RNA–Protein interactions for RNA: ENST00000617558.2

AL662899.3-202, humanhuman

TSL 1 (best) BASIC

Gene AL662899.3, Length 991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL662899.3-202ENST00000617558 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
AL662899.3-202ENST00000617558 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
AL662899.3-202ENST00000617558 ABCC9O60706 1549 aa23.66■■□□□ 1.38
AL662899.3-202ENST00000617558 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
AL662899.3-202ENST00000617558 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
AL662899.3-202ENST00000617558 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
AL662899.3-202ENST00000617558 NACADO15069 1562 aa23.18■■□□□ 1.3
AL662899.3-202ENST00000617558 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
AL662899.3-202ENST00000617558 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
AL662899.3-202ENST00000617558 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
AL662899.3-202ENST00000617558 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
AL662899.3-202ENST00000617558 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
AL662899.3-202ENST00000617558 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
AL662899.3-202ENST00000617558 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
AL662899.3-202ENST00000617558 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
AL662899.3-202ENST00000617558 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
AL662899.3-202ENST00000617558 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
AL662899.3-202ENST00000617558 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
AL662899.3-202ENST00000617558 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
AL662899.3-202ENST00000617558 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
AL662899.3-202ENST00000617558 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
AL662899.3-202ENST00000617558 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
AL662899.3-202ENST00000617558 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
AL662899.3-202ENST00000617558 ATAD2BQ9ULI0 1458 aa21.39■■□□□ 1.01
AL662899.3-202ENST00000617558 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
AL662899.3-202ENST00000617558 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
AL662899.3-202ENST00000617558 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
AL662899.3-202ENST00000617558 WIZO95785 1651 aa21.28■■□□□ 1
AL662899.3-202ENST00000617558 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
AL662899.3-202ENST00000617558 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
AL662899.3-202ENST00000617558 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
AL662899.3-202ENST00000617558 CCDC88BA6NC98 1476 aa20.82■□□□□ 0.92
AL662899.3-202ENST00000617558 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
AL662899.3-202ENST00000617558 CFTRP13569 1480 aa20.71■□□□□ 0.91
AL662899.3-202ENST00000617558 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
AL662899.3-202ENST00000617558 PRDM2Q13029 1718 aa20.66■□□□□ 0.9
AL662899.3-202ENST00000617558 NESP48681 1621 aa20.61■□□□□ 0.89
AL662899.3-202ENST00000617558 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
AL662899.3-202ENST00000617558 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
AL662899.3-202ENST00000617558 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
AL662899.3-202ENST00000617558 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
AL662899.3-202ENST00000617558 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
AL662899.3-202ENST00000617558 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
AL662899.3-202ENST00000617558 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
AL662899.3-202ENST00000617558 WDR62O43379 1518 aa20.29■□□□□ 0.84
AL662899.3-202ENST00000617558 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
AL662899.3-202ENST00000617558 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
AL662899.3-202ENST00000617558 DNMBPQ6XZF7 1577 aa20.23■□□□□ 0.83
AL662899.3-202ENST00000617558 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
AL662899.3-202ENST00000617558 CUX2O14529 1486 aa20.18■□□□□ 0.82
AL662899.3-202ENST00000617558 CUX1P39880 1505 aa20.17■□□□□ 0.82
AL662899.3-202ENST00000617558 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
AL662899.3-202ENST00000617558 WRNQ14191 1432 aaPredicted RBP eCLIP20.15■□□□□ 0.82
AL662899.3-202ENST00000617558 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
AL662899.3-202ENST00000617558 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
AL662899.3-202ENST00000617558 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
AL662899.3-202ENST00000617558 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
AL662899.3-202ENST00000617558 TARBP1Q13395 1621 aaKnown RBP19.99■□□□□ 0.79
AL662899.3-202ENST00000617558 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
AL662899.3-202ENST00000617558 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
AL662899.3-202ENST00000617558 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
AL662899.3-202ENST00000617558 SOGA1O94964 1423 aa19.89■□□□□ 0.77
AL662899.3-202ENST00000617558 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
AL662899.3-202ENST00000617558 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
AL662899.3-202ENST00000617558 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
AL662899.3-202ENST00000617558 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
AL662899.3-202ENST00000617558 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
AL662899.3-202ENST00000617558 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
AL662899.3-202ENST00000617558 GAPVD1Q14C86 1478 aa19.72■□□□□ 0.75
AL662899.3-202ENST00000617558 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
AL662899.3-202ENST00000617558 PBRM1Q86U86 1689 aa19.7■□□□□ 0.74
AL662899.3-202ENST00000617558 ERICH3Q5RHP9 1530 aa19.7■□□□□ 0.74
AL662899.3-202ENST00000617558 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
AL662899.3-202ENST00000617558 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.741e-13■■■■■ 27.9
AL662899.3-202ENST00000617558 GRIN2BQ13224 1484 aa19.68■□□□□ 0.74
AL662899.3-202ENST00000617558 MAGI1Q96QZ7 1491 aaPredicted RBP19.65■□□□□ 0.74
AL662899.3-202ENST00000617558 EEA1Q15075 1411 aa19.64■□□□□ 0.73
AL662899.3-202ENST00000617558 CUL7Q14999 1698 aa19.59■□□□□ 0.73
AL662899.3-202ENST00000617558 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
AL662899.3-202ENST00000617558 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
AL662899.3-202ENST00000617558 IGF1RP08069 1367 aa19.57■□□□□ 0.72
AL662899.3-202ENST00000617558 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
AL662899.3-202ENST00000617558 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
AL662899.3-202ENST00000617558 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
AL662899.3-202ENST00000617558 PRXQ9BXM0 1461 aa19.48■□□□□ 0.71
AL662899.3-202ENST00000617558 CHD1O14646 1710 aa19.47■□□□□ 0.71
AL662899.3-202ENST00000617558 GRIN2AQ12879 1464 aa19.44■□□□□ 0.7
AL662899.3-202ENST00000617558 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
AL662899.3-202ENST00000617558 KIF21BO75037 1637 aa19.42■□□□□ 0.7
AL662899.3-202ENST00000617558 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
AL662899.3-202ENST00000617558 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
AL662899.3-202ENST00000617558 NUP160Q12769 1436 aa19.38■□□□□ 0.69
AL662899.3-202ENST00000617558 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
AL662899.3-202ENST00000617558 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
AL662899.3-202ENST00000617558 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
AL662899.3-202ENST00000617558 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
AL662899.3-202ENST00000617558 CTTNBP2Q8WZ74 1663 aa19.26■□□□□ 0.67
AL662899.3-202ENST00000617558 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
AL662899.3-202ENST00000617558 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
AL662899.3-202ENST00000617558 SHROOM2Q13796 1616 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms