RNA–Protein interactions for RNA: ENST00000617480.4

GOLGA4-212, Transcript of golgin A4, humanhuman

TSL 5 BASIC

Gene GOLGA4, Length 1,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA4-212ENST00000617480 FMR1Q06787 632 aaKnown RBP eCLIP24.62■■□□□ 1.533e-15■■■■■ 74.8
GOLGA4-212ENST00000617480 HLTFQ14527 1009 aaKnown RBP eCLIP20.35■□□□□ 0.854e-15■■■□□ 17.6
GOLGA4-212ENST00000617480 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.76■■□□□ 1.553e-14■□□□□ 8.6
GOLGA4-212ENST00000617480 SF3B4Q15427 424 aaKnown RBP eCLIP18.43■□□□□ 0.541e-12■■□□□ 12.3
GOLGA4-212ENST00000617480 DDX3XO00571 662 aaKnown RBP eCLIP21.38■■□□□ 1.019e-12■■■□□ 18.4
GOLGA4-212ENST00000617480 HNRNPMP52272 730 aaKnown RBP eCLIP31.52■■■□□ 2.649e-12■■■□□ 18
GOLGA4-212ENST00000617480 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.62■■□□□ 1.212e-11■■■□□ 16.2
GOLGA4-212ENST00000617480 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.9■□□□□ 0.621e-10■□□□□ 11.3
GOLGA4-212ENST00000617480 QKIQ96PU8 341 aaKnown RBP eCLIP20.71■□□□□ 0.912e-10■■■■□ 21.1
GOLGA4-212ENST00000617480 DDX42Q86XP3 938 aaKnown RBP eCLIP21.38■■□□□ 1.013e-10■■□□□ 12
GOLGA4-212ENST00000617480 HNRNPLP14866 589 aaKnown RBP eCLIP20.96■□□□□ 0.952e-9■■■□□ 14.8
GOLGA4-212ENST00000617480 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.06■□□□□ 0.322e-9■■■□□ 17.7
GOLGA4-212ENST00000617480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.29■■□□□ 1.964e-9■■■■■ 29.7
GOLGA4-212ENST00000617480 PUM1Q14671 1186 aaKnown RBP eCLIP20.06■□□□□ 0.85e-9■□□□□ 8.1
GOLGA4-212ENST00000617480 CSTF2P33240 577 aaKnown RBP eCLIP19.75■□□□□ 0.758e-9■■■■□ 26.7
GOLGA4-212ENST00000617480 FXR2P51116 673 aaKnown RBP eCLIP22.97■■□□□ 1.271e-8■■■■□ 20.8
GOLGA4-212ENST00000617480 EFTUD2Q15029 972 aaKnown RBP eCLIP19.93■□□□□ 0.782e-8■□□□□ 10.5
GOLGA4-212ENST00000617480 KHSRPQ92945 711 aaKnown RBP eCLIP21.34■■□□□ 1.012e-8■■■■□ 26.5
GOLGA4-212ENST00000617480 ZRANB2O95218 330 aaKnown RBP eCLIP20.94■□□□□ 0.942e-8■■■■□ 19.9
GOLGA4-212ENST00000617480 TRA2AQ13595 282 aaKnown RBP eCLIP19.8■□□□□ 0.762e-8■■■□□ 18.4
GOLGA4-212ENST00000617480 TARDBPQ13148 414 aaKnown RBP eCLIP19.8■□□□□ 0.763e-8■■■■□ 20.5
GOLGA4-212ENST00000617480 SRSF1Q07955 248 aaKnown RBP eCLIP18.3■□□□□ 0.523e-8■■■□□ 14.9
GOLGA4-212ENST00000617480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.68■■■□□ 2.54e-8■■□□□ 13.4
GOLGA4-212ENST00000617480 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.44■■□□□ 1.025e-8■□□□□ 9.9
GOLGA4-212ENST00000617480 AQRO60306 1485 aaKnown RBP eCLIP34.78■■■■□ 3.166e-8■■■■□ 25.9
GOLGA4-212ENST00000617480 U2AF2P26368 475 aaKnown RBP eCLIP23.21■■□□□ 1.316e-8■■■■□ 25
GOLGA4-212ENST00000617480 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.52■□□□□ 0.568e-8■■□□□ 13.5
GOLGA4-212ENST00000617480 RBM15Q96T37 977 aaKnown RBP eCLIP20.59■□□□□ 0.891e-7■■■■□ 21.4
GOLGA4-212ENST00000617480 ILF3Q12906 894 aaKnown RBP eCLIP20.17■□□□□ 0.821e-7■■■■□ 21.9
GOLGA4-212ENST00000617480 ZNF622Q969S3 477 aaKnown RBP eCLIP25.78■■□□□ 1.721e-7■■□□□ 13.5
GOLGA4-212ENST00000617480 HNRNPA1P09651 372 aaKnown RBP eCLIP21.75■■□□□ 1.072e-7■■□□□ 14.2
GOLGA4-212ENST00000617480 RBM22Q9NW64 420 aaKnown RBP eCLIP20.72■□□□□ 0.913e-7■■■■■ 26.8
GOLGA4-212ENST00000617480 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.43■■□□□ 1.54e-7■■■□□ 14.6
GOLGA4-212ENST00000617480 NCBP2P52298 156 aaKnown RBP eCLIP19.01■□□□□ 0.636e-7■□□□□ 9.9
GOLGA4-212ENST00000617480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.88■■□□□ 1.097e-7■■■■■ 43.6
GOLGA4-212ENST00000617480 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.56■■□□□ 1.048e-7■■■□□ 15.2
GOLGA4-212ENST00000617480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.96■■□□□ 1.591e-6■■■■□ 20.2
GOLGA4-212ENST00000617480 U2AF1Q01081 240 aaKnown RBP eCLIP27.3■■□□□ 1.961e-6■■□□□ 12.2
GOLGA4-212ENST00000617480 SRSF7Q16629 238 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■□□□□ 9.1
GOLGA4-212ENST00000617480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.66■■□□□ 1.381e-6■□□□□ 9.8
GOLGA4-212ENST00000617480 PPIGQ13427 754 aaKnown RBP eCLIP22.72■■□□□ 1.231e-6■■■□□ 16.7
GOLGA4-212ENST00000617480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■■■ 29
GOLGA4-212ENST00000617480 TIA1P31483 386 aaKnown RBP eCLIP19.21■□□□□ 0.672e-6■□□□□ 10.3
GOLGA4-212ENST00000617480 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.73■□□□□ 0.592e-6■■□□□ 12.8
GOLGA4-212ENST00000617480 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.93■□□□□ 0.462e-6■■■□□ 15.8
GOLGA4-212ENST00000617480 SF3B1O75533 1304 aaKnown RBP eCLIP22.08■■□□□ 1.123e-6■■■■■ 61.1
GOLGA4-212ENST00000617480 NIPBLQ6KC79 2804 aaeCLIP16.73■□□□□ 0.273e-6■□□□□ 10.9
GOLGA4-212ENST00000617480 RBFOX2O43251 390 aaKnown RBP eCLIP16.19■□□□□ 0.185e-6■■■■□ 25.1
GOLGA4-212ENST00000617480 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.47■□□□□ 0.715e-6■■■■■ 43.9
GOLGA4-212ENST00000617480 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.22■□□□□ 0.837e-6■■■■■ 27.5
GOLGA4-212ENST00000617480 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.25■□□□□ 0.997e-6■■■□□ 17.5
GOLGA4-212ENST00000617480 HNRNPKP61978 463 aaKnown RBP eCLIP20.26■□□□□ 0.837e-6■■■■□ 19.6
GOLGA4-212ENST00000617480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.14■■■□□ 2.748e-6■□□□□ 10.5
GOLGA4-212ENST00000617480 CPSF6Q16630 551 aaKnown RBP eCLIP19.44■□□□□ 0.78e-6■□□□□ 9.2
Retrieved 54 of 54 RNA–protein pairs in 21.9 ms