RNA–Protein interactions for RNA: ENST00000620705.4

NT5C3A-214, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best) BASIC

Gene NT5C3A, Length 1,704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-214ENST00000620705 AEBP2Q6ZN18 517 aaPredicted RBP29.72■■■□□ 2.35
NT5C3A-214ENST00000620705 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.07
NT5C3A-214ENST00000620705 NISCHQ9Y2I1 1504 aa25.83■■□□□ 1.73
NT5C3A-214ENST00000620705 SENP3Q9H4L4 574 aaPredicted RBP25.66■■□□□ 1.7
NT5C3A-214ENST00000620705 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
NT5C3A-214ENST00000620705 FOXD1Q16676 465 aa23.9■■□□□ 1.42
NT5C3A-214ENST00000620705 POTEDQ86YR6 584 aa23.7■■□□□ 1.39
NT5C3A-214ENST00000620705 MSH5O43196 834 aa22.82■■□□□ 1.24
NT5C3A-214ENST00000620705 PIAS4Q8N2W9 510 aaPredicted RBP22.17■■□□□ 1.14
NT5C3A-214ENST00000620705 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
NT5C3A-214ENST00000620705 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
NT5C3A-214ENST00000620705 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
NT5C3A-214ENST00000620705 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
NT5C3A-214ENST00000620705 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.06
NT5C3A-214ENST00000620705 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
NT5C3A-214ENST00000620705 ADRA2BP18089 450 aa21.55■■□□□ 1.04
NT5C3A-214ENST00000620705 DCAF1Q9Y4B6 1507 aa21.31■■□□□ 1
NT5C3A-214ENST00000620705 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
NT5C3A-214ENST00000620705 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
NT5C3A-214ENST00000620705 HRCP23327 699 aa20.94■□□□□ 0.94
NT5C3A-214ENST00000620705 ABCC9O60706 1549 aa20.75■□□□□ 0.91
NT5C3A-214ENST00000620705 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
NT5C3A-214ENST00000620705 SCRIBQ14160 1630 aa20.47■□□□□ 0.87
NT5C3A-214ENST00000620705 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
NT5C3A-214ENST00000620705 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.87
NT5C3A-214ENST00000620705 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
NT5C3A-214ENST00000620705 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
NT5C3A-214ENST00000620705 PPARGC1BQ86YN6 1023 aaKnown RBP20.28■□□□□ 0.84
NT5C3A-214ENST00000620705 NACADO15069 1562 aa20.26■□□□□ 0.83
NT5C3A-214ENST00000620705 TRIM41Q8WV44 630 aa20.22■□□□□ 0.83
NT5C3A-214ENST00000620705 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
NT5C3A-214ENST00000620705 ZEB1P37275 1124 aaPredicted RBP20.14■□□□□ 0.81
NT5C3A-214ENST00000620705 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
NT5C3A-214ENST00000620705 CACNB1Q02641 598 aaPredicted RBP20.02■□□□□ 0.8
NT5C3A-214ENST00000620705 CECR2Q9BXF3 1484 aa20.02■□□□□ 0.79
NT5C3A-214ENST00000620705 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
NT5C3A-214ENST00000620705 WIZO95785 1651 aa19.94■□□□□ 0.78
NT5C3A-214ENST00000620705 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
NT5C3A-214ENST00000620705 SCAF1Q9H7N4 1312 aaKnown RBP19.94■□□□□ 0.78
NT5C3A-214ENST00000620705 FAM9AQ8IZU1 332 aaPredicted RBP19.92■□□□□ 0.78
NT5C3A-214ENST00000620705 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
NT5C3A-214ENST00000620705 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
NT5C3A-214ENST00000620705 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
NT5C3A-214ENST00000620705 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
NT5C3A-214ENST00000620705 SMARCA2P51531 1590 aa19.58■□□□□ 0.73
NT5C3A-214ENST00000620705 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
NT5C3A-214ENST00000620705 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
NT5C3A-214ENST00000620705 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
NT5C3A-214ENST00000620705 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
NT5C3A-214ENST00000620705 EEA1Q15075 1411 aa19.51■□□□□ 0.71
NT5C3A-214ENST00000620705 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
NT5C3A-214ENST00000620705 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
NT5C3A-214ENST00000620705 CEP162Q5TB80 1403 aa19.44■□□□□ 0.7
NT5C3A-214ENST00000620705 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
NT5C3A-214ENST00000620705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.38■□□□□ 0.69
NT5C3A-214ENST00000620705 SOGA1O94964 1423 aa19.36■□□□□ 0.69
NT5C3A-214ENST00000620705 DCAF8L1A6NGE4 600 aa19.35■□□□□ 0.69
NT5C3A-214ENST00000620705 RNF39Q9H2S5 420 aa19.32■□□□□ 0.68
NT5C3A-214ENST00000620705 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
NT5C3A-214ENST00000620705 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
NT5C3A-214ENST00000620705 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
NT5C3A-214ENST00000620705 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
NT5C3A-214ENST00000620705 RUSC2Q8N2Y8 1516 aa19.23■□□□□ 0.67
NT5C3A-214ENST00000620705 KIF21BO75037 1637 aa19.22■□□□□ 0.67
NT5C3A-214ENST00000620705 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
NT5C3A-214ENST00000620705 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
NT5C3A-214ENST00000620705 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
NT5C3A-214ENST00000620705 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
NT5C3A-214ENST00000620705 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
NT5C3A-214ENST00000620705 HOXD11P31277 338 aaPredicted RBP19.13■□□□□ 0.65
NT5C3A-214ENST00000620705 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
NT5C3A-214ENST00000620705 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
NT5C3A-214ENST00000620705 BAZ1BQ9UIG0 1483 aaKnown RBP19.1■□□□□ 0.65
NT5C3A-214ENST00000620705 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
NT5C3A-214ENST00000620705 ATAD2BQ9ULI0 1458 aa19.05■□□□□ 0.64
NT5C3A-214ENST00000620705 CLIP1P30622 1438 aa19.05■□□□□ 0.64
NT5C3A-214ENST00000620705 NEUROD1Q13562 356 aa19.04■□□□□ 0.64
NT5C3A-214ENST00000620705 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.64
NT5C3A-214ENST00000620705 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
NT5C3A-214ENST00000620705 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
NT5C3A-214ENST00000620705 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
NT5C3A-214ENST00000620705 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
NT5C3A-214ENST00000620705 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
NT5C3A-214ENST00000620705 APLP2Q06481 763 aa18.91■□□□□ 0.62
NT5C3A-214ENST00000620705 GTF3C3Q9Y5Q9 886 aa18.89■□□□□ 0.61
NT5C3A-214ENST00000620705 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
NT5C3A-214ENST00000620705 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
NT5C3A-214ENST00000620705 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
NT5C3A-214ENST00000620705 PRXQ9BXM0 1461 aa18.78■□□□□ 0.6
NT5C3A-214ENST00000620705 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
NT5C3A-214ENST00000620705 RNF216Q9NWF9 866 aaPredicted RBP18.77■□□□□ 0.6
NT5C3A-214ENST00000620705 HMGXB3Q12766 1538 aa18.76■□□□□ 0.59
NT5C3A-214ENST00000620705 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
NT5C3A-214ENST00000620705 CNKSR2Q8WXI2 1034 aa18.74■□□□□ 0.59
NT5C3A-214ENST00000620705 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
NT5C3A-214ENST00000620705 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
NT5C3A-214ENST00000620705 MIER1Q8N108 512 aa18.68■□□□□ 0.58
NT5C3A-214ENST00000620705 CUX1P39880 1505 aa18.66■□□□□ 0.58
NT5C3A-214ENST00000620705 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
NT5C3A-214ENST00000620705 DHX57Q6P158 1386 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms