RNA–Protein interactions for RNA: ENST00000621296.1

AL353770.4-202, humanhuman

TSL 3 BASIC

Gene AL353770.4, Length 1,126 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.4-202ENST00000621296 AEBP2Q6ZN18 517 aaPredicted RBP32.34■■■□□ 2.77
AL353770.4-202ENST00000621296 CHIC1Q5VXU3 224 aa31.6■■■□□ 2.65
AL353770.4-202ENST00000621296 PHF23Q9BUL5 403 aaPredicted RBP27.87■■■□□ 2.05
AL353770.4-202ENST00000621296 SENP3Q9H4L4 574 aaPredicted RBP27.58■■■□□ 2.01
AL353770.4-202ENST00000621296 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
AL353770.4-202ENST00000621296 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
AL353770.4-202ENST00000621296 FOXD1Q16676 465 aa25.59■■□□□ 1.69
AL353770.4-202ENST00000621296 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
AL353770.4-202ENST00000621296 ADRA2BP18089 450 aa24.46■■□□□ 1.51
AL353770.4-202ENST00000621296 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
AL353770.4-202ENST00000621296 PIAS4Q8N2W9 510 aaPredicted RBP24.11■■□□□ 1.45
AL353770.4-202ENST00000621296 MSH5O43196 834 aa23.79■■□□□ 1.4
AL353770.4-202ENST00000621296 ABCC9O60706 1549 aa23.74■■□□□ 1.39
AL353770.4-202ENST00000621296 NACADO15069 1562 aa22.84■■□□□ 1.25
AL353770.4-202ENST00000621296 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
AL353770.4-202ENST00000621296 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
AL353770.4-202ENST00000621296 PPP4R3CPQ6ZMV5 832 aa22.7■■□□□ 1.22
AL353770.4-202ENST00000621296 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
AL353770.4-202ENST00000621296 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
AL353770.4-202ENST00000621296 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
AL353770.4-202ENST00000621296 KCNA4P22459 653 aa22.44■■□□□ 1.18
AL353770.4-202ENST00000621296 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
AL353770.4-202ENST00000621296 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
AL353770.4-202ENST00000621296 POTEDQ86YR6 584 aa22.23■■□□□ 1.15
AL353770.4-202ENST00000621296 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
AL353770.4-202ENST00000621296 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
AL353770.4-202ENST00000621296 MAPK8IP2Q13387 824 aaPredicted RBP22.16■■□□□ 1.14
AL353770.4-202ENST00000621296 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
AL353770.4-202ENST00000621296 NCBP3Q53F19 620 aaKnown RBP22.08■■□□□ 1.13
AL353770.4-202ENST00000621296 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
AL353770.4-202ENST00000621296 CNKSR2Q8WXI2 1034 aa21.99■■□□□ 1.11
AL353770.4-202ENST00000621296 DMRT2Q9Y5R5 561 aa21.93■■□□□ 1.1
AL353770.4-202ENST00000621296 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
AL353770.4-202ENST00000621296 NPM3O75607 178 aaKnown RBP21.86■■□□□ 1.09
AL353770.4-202ENST00000621296 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
AL353770.4-202ENST00000621296 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
AL353770.4-202ENST00000621296 RNF216Q9NWF9 866 aaPredicted RBP21.52■■□□□ 1.04
AL353770.4-202ENST00000621296 HOXD11P31277 338 aaPredicted RBP21.42■■□□□ 1.02
AL353770.4-202ENST00000621296 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
AL353770.4-202ENST00000621296 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
AL353770.4-202ENST00000621296 NCAPD3P42695 1498 aa21.14■□□□□ 0.98
AL353770.4-202ENST00000621296 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
AL353770.4-202ENST00000621296 SMARCA4P51532 1647 aa21.06■□□□□ 0.96
AL353770.4-202ENST00000621296 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
AL353770.4-202ENST00000621296 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
AL353770.4-202ENST00000621296 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
AL353770.4-202ENST00000621296 PEG3Q9GZU2 1588 aa20.98■□□□□ 0.95
AL353770.4-202ENST00000621296 EHMT2Q96KQ7 1210 aa20.97■□□□□ 0.95
AL353770.4-202ENST00000621296 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
AL353770.4-202ENST00000621296 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
AL353770.4-202ENST00000621296 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
AL353770.4-202ENST00000621296 ZBTB22O15209 634 aa20.71■□□□□ 0.91
AL353770.4-202ENST00000621296 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
AL353770.4-202ENST00000621296 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
AL353770.4-202ENST00000621296 SLC4A2P04920 1241 aa20.64■□□□□ 0.89
AL353770.4-202ENST00000621296 WIZO95785 1651 aa20.6■□□□□ 0.89
AL353770.4-202ENST00000621296 FOXD4L1Q9NU39 408 aa20.55■□□□□ 0.88
AL353770.4-202ENST00000621296 NESP48681 1621 aa20.53■□□□□ 0.88
AL353770.4-202ENST00000621296 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
AL353770.4-202ENST00000621296 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
AL353770.4-202ENST00000621296 CUX2O14529 1486 aa20.44■□□□□ 0.86
AL353770.4-202ENST00000621296 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
AL353770.4-202ENST00000621296 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
AL353770.4-202ENST00000621296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.4■□□□□ 0.86
AL353770.4-202ENST00000621296 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
AL353770.4-202ENST00000621296 CFTRP13569 1480 aa20.32■□□□□ 0.84
AL353770.4-202ENST00000621296 RNF39Q9H2S5 420 aa20.31■□□□□ 0.84
AL353770.4-202ENST00000621296 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
AL353770.4-202ENST00000621296 KIF21AQ7Z4S6 1674 aa20.24■□□□□ 0.83
AL353770.4-202ENST00000621296 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
AL353770.4-202ENST00000621296 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
AL353770.4-202ENST00000621296 MYCNP04198 464 aaPredicted RBP20.15■□□□□ 0.82
AL353770.4-202ENST00000621296 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
AL353770.4-202ENST00000621296 WDR62O43379 1518 aa20.13■□□□□ 0.81
AL353770.4-202ENST00000621296 U3KPZ7 1027 aaPredicted RBP20.12■□□□□ 0.81
AL353770.4-202ENST00000621296 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
AL353770.4-202ENST00000621296 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
AL353770.4-202ENST00000621296 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
AL353770.4-202ENST00000621296 C1QBPQ07021 282 aaKnown RBP20.08■□□□□ 0.81
AL353770.4-202ENST00000621296 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
AL353770.4-202ENST00000621296 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
AL353770.4-202ENST00000621296 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
AL353770.4-202ENST00000621296 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
AL353770.4-202ENST00000621296 ATXN8OSP0DMR3 200 aa19.81■□□□□ 0.76
AL353770.4-202ENST00000621296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
AL353770.4-202ENST00000621296 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
AL353770.4-202ENST00000621296 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
AL353770.4-202ENST00000621296 SAMD1Q6SPF0 538 aaPredicted RBP19.78■□□□□ 0.76
AL353770.4-202ENST00000621296 DNMBPQ6XZF7 1577 aa19.77■□□□□ 0.76
AL353770.4-202ENST00000621296 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
AL353770.4-202ENST00000621296 ATF5Q9Y2D1 282 aaPredicted RBP19.68■□□□□ 0.74
AL353770.4-202ENST00000621296 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
AL353770.4-202ENST00000621296 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
AL353770.4-202ENST00000621296 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
AL353770.4-202ENST00000621296 CUX1P39880 1505 aa19.61■□□□□ 0.73
AL353770.4-202ENST00000621296 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
AL353770.4-202ENST00000621296 SOGA1O94964 1423 aa19.57■□□□□ 0.72
AL353770.4-202ENST00000621296 APLP2Q06481 763 aa19.56■□□□□ 0.72
AL353770.4-202ENST00000621296 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
AL353770.4-202ENST00000621296 WDR97A6NE52 1622 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms