RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 AKNAQ7Z591 1439 aa42.52■■■■■ 4.4
KHSRP-213ENST00000619396 TRIM52Q96A61 297 aa42.51■■■■■ 4.4
KHSRP-213ENST00000619396 DENND4BO75064 1496 aaPredicted RBP42.49■■■■■ 4.39
KHSRP-213ENST00000619396 KIF14Q15058 1648 aa42.49■■■■■ 4.39
KHSRP-213ENST00000619396 ABCC5O15440 1437 aa42.48■■■■■ 4.39
KHSRP-213ENST00000619396 CCER2I3L3R5 266 aa42.47■■■■■ 4.39
KHSRP-213ENST00000619396 KDM5BQ9UGL1 1544 aa42.47■■■■■ 4.39
KHSRP-213ENST00000619396 DNMT1P26358 1616 aaKnown RBP42.46■■■■■ 4.39
KHSRP-213ENST00000619396 ABCA8O94911 1581 aa42.4■■■■■ 4.38
KHSRP-213ENST00000619396 ANP32CO43423 234 aa42.38■■■■■ 4.37
KHSRP-213ENST00000619396 GPATCH8Q9UKJ3 1502 aaKnown RBP42.37■■■■■ 4.37
KHSRP-213ENST00000619396 CFDP1Q9UEE9 299 aaPredicted RBP42.36■■■■■ 4.37
KHSRP-213ENST00000619396 ADCY10Q96PN6 1610 aa42.35■■■■■ 4.37
KHSRP-213ENST00000619396 CAMSAP2Q08AD1 1489 aa42.34■■■■■ 4.37
KHSRP-213ENST00000619396 CHD1O14646 1710 aa42.33■■■■■ 4.37
KHSRP-213ENST00000619396 ROCK1Q13464 1354 aa42.33■■■■■ 4.37
KHSRP-213ENST00000619396 MPHOSPH9Q99550 1183 aa42.32■■■■■ 4.37
KHSRP-213ENST00000619396 ZNF777Q9ULD5 760 aaPredicted RBP42.32■■■■■ 4.37
KHSRP-213ENST00000619396 ATP10BO94823 1461 aa42.31■■■■■ 4.36
KHSRP-213ENST00000619396 ITSN2Q9NZM3 1697 aa42.31■■■■■ 4.36
KHSRP-213ENST00000619396 FOXD1Q16676 465 aa42.31■■■■■ 4.36
KHSRP-213ENST00000619396 PLEKHD1A6NEE1 506 aa42.23■■■■■ 4.35
KHSRP-213ENST00000619396 MYT1Q01538 1121 aa42.21■■■■■ 4.35
KHSRP-213ENST00000619396 PTPRGP23470 1445 aa42.19■■■■■ 4.34
KHSRP-213ENST00000619396 CDC42BPAQ5VT25 1732 aa42.16■■■■■ 4.34
KHSRP-213ENST00000619396 ABCC10Q5T3U5 1492 aa42.13■■■■■ 4.34
KHSRP-213ENST00000619396 NCOA1Q15788 1441 aa42.1■■■■■ 4.33
KHSRP-213ENST00000619396 TSHZ2Q9NRE2 1034 aa42.1■■■■■ 4.33
KHSRP-213ENST00000619396 CROCC2H7BZ55 1655 aa42.08■■■■■ 4.33
KHSRP-213ENST00000619396 ADGBQ8N7X0 1667 aa42.08■■■■■ 4.33
KHSRP-213ENST00000619396 FKBP8Q14318 412 aa42.05■■■■■ 4.32
KHSRP-213ENST00000619396 HSPA5P11021 654 aaKnown RBP42.03■■■■■ 4.32
KHSRP-213ENST00000619396 SLC4A1APQ9BWU0 796 aaKnown RBP42.03■■■■■ 4.32
KHSRP-213ENST00000619396 ANKRD30BQ9BXX2 1392 aa42.01■■■■■ 4.32
KHSRP-213ENST00000619396 ERCC6L2Q5T890 1561 aa42■■■■■ 4.31
KHSRP-213ENST00000619396 WASHC2AQ641Q2 1341 aa41.99■■■■■ 4.31
KHSRP-213ENST00000619396 SHROOM2Q13796 1616 aa41.99■■■■■ 4.31
KHSRP-213ENST00000619396 L3MBTL2Q969R5 705 aa41.99■■■■■ 4.31
KHSRP-213ENST00000619396 ADGRL2O95490 1459 aa41.98■■■■■ 4.31
KHSRP-213ENST00000619396 PZPP20742 1482 aa41.95■■■■■ 4.31
KHSRP-213ENST00000619396 BCANQ96GW7 911 aa41.93■■■■■ 4.3
KHSRP-213ENST00000619396 EIF4G2P78344 907 aaKnown RBP eCLIP41.91■■■■■ 4.3
KHSRP-213ENST00000619396 ANKRD30AQ9BXX3 1397 aa41.91■■■■■ 4.3
KHSRP-213ENST00000619396 RPRD2Q5VT52 1461 aaKnown RBP41.89■■■■■ 4.3
KHSRP-213ENST00000619396 HNRNPMP52272 730 aaKnown RBP eCLIP41.87■■■■■ 4.295e-7■□□□□ 11
KHSRP-213ENST00000619396 C9orf84Q5VXU9 1444 aa41.84■■■■■ 4.29
KHSRP-213ENST00000619396 NEFLP07196 543 aa41.84■■■■■ 4.29
KHSRP-213ENST00000619396 ANKRD50Q9ULJ7 1429 aa41.82■■■■■ 4.28
KHSRP-213ENST00000619396 CDC42BPBQ9Y5S2 1711 aa41.81■■■■■ 4.28
KHSRP-213ENST00000619396 TEX14Q8IWB6 1497 aa41.8■■■■■ 4.28
KHSRP-213ENST00000619396 SHANK2Q9UPX8 1470 aa41.77■■■■■ 4.28
KHSRP-213ENST00000619396 NBPF8Q3BBV2 869 aa41.76■■■■■ 4.28
KHSRP-213ENST00000619396 CNTLNQ9NXG0 1405 aa41.76■■■■■ 4.27
KHSRP-213ENST00000619396 SAMD9LQ8IVG5 1584 aa41.75■■■■■ 4.27
KHSRP-213ENST00000619396 PREX2Q70Z35 1606 aa41.74■■■■■ 4.27
KHSRP-213ENST00000619396 TSPY4P0CV99 314 aa41.73■■■■■ 4.27
KHSRP-213ENST00000619396 TSPY10P0CW01 314 aa41.73■■■■■ 4.27
KHSRP-213ENST00000619396 MBD5Q9P267 1494 aa41.73■■■■■ 4.27
KHSRP-213ENST00000619396 PKD2Q13563 968 aa41.72■■■■■ 4.27
KHSRP-213ENST00000619396 C11orf95C9JLR9 678 aaPredicted RBP41.71■■■■■ 4.27
KHSRP-213ENST00000619396 TTC37Q6PGP7 1564 aa41.71■■■■■ 4.27
KHSRP-213ENST00000619396 ABCC2Q92887 1545 aa41.7■■■■■ 4.27
KHSRP-213ENST00000619396 KIAA1107Q9UPP5 1409 aa41.69■■■■■ 4.27
KHSRP-213ENST00000619396 CCDC7Q96M83 1385 aa41.69■■■■■ 4.26
KHSRP-213ENST00000619396 ARHGEF5Q12774 1597 aa41.68■■■■■ 4.26
KHSRP-213ENST00000619396 HNRNPUQ00839 825 aaKnown RBP eCLIP41.65■■■■■ 4.26
KHSRP-213ENST00000619396 CLASP1Q7Z460 1538 aa41.65■■■■■ 4.26
KHSRP-213ENST00000619396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.65■■■■■ 4.268e-7■■□□□ 11.6
KHSRP-213ENST00000619396 NUP155O75694 1391 aa41.64■■■■■ 4.26
KHSRP-213ENST00000619396 KIF15Q9NS87 1388 aa41.64■■■■■ 4.26
KHSRP-213ENST00000619396 SPATA31E1Q6ZUB1 1445 aa41.62■■■■■ 4.25
KHSRP-213ENST00000619396 CCDC141Q6ZP82 1450 aa41.59■■■■■ 4.25
KHSRP-213ENST00000619396 ARHGAP5Q13017 1502 aa41.58■■■■■ 4.25
KHSRP-213ENST00000619396 SYCP2Q9BX26 1530 aa41.57■■■■■ 4.24
KHSRP-213ENST00000619396 CCDC184Q52MB2 194 aa41.53■■■■■ 4.24
KHSRP-213ENST00000619396 PRKRIP1Q9H875 184 aaPredicted RBP41.53■■■■■ 4.24
KHSRP-213ENST00000619396 ZCCHC11Q5TAX3 1644 aaKnown RBP41.49■■■■■ 4.23
KHSRP-213ENST00000619396 POLR1AO95602 1720 aaPredicted RBP41.48■■■■■ 4.23
KHSRP-213ENST00000619396 MYO5CQ9NQX4 1742 aa41.48■■■■■ 4.23
KHSRP-213ENST00000619396 KDM5DQ9BY66 1539 aa41.46■■■■■ 4.23
KHSRP-213ENST00000619396 KIF7Q2M1P5 1343 aa41.46■■■■■ 4.23
KHSRP-213ENST00000619396 ZNF326Q5BKZ1 582 aaKnown RBP41.43■■■■■ 4.22
KHSRP-213ENST00000619396 RSPH4AQ5TD94 716 aa41.41■■■■■ 4.22
KHSRP-213ENST00000619396 ARHGEF12Q9NZN5 1544 aa41.36■■■■■ 4.21
KHSRP-213ENST00000619396 UHRF1BP1LA0JNW5 1464 aa41.35■■■■■ 4.21
KHSRP-213ENST00000619396 MAST1Q9Y2H9 1570 aa41.32■■■■■ 4.2
KHSRP-213ENST00000619396 FAM135AQ9P2D6 1515 aa41.31■■■■■ 4.2
KHSRP-213ENST00000619396 MRS2Q9HD23 443 aa41.29■■■■■ 4.2
KHSRP-213ENST00000619396 RBM19Q9Y4C8 960 aaKnown RBP41.29■■■■■ 4.2
KHSRP-213ENST00000619396 PLCH2O75038 1416 aa41.28■■■■■ 4.2
KHSRP-213ENST00000619396 FAM9BQ8IZU0 186 aa41.24■■■■■ 4.19
KHSRP-213ENST00000619396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP41.24■■■■■ 4.196e-7■■□□□ 13.3
KHSRP-213ENST00000619396 PLEKHH2Q8IVE3 1493 aa41.23■■■■■ 4.19
KHSRP-213ENST00000619396 ERICH6BQ5W0A0 696 aa41.21■■■■■ 4.19
KHSRP-213ENST00000619396 ZBED9Q6R2W3 1325 aa41.2■■■■■ 4.19
KHSRP-213ENST00000619396 KDM2AQ9Y2K7 1162 aa41.2■■■■■ 4.19
KHSRP-213ENST00000619396 USP47Q96K76 1375 aa41.19■■■■■ 4.18
KHSRP-213ENST00000619396 BCORL1Q5H9F3 1711 aa41.19■■■■■ 4.18
KHSRP-213ENST00000619396 IRX6P78412 446 aaPredicted RBP41.19■■■■■ 4.18
KHSRP-213ENST00000619396 ANP32EQ9BTT0 268 aa41.19■■■■■ 4.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms