RNA–Protein interactions for RNA: ENST00000617697.4

SLC39A1-210, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC39A1, Length 2,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-210ENST00000617697 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
SLC39A1-210ENST00000617697 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
SLC39A1-210ENST00000617697 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
SLC39A1-210ENST00000617697 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
SLC39A1-210ENST00000617697 DCAF1Q9Y4B6 1507 aa31.06■■■□□ 2.56
SLC39A1-210ENST00000617697 SUPT5HO00267 1087 aaKnown RBP30.89■■■□□ 2.53
SLC39A1-210ENST00000617697 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
SLC39A1-210ENST00000617697 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
SLC39A1-210ENST00000617697 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
SLC39A1-210ENST00000617697 ABCC9O60706 1549 aa30.03■■■□□ 2.4
SLC39A1-210ENST00000617697 SCRIBQ14160 1630 aa29.92■■■□□ 2.38
SLC39A1-210ENST00000617697 NACADO15069 1562 aa29.82■■■□□ 2.36
SLC39A1-210ENST00000617697 RSF1Q96T23 1441 aaPredicted RBP29.58■■■□□ 2.33
SLC39A1-210ENST00000617697 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
SLC39A1-210ENST00000617697 CECR2Q9BXF3 1484 aa29.12■■■□□ 2.25
SLC39A1-210ENST00000617697 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
SLC39A1-210ENST00000617697 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
SLC39A1-210ENST00000617697 LOC105371045A0A1W2PR82 267 aa28.97■■■□□ 2.23
SLC39A1-210ENST00000617697 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
SLC39A1-210ENST00000617697 WIZO95785 1651 aa28.95■■■□□ 2.23
SLC39A1-210ENST00000617697 HRCP23327 699 aa28.92■■■□□ 2.22
SLC39A1-210ENST00000617697 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
SLC39A1-210ENST00000617697 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
SLC39A1-210ENST00000617697 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
SLC39A1-210ENST00000617697 TOP2AP11388 1531 aaKnown RBP28.67■■■□□ 2.18
SLC39A1-210ENST00000617697 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
SLC39A1-210ENST00000617697 TRIM26Q12899 539 aaPredicted RBP28.59■■■□□ 2.17
SLC39A1-210ENST00000617697 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
SLC39A1-210ENST00000617697 SMARCA2P51531 1590 aa28.43■■■□□ 2.14
SLC39A1-210ENST00000617697 CCDC88BA6NC98 1476 aa28.38■■■□□ 2.13
SLC39A1-210ENST00000617697 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
SLC39A1-210ENST00000617697 PEG3Q9GZU2 1588 aa28.26■■■□□ 2.11
SLC39A1-210ENST00000617697 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
SLC39A1-210ENST00000617697 PABPN1Q86U42 306 aaKnown RBP eCLIP28.13■■■□□ 2.09
SLC39A1-210ENST00000617697 ZEB1P37275 1124 aaPredicted RBP28.08■■■□□ 2.09
SLC39A1-210ENST00000617697 EHMT2Q96KQ7 1210 aa28.07■■■□□ 2.08
SLC39A1-210ENST00000617697 EEA1Q15075 1411 aa28.06■■■□□ 2.08
SLC39A1-210ENST00000617697 PPARGC1BQ86YN6 1023 aaKnown RBP28.03■■■□□ 2.08
SLC39A1-210ENST00000617697 ATAD2BQ9ULI0 1458 aa27.93■■■□□ 2.06
SLC39A1-210ENST00000617697 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
SLC39A1-210ENST00000617697 WRNQ14191 1432 aaPredicted RBP eCLIP27.86■■■□□ 2.05
SLC39A1-210ENST00000617697 SOGA1O94964 1423 aa27.84■■■□□ 2.05
SLC39A1-210ENST00000617697 TNIKQ9UKE5 1360 aa27.81■■■□□ 2.04
SLC39A1-210ENST00000617697 CEP162Q5TB80 1403 aa27.77■■■□□ 2.04
SLC39A1-210ENST00000617697 CSRNP3Q8WYN3 585 aa27.77■■■□□ 2.04
SLC39A1-210ENST00000617697 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
SLC39A1-210ENST00000617697 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
SLC39A1-210ENST00000617697 RUSC2Q8N2Y8 1516 aa27.65■■■□□ 2.02
SLC39A1-210ENST00000617697 KIF21BO75037 1637 aa27.63■■■□□ 2.01
SLC39A1-210ENST00000617697 CEP164Q9UPV0 1460 aa27.61■■■□□ 2.01
SLC39A1-210ENST00000617697 UBTFP17480 764 aaKnown RBP27.59■■■□□ 2.01
SLC39A1-210ENST00000617697 HMGXB3Q12766 1538 aa27.58■■■□□ 2.01
SLC39A1-210ENST00000617697 TOP2BQ02880 1626 aa27.5■■□□□ 1.99
SLC39A1-210ENST00000617697 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
SLC39A1-210ENST00000617697 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
SLC39A1-210ENST00000617697 CCER1Q8TC90 406 aaPredicted RBP27.33■■□□□ 1.97
SLC39A1-210ENST00000617697 CLIP1P30622 1438 aa27.32■■□□□ 1.96
SLC39A1-210ENST00000617697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.25■■□□□ 1.95
SLC39A1-210ENST00000617697 RAPGEF2Q9Y4G8 1499 aa27.24■■□□□ 1.95
SLC39A1-210ENST00000617697 ERICH3Q5RHP9 1530 aa27.24■■□□□ 1.95
SLC39A1-210ENST00000617697 VPS8Q8N3P4 1428 aa27.23■■□□□ 1.95
SLC39A1-210ENST00000617697 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
SLC39A1-210ENST00000617697 CFTRP13569 1480 aa27.19■■□□□ 1.94
SLC39A1-210ENST00000617697 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
SLC39A1-210ENST00000617697 CUX1P39880 1505 aa27.14■■□□□ 1.94
SLC39A1-210ENST00000617697 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
SLC39A1-210ENST00000617697 APLP2Q06481 763 aa27.09■■□□□ 1.93
SLC39A1-210ENST00000617697 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
SLC39A1-210ENST00000617697 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.89
SLC39A1-210ENST00000617697 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
SLC39A1-210ENST00000617697 RANGAP1P46060 587 aaPredicted RBP26.83■■□□□ 1.89
SLC39A1-210ENST00000617697 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
SLC39A1-210ENST00000617697 HNRNPUL2Q1KMD3 747 aaKnown RBP26.77■■□□□ 1.88
SLC39A1-210ENST00000617697 CUX2O14529 1486 aa26.75■■□□□ 1.87
SLC39A1-210ENST00000617697 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.87
SLC39A1-210ENST00000617697 DIEXFQ68CQ4 756 aaKnown RBP26.69■■□□□ 1.86
SLC39A1-210ENST00000617697 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
SLC39A1-210ENST00000617697 IGF1RP08069 1367 aa26.65■■□□□ 1.86
SLC39A1-210ENST00000617697 FANCD2Q9BXW9 1451 aa26.62■■□□□ 1.85
SLC39A1-210ENST00000617697 ZNF316A6NFI3 1004 aaPredicted RBP26.61■■□□□ 1.85
SLC39A1-210ENST00000617697 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
SLC39A1-210ENST00000617697 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.85
SLC39A1-210ENST00000617697 RRBP1Q9P2E9 1410 aaKnown RBP26.57■■□□□ 1.84
SLC39A1-210ENST00000617697 CLSPNQ9HAW4 1339 aa26.56■■□□□ 1.84
SLC39A1-210ENST00000617697 MAP3K1Q13233 1512 aa26.54■■□□□ 1.84
SLC39A1-210ENST00000617697 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
SLC39A1-210ENST00000617697 ABCA10Q8WWZ4 1543 aa26.47■■□□□ 1.83
SLC39A1-210ENST00000617697 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
SLC39A1-210ENST00000617697 TOPBP1Q92547 1522 aa26.45■■□□□ 1.82
SLC39A1-210ENST00000617697 CUL7Q14999 1698 aa26.44■■□□□ 1.82
SLC39A1-210ENST00000617697 FHAD1B1AJZ9 1412 aa26.43■■□□□ 1.82
SLC39A1-210ENST00000617697 CENPBP07199 599 aaPredicted RBP26.43■■□□□ 1.82
SLC39A1-210ENST00000617697 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
SLC39A1-210ENST00000617697 CCNB3Q8WWL7 1395 aa26.42■■□□□ 1.82
SLC39A1-210ENST00000617697 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
SLC39A1-210ENST00000617697 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.82
SLC39A1-210ENST00000617697 DHX57Q6P158 1386 aaKnown RBP26.38■■□□□ 1.81
SLC39A1-210ENST00000617697 ACIN1Q9UKV3 1341 aaKnown RBP26.37■■□□□ 1.81
SLC39A1-210ENST00000617697 EFCAB5A4FU69 1503 aa26.36■■□□□ 1.81
SLC39A1-210ENST00000617697 CFAP43Q8NDM7 1665 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms