RNA–Protein interactions for RNA: ENST00000617677.1

EIF5B-205, Transcript of eukaryotic translation initiation factor 5B, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EIF5B, Length 4,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF5B-205ENST00000617677 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.39□□□□□ -0.758e-33■□□□□ 10
EIF5B-205ENST00000617677 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.921e-20■■■■□ 25.6
EIF5B-205ENST00000617677 PCBP2Q15366 365 aaKnown RBP eCLIP10.61□□□□□ -0.712e-9■■■□□ 16.5
EIF5B-205ENST00000617677 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.512e-9■■□□□ 14.1
EIF5B-205ENST00000617677 RBM15Q96T37 977 aaKnown RBP eCLIP11.52□□□□□ -0.575e-9■■□□□ 11.4
EIF5B-205ENST00000617677 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.412e-8■□□□□ 10.9
EIF5B-205ENST00000617677 RBM22Q9NW64 420 aaKnown RBP eCLIP10.92□□□□□ -0.662e-8■■■■■ 35.1
EIF5B-205ENST00000617677 YBX3P16989 372 aaKnown RBP eCLIP10.94□□□□□ -0.665e-8■■■□□ 16.8
EIF5B-205ENST00000617677 TRA2AQ13595 282 aaKnown RBP eCLIP9.63□□□□□ -0.876e-8■■■■■ 48.4
EIF5B-205ENST00000617677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.157e-8■■■■□ 21.5
EIF5B-205ENST00000617677 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.237e-8■■■■□ 26.4
EIF5B-205ENST00000617677 EIF3HO15372 352 aaKnown RBP eCLIP11.96□□□□□ -0.491e-7■■□□□ 13.9
EIF5B-205ENST00000617677 HLTFQ14527 1009 aaKnown RBP eCLIP12.19□□□□□ -0.461e-7■■■□□ 14.9
EIF5B-205ENST00000617677 CPSF6Q16630 551 aaKnown RBP eCLIP10.62□□□□□ -0.712e-7■■■□□ 16.9
EIF5B-205ENST00000617677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.442e-7■■■■□ 22.7
EIF5B-205ENST00000617677 SF3B4Q15427 424 aaKnown RBP eCLIP10.85□□□□□ -0.672e-7■■■□□ 18.4
EIF5B-205ENST00000617677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.48□□□□□ -0.412e-7■■■■■ 33.5
EIF5B-205ENST00000617677 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.342e-7■■■■□ 23.1
EIF5B-205ENST00000617677 EIF3DO15371 548 aaKnown RBP eCLIP11.67□□□□□ -0.542e-7■□□□□ 8.6
EIF5B-205ENST00000617677 U2AF2P26368 475 aaKnown RBP eCLIP12.81□□□□□ -0.363e-7■■■■■ 34
EIF5B-205ENST00000617677 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.083e-7■■■■■ 27.1
EIF5B-205ENST00000617677 PUM1Q14671 1186 aaKnown RBP eCLIP10.27□□□□□ -0.773e-7■□□□□ 10.9
EIF5B-205ENST00000617677 SRSF1Q07955 248 aaKnown RBP eCLIP8.76□□□□□ -1.014e-7■■■■■ 38.2
EIF5B-205ENST00000617677 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.034e-7■■■■□ 25
EIF5B-205ENST00000617677 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.534e-7■□□□□ 9.6
EIF5B-205ENST00000617677 AARSP49588 968 aaKnown RBP eCLIP11.99□□□□□ -0.494e-7■■□□□ 11.4
EIF5B-205ENST00000617677 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.516e-7■■■□□ 14.7
EIF5B-205ENST00000617677 AGGF1Q8N302 714 aaeCLIP11.63□□□□□ -0.556e-7■■□□□ 14
EIF5B-205ENST00000617677 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.697e-7■■■□□ 18.4
EIF5B-205ENST00000617677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.83□□□□□ -0.688e-7■■□□□ 13.1
EIF5B-205ENST00000617677 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.349e-7■■■□□ 19.1
EIF5B-205ENST00000617677 SRSF7Q16629 238 aaKnown RBP eCLIP9.37□□□□□ -0.911e-6■□□□□ 10.2
EIF5B-205ENST00000617677 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.81e-6■■□□□ 12.7
EIF5B-205ENST00000617677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■□□□□ 9.3
EIF5B-205ENST00000617677 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 16.3
EIF5B-205ENST00000617677 PCBP1Q15365 356 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■□□□□ 9.6
EIF5B-205ENST00000617677 FXR2P51116 673 aaKnown RBP eCLIP11.8□□□□□ -0.521e-6■■■■■ 27.3
EIF5B-205ENST00000617677 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.59□□□□□ -0.392e-6■□□□□ 9.3
EIF5B-205ENST00000617677 PPIGQ13427 754 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■■□□□ 12.5
EIF5B-205ENST00000617677 LARP4Q71RC2 724 aaKnown RBP eCLIP10.74□□□□□ -0.692e-6■■■■□ 25.1
EIF5B-205ENST00000617677 SF3B1O75533 1304 aaKnown RBP eCLIP11.06□□□□□ -0.642e-6■■■■■ 85.2
EIF5B-205ENST00000617677 SUB1P53999 127 aaKnown RBP eCLIP9.19□□□□□ -0.943e-6■■■■■ 33.8
EIF5B-205ENST00000617677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.12□□□□□ -0.633e-6■□□□□ 10.7
EIF5B-205ENST00000617677 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.343e-6■■■■□ 22.7
EIF5B-205ENST00000617677 RBFOX2O43251 390 aaKnown RBP eCLIP9.45□□□□□ -0.93e-6■■□□□ 12.8
EIF5B-205ENST00000617677 NIPBLQ6KC79 2804 aaeCLIP6.39□□□□□ -1.395e-6■□□□□ 8.1
EIF5B-205ENST00000617677 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.195e-6■■■□□ 16.2
EIF5B-205ENST00000617677 PTBP1P26599 531 aaKnown RBP eCLIP10.38□□□□□ -0.755e-6■■■■□ 24.3
EIF5B-205ENST00000617677 HNRNPLP14866 589 aaKnown RBP eCLIP10.91□□□□□ -0.666e-6■■■□□ 18.9
EIF5B-205ENST00000617677 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.06□□□□□ -0.86e-6■■■□□ 19.1
Retrieved 50 of 50 RNA–protein pairs in 18 ms