RNA–Protein interactions for RNA: ENST00000621551.3

CACNA1E-209, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 14,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-209ENST00000621551 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
CACNA1E-209ENST00000621551 MYT1Q01538 1121 aa11.08□□□□□ -0.64
CACNA1E-209ENST00000621551 DCAF8L2P0C7V8 631 aa10.86□□□□□ -0.67
CACNA1E-209ENST00000621551 SUPT5HO00267 1087 aaKnown RBP10.84□□□□□ -0.67
CACNA1E-209ENST00000621551 PCGF6Q9BYE7 350 aa10.72□□□□□ -0.69
CACNA1E-209ENST00000621551 CENPBP07199 599 aaPredicted RBP10.69□□□□□ -0.7
CACNA1E-209ENST00000621551 ZEB1P37275 1124 aaPredicted RBP10.66□□□□□ -0.7
CACNA1E-209ENST00000621551 ERICH6Q7L0X2 663 aa10.52□□□□□ -0.72
CACNA1E-209ENST00000621551 NISCHQ9Y2I1 1504 aa10.51□□□□□ -0.73
CACNA1E-209ENST00000621551 HRCP23327 699 aa10.47□□□□□ -0.73
CACNA1E-209ENST00000621551 CCER1Q8TC90 406 aaPredicted RBP10.47□□□□□ -0.73
CACNA1E-209ENST00000621551 SHROOM4Q9ULL8 1493 aa10.46□□□□□ -0.73
CACNA1E-209ENST00000621551 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
CACNA1E-209ENST00000621551 APLP2Q06481 763 aa10.3□□□□□ -0.76
CACNA1E-209ENST00000621551 NEFLP07196 543 aa10.28□□□□□ -0.76
CACNA1E-209ENST00000621551 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
CACNA1E-209ENST00000621551 TRIM26Q12899 539 aaPredicted RBP10.21□□□□□ -0.77
CACNA1E-209ENST00000621551 FAM9AQ8IZU1 332 aaPredicted RBP10.21□□□□□ -0.78
CACNA1E-209ENST00000621551 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
CACNA1E-209ENST00000621551 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
CACNA1E-209ENST00000621551 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
CACNA1E-209ENST00000621551 GTF3C3Q9Y5Q9 886 aa9.99□□□□□ -0.81
CACNA1E-209ENST00000621551 DIEXFQ68CQ4 756 aaKnown RBP9.98□□□□□ -0.81
CACNA1E-209ENST00000621551 DAXXQ9UER7 740 aaPredicted RBP9.96□□□□□ -0.81
CACNA1E-209ENST00000621551 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
CACNA1E-209ENST00000621551 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
CACNA1E-209ENST00000621551 LOC105371045A0A1W2PR82 267 aa9.9□□□□□ -0.83
CACNA1E-209ENST00000621551 UBTFP17480 764 aaKnown RBP9.89□□□□□ -0.83
CACNA1E-209ENST00000621551 CHIC1Q5VXU3 224 aa9.88□□□□□ -0.83
CACNA1E-209ENST00000621551 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
CACNA1E-209ENST00000621551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.79□□□□□ -0.84
CACNA1E-209ENST00000621551 ZNF316A6NFI3 1004 aaPredicted RBP9.74□□□□□ -0.85
CACNA1E-209ENST00000621551 BCANQ96GW7 911 aa9.74□□□□□ -0.85
CACNA1E-209ENST00000621551 CDK11AQ9UQ88 783 aaPredicted RBP9.74□□□□□ -0.85
CACNA1E-209ENST00000621551 SCAF1Q9H7N4 1312 aaKnown RBP9.72□□□□□ -0.85
CACNA1E-209ENST00000621551 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
CACNA1E-209ENST00000621551 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
CACNA1E-209ENST00000621551 HNRNPUL2Q1KMD3 747 aaKnown RBP9.69□□□□□ -0.86
CACNA1E-209ENST00000621551 MYT1LQ9UL68 1186 aa9.68□□□□□ -0.86
CACNA1E-209ENST00000621551 NEUROD1Q13562 356 aa9.62□□□□□ -0.87
CACNA1E-209ENST00000621551 EIF5BO60841 1220 aaKnown RBP9.6□□□□□ -0.87
CACNA1E-209ENST00000621551 ITGAEP38570 1179 aa9.58□□□□□ -0.88
CACNA1E-209ENST00000621551 ANP32CO43423 234 aa9.57□□□□□ -0.88
CACNA1E-209ENST00000621551 ANP32AP39687 249 aaKnown RBP9.56□□□□□ -0.88
CACNA1E-209ENST00000621551 POLR3GLQ9BT43 218 aa9.56□□□□□ -0.88
CACNA1E-209ENST00000621551 GLIPR1L2Q4G1C9 344 aa9.55□□□□□ -0.88
CACNA1E-209ENST00000621551 ANP32EQ9BTT0 268 aa9.52□□□□□ -0.88
CACNA1E-209ENST00000621551 FKBP8Q14318 412 aa9.48□□□□□ -0.89
CACNA1E-209ENST00000621551 CNGB1Q14028 1251 aaPredicted RBP9.47□□□□□ -0.89
CACNA1E-209ENST00000621551 BCL11AQ9H165 835 aa9.45□□□□□ -0.9
CACNA1E-209ENST00000621551 NBR1Q14596 966 aa9.43□□□□□ -0.9
CACNA1E-209ENST00000621551 DCAF1Q9Y4B6 1507 aa9.4□□□□□ -0.9
CACNA1E-209ENST00000621551 NPM2Q86SE8 214 aaKnown RBP9.39□□□□□ -0.91
CACNA1E-209ENST00000621551 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
CACNA1E-209ENST00000621551 MIER1Q8N108 512 aa9.37□□□□□ -0.91
CACNA1E-209ENST00000621551 ANP32BQ92688 251 aaKnown RBP9.35□□□□□ -0.91
CACNA1E-209ENST00000621551 FAM50AQ14320 339 aaKnown RBP9.33□□□□□ -0.92
CACNA1E-209ENST00000621551 TRIM52Q96A61 297 aa9.26□□□□□ -0.93
CACNA1E-209ENST00000621551 CCDC136Q96JN2 1154 aa9.26□□□□□ -0.93
CACNA1E-209ENST00000621551 HNRNPUQ00839 825 aaKnown RBP eCLIP9.25□□□□□ -0.93
CACNA1E-209ENST00000621551 DDX10Q13206 875 aaKnown RBP9.24□□□□□ -0.93
CACNA1E-209ENST00000621551 CANXP27824 592 aaKnown RBP9.22□□□□□ -0.93
CACNA1E-209ENST00000621551 DEKP35659 375 aaKnown RBP9.22□□□□□ -0.93
CACNA1E-209ENST00000621551 DDRGK1Q96HY6 314 aa9.21□□□□□ -0.94
CACNA1E-209ENST00000621551 NEFMP07197 916 aa9.2□□□□□ -0.94
CACNA1E-209ENST00000621551 ERICH6BQ5W0A0 696 aa9.2□□□□□ -0.94
CACNA1E-209ENST00000621551 SUPT16HQ9Y5B9 1047 aaKnown RBP9.2□□□□□ -0.94
CACNA1E-209ENST00000621551 SLC4A1APQ9BWU0 796 aaKnown RBP9.2□□□□□ -0.94
CACNA1E-209ENST00000621551 UPF2Q9HAU5 1272 aaKnown RBP9.2□□□□□ -0.94
CACNA1E-209ENST00000621551 TNNT2P45379 298 aaPredicted RBP9.18□□□□□ -0.94
CACNA1E-209ENST00000621551 HSP90AA1P07900 732 aaKnown RBP9.18□□□□□ -0.94
CACNA1E-209ENST00000621551 NOP58Q9Y2X3 529 aaKnown RBP9.17□□□□□ -0.94
CACNA1E-209ENST00000621551 IRX6P78412 446 aaPredicted RBP9.16□□□□□ -0.94
CACNA1E-209ENST00000621551 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
CACNA1E-209ENST00000621551 RTN4Q9NQC3 1192 aaKnown RBP9.16□□□□□ -0.94
CACNA1E-209ENST00000621551 PPM1GO15355 546 aaPredicted RBP9.15□□□□□ -0.94
CACNA1E-209ENST00000621551 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.95
CACNA1E-209ENST00000621551 FAM9BQ8IZU0 186 aa9.15□□□□□ -0.95
CACNA1E-209ENST00000621551 ARXQ96QS3 562 aa9.14□□□□□ -0.95
CACNA1E-209ENST00000621551 NAP1L5Q96NT1 182 aaPredicted RBP9.12□□□□□ -0.95
CACNA1E-209ENST00000621551 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
CACNA1E-209ENST00000621551 BECN1Q14457 450 aa9.11□□□□□ -0.95
CACNA1E-209ENST00000621551 PPP4R2Q9NY27 417 aa9.11□□□□□ -0.95
CACNA1E-209ENST00000621551 MRS2Q9HD23 443 aa9.1□□□□□ -0.95
CACNA1E-209ENST00000621551 TRIM44Q96DX7 344 aaPredicted RBP9.09□□□□□ -0.95
CACNA1E-209ENST00000621551 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.08□□□□□ -0.96
CACNA1E-209ENST00000621551 LAS1LQ9Y4W2 734 aaKnown RBP9.08□□□□□ -0.96
CACNA1E-209ENST00000621551 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
CACNA1E-209ENST00000621551 TONSLQ96HA7 1378 aa9.06□□□□□ -0.96
CACNA1E-209ENST00000621551 TMC1Q8TDI8 760 aa9.06□□□□□ -0.96
CACNA1E-209ENST00000621551 CCDC180Q9P1Z9 1646 aa9.04□□□□□ -0.96
CACNA1E-209ENST00000621551 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
CACNA1E-209ENST00000621551 GOLGA6L22H0YM25 854 aa9.01□□□□□ -0.97
CACNA1E-209ENST00000621551 L1TD1Q5T7N2 865 aaKnown RBP9□□□□□ -0.97
CACNA1E-209ENST00000621551 SALL2Q9Y467 1007 aaPredicted RBP9□□□□□ -0.97
CACNA1E-209ENST00000621551 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
CACNA1E-209ENST00000621551 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.99□□□□□ -0.97
CACNA1E-209ENST00000621551 PTMAP06454 111 aaKnown RBP8.97□□□□□ -0.97
CACNA1E-209ENST00000621551 B4GALNT3Q6L9W6 998 aa8.97□□□□□ -0.97
CACNA1E-209ENST00000621551 HIRIP3Q9BW71 556 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1040 ms