RNA–Protein interactions for RNA: ENST00000619859.1

HM13-225, Transcript of histocompatibility minor 13, humanhuman

TSL 3

Gene HM13, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-225ENST00000619859 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
HM13-225ENST00000619859 CCDC180Q9P1Z9 1646 aa15.16■□□□□ 0.02
HM13-225ENST00000619859 ABCC9O60706 1549 aa14.97□□□□□ -0.01
HM13-225ENST00000619859 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
HM13-225ENST00000619859 NACADO15069 1562 aa14.27□□□□□ -0.12
HM13-225ENST00000619859 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
HM13-225ENST00000619859 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
HM13-225ENST00000619859 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
HM13-225ENST00000619859 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.16
HM13-225ENST00000619859 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
HM13-225ENST00000619859 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
HM13-225ENST00000619859 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
HM13-225ENST00000619859 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
HM13-225ENST00000619859 SHROOM4Q9ULL8 1493 aa13.76□□□□□ -0.21
HM13-225ENST00000619859 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
HM13-225ENST00000619859 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
HM13-225ENST00000619859 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
HM13-225ENST00000619859 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
HM13-225ENST00000619859 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
HM13-225ENST00000619859 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
HM13-225ENST00000619859 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
HM13-225ENST00000619859 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
HM13-225ENST00000619859 BAZ1AQ9NRL2 1556 aaPredicted RBP13.11□□□□□ -0.31
HM13-225ENST00000619859 HMGXB3Q12766 1538 aa13.09□□□□□ -0.31
HM13-225ENST00000619859 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
HM13-225ENST00000619859 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
HM13-225ENST00000619859 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
HM13-225ENST00000619859 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
HM13-225ENST00000619859 NESP48681 1621 aa12.89□□□□□ -0.35
HM13-225ENST00000619859 CUX2O14529 1486 aa12.89□□□□□ -0.35
HM13-225ENST00000619859 WIZO95785 1651 aa12.86□□□□□ -0.35
HM13-225ENST00000619859 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
HM13-225ENST00000619859 THOC2Q8NI27 1593 aaKnown RBP12.78□□□□□ -0.36
HM13-225ENST00000619859 KIF21AQ7Z4S6 1674 aa12.78□□□□□ -0.36
HM13-225ENST00000619859 RSF1Q96T23 1441 aaPredicted RBP12.76□□□□□ -0.37
HM13-225ENST00000619859 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
HM13-225ENST00000619859 CADPSQ9ULU8 1353 aa12.74□□□□□ -0.37
HM13-225ENST00000619859 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.37
HM13-225ENST00000619859 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.38
HM13-225ENST00000619859 CFTRP13569 1480 aa12.64□□□□□ -0.39
HM13-225ENST00000619859 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
HM13-225ENST00000619859 WDR62O43379 1518 aa12.62□□□□□ -0.39
HM13-225ENST00000619859 CEP164Q9UPV0 1460 aa12.61□□□□□ -0.39
HM13-225ENST00000619859 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
HM13-225ENST00000619859 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
HM13-225ENST00000619859 CCDC88BA6NC98 1476 aa12.54□□□□□ -0.4
HM13-225ENST00000619859 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
HM13-225ENST00000619859 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
HM13-225ENST00000619859 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
HM13-225ENST00000619859 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
HM13-225ENST00000619859 IFT140Q96RY7 1462 aa12.36□□□□□ -0.43
HM13-225ENST00000619859 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
HM13-225ENST00000619859 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
HM13-225ENST00000619859 EIF4G3O43432 1585 aaKnown RBP12.28□□□□□ -0.44
HM13-225ENST00000619859 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
HM13-225ENST00000619859 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.45
HM13-225ENST00000619859 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
HM13-225ENST00000619859 CUX1P39880 1505 aa12.21□□□□□ -0.45
HM13-225ENST00000619859 AQRO60306 1485 aaKnown RBP eCLIP12.21□□□□□ -0.465e-8■■■■■ 32.4
HM13-225ENST00000619859 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
HM13-225ENST00000619859 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
HM13-225ENST00000619859 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
HM13-225ENST00000619859 CHD1O14646 1710 aa12.19□□□□□ -0.46
HM13-225ENST00000619859 SOGA1O94964 1423 aa12.19□□□□□ -0.46
HM13-225ENST00000619859 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
HM13-225ENST00000619859 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.47
HM13-225ENST00000619859 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.47
HM13-225ENST00000619859 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.47
HM13-225ENST00000619859 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
HM13-225ENST00000619859 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
HM13-225ENST00000619859 SNAPC4Q5SXM2 1469 aa12.1□□□□□ -0.47
HM13-225ENST00000619859 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
HM13-225ENST00000619859 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
HM13-225ENST00000619859 MAGI1Q96QZ7 1491 aaPredicted RBP12.09□□□□□ -0.47
HM13-225ENST00000619859 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
HM13-225ENST00000619859 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
HM13-225ENST00000619859 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
HM13-225ENST00000619859 FBLN2P98095 1184 aa12.07□□□□□ -0.48
HM13-225ENST00000619859 TOP2BQ02880 1626 aa12.07□□□□□ -0.48
HM13-225ENST00000619859 GAPVD1Q14C86 1478 aa12.06□□□□□ -0.48
HM13-225ENST00000619859 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
HM13-225ENST00000619859 CLASP1Q7Z460 1538 aa12.04□□□□□ -0.48
HM13-225ENST00000619859 SYNJ1O43426 1573 aa12.04□□□□□ -0.48
HM13-225ENST00000619859 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
HM13-225ENST00000619859 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
HM13-225ENST00000619859 ARAP1Q96P48 1450 aa11.99□□□□□ -0.49
HM13-225ENST00000619859 ADAMTS12P58397 1594 aa11.96□□□□□ -0.49
HM13-225ENST00000619859 CYB5RLQ6IPT4 315 aa11.96□□□□□ -0.49
HM13-225ENST00000619859 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
HM13-225ENST00000619859 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
HM13-225ENST00000619859 FHAD1B1AJZ9 1412 aa11.91□□□□□ -0.5
HM13-225ENST00000619859 NUP160Q12769 1436 aa11.9□□□□□ -0.5
HM13-225ENST00000619859 CEP170Q5SW79 1584 aa11.9□□□□□ -0.5
HM13-225ENST00000619859 SHROOM2Q13796 1616 aa11.86□□□□□ -0.51
HM13-225ENST00000619859 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
HM13-225ENST00000619859 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
HM13-225ENST00000619859 CUL7Q14999 1698 aa11.81□□□□□ -0.52
HM13-225ENST00000619859 KIF27Q86VH2 1401 aa11.8□□□□□ -0.52
HM13-225ENST00000619859 RUSC2Q8N2Y8 1516 aa11.8□□□□□ -0.52
HM13-225ENST00000619859 IGF1RP08069 1367 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms