAMD4P3-201ENST00000621665 CFTRP13569 1480 aa29.32■■■□□ 2.28
GRAMD4P3-201ENST00000621665 KIF21AQ7Z4S6 1674 aa29.3■■■□□ 2.28
GRAMD4P3-201ENST00000621665 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.27
GRAMD4P3-201ENST00000621665 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
GRAMD4P3-201ENST00000621665 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
GRAMD4P3-201ENST00000621665 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
GRAMD4P3-201ENST00000621665 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
GRAMD4P3-201ENST00000621665 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
GRAMD4P3-201ENST00000621665 WDR62O43379 1518 aa29.06■■■□□ 2.24
GRAMD4P3-201ENST00000621665 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
GRAMD4P3-201ENST00000621665 URB2Q14146 1524 aaKnown RBP28.83■■■□□ 2.21
GRAMD4P3-201ENST00000621665 ABCC8Q09428 1581 aa28.82■■■□□ 2.2
GRAMD4P3-201ENST00000621665 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.18
GRAMD4P3-201ENST00000621665 TOPBP1Q92547 1522 aa28.68■■■□□ 2.18
GRAMD4P3-201ENST00000621665 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
GRAMD4P3-201ENST00000621665 IFT140Q96RY7 1462 aa28.61■■■□□ 2.17
GRAMD4P3-201ENST00000621665 POLA1P09884 1462 aaPredicted RBP28.41■■■□□ 2.14
GRAMD4P3-201ENST00000621665 CUX1P39880 1505 aa28.36■■■□□ 2.13
GRAMD4P3-201ENST00000621665 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
GRAMD4P3-201ENST00000621665 SOGA1O94964 1423 aa28.35■■■□□ 2.13
GRAMD4P3-201ENST00000621665 ZNF608Q9ULD9 1512 aaPredicted RBP28.35■■■□□ 2.13
GRAMD4P3-201ENST00000621665 FGD5Q6ZNL6 1462 aa28.33■■■□□ 2.13
GRAMD4P3-201ENST00000621665 EIF4G3O43432 1585 aaKnown RBP28.29■■■□□ 2.12
GRAMD4P3-201ENST00000621665 WDR97A6NE52 1622 aa28.28■■■□□ 2.12
GRAMD4P3-201ENST00000621665 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
GRAMD4P3-201ENST00000621665 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
GRAMD4P3-201ENST00000621665 WRNQ14191 1432 aaPredicted RBP eCLIP28.21■■■□□ 2.11
GRAMD4P3-201ENST00000621665 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.11
GRAMD4P3-201ENST00000621665 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
GRAMD4P3-201ENST00000621665 TOP2BQ02880 1626 aa28.14■■■□□ 2.09
GRAMD4P3-201ENST00000621665 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
GRAMD4P3-201ENST00000621665 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
GRAMD4P3-201ENST00000621665 GRIN2BQ13224 1484 aa28.06■■■□□ 2.08
GRAMD4P3-201ENST00000621665 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
GRAMD4P3-201ENST00000621665 GAPVD1Q14C86 1478 aa28.02■■■□□ 2.08
GRAMD4P3-201ENST00000621665 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
GRAMD4P3-201ENST00000621665 FBLN2P98095 1184 aa27.97■■■□□ 2.07
GRAMD4P3-201ENST00000621665 SNAPC4Q5SXM2 1469 aa27.97■■■□□ 2.07
GRAMD4P3-201ENST00000621665 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
GRAMD4P3-201ENST00000621665 CHD1O14646 1710 aa27.93■■■□□ 2.06
GRAMD4P3-201ENST00000621665 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
GRAMD4P3-201ENST00000621665 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
GRAMD4P3-201ENST00000621665 SYNJ2O15056 1496 aa27.89■■■□□ 2.05
GRAMD4P3-201ENST00000621665 ERICH3Q5RHP9 1530 aa27.78■■■□□ 2.04
GRAMD4P3-201ENST00000621665 FHAD1B1AJZ9 1412 aa27.71■■■□□ 2.03
GRAMD4P3-201ENST00000621665 ADAMTS12P58397 1594 aa27.7■■■□□ 2.02
GRAMD4P3-201ENST00000621665 ARHGEF11O15085 1522 aa27.69■■■□□ 2.02
GRAMD4P3-201ENST00000621665 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
GRAMD4P3-201ENST00000621665 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
GRAMD4P3-201ENST00000621665 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
GRAMD4P3-201ENST00000621665 KIF27Q86VH2 1401 aa27.68■■■□□ 2.02
GRAMD4P3-201ENST00000621665 GRIN2AQ12879 1464 aa27.66■■■□□ 2.02
GRAMD4P3-201ENST00000621665 CLASP1Q7Z460 1538 aa27.66■■■□□ 2.02
GRAMD4P3-201ENST00000621665 TRIM41Q8WV44 630 aa27.65■■■□□ 2.02
GRAMD4P3-201ENST00000621665 NUP160Q12769 1436 aa27.54■■■□□ 2
GRAMD4P3-201ENST00000621665 CUL7Q14999 1698 aa27.5■■□□□ 1.99
GRAMD4P3-201ENST00000621665 IGF1RP08069 1367 aa27.5■■□□□ 1.99
GRAMD4P3-201ENST00000621665 CEP170Q5SW79 1584 aa27.46■■□□□ 1.99
GRAMD4P3-201ENST00000621665 CYB5RLQ6IPT4 315 aa27.46■■□□□ 1.99
GRAMD4P3-201ENST00000621665 ARAP1Q96P48 1450 aa27.42■■□□□ 1.98
GRAMD4P3-201ENST00000621665 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
GRAMD4P3-201ENST00000621665 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
GRAMD4P3-201ENST00000621665 JPH4Q96JJ6 628 aa27.29■■□□□ 1.96
GRAMD4P3-201ENST00000621665 RUSC2Q8N2Y8 1516 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms