RNA–Protein interactions for RNA: ENST00000617093.1

AF067845.2-201, humanhuman

TSL 1 (best) BASIC

Gene AF067845.2, Length 3,049 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF067845.2-201ENST00000617093 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
AF067845.2-201ENST00000617093 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
AF067845.2-201ENST00000617093 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
AF067845.2-201ENST00000617093 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
AF067845.2-201ENST00000617093 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
AF067845.2-201ENST00000617093 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
AF067845.2-201ENST00000617093 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
AF067845.2-201ENST00000617093 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
AF067845.2-201ENST00000617093 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
AF067845.2-201ENST00000617093 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
AF067845.2-201ENST00000617093 HRCP23327 699 aa19.48■□□□□ 0.71
AF067845.2-201ENST00000617093 PCGF6Q9BYE7 350 aa19.27■□□□□ 0.68
AF067845.2-201ENST00000617093 ABCC9O60706 1549 aa19.19■□□□□ 0.66
AF067845.2-201ENST00000617093 LOC105371045A0A1W2PR82 267 aa19■□□□□ 0.63
AF067845.2-201ENST00000617093 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
AF067845.2-201ENST00000617093 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
AF067845.2-201ENST00000617093 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
AF067845.2-201ENST00000617093 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
AF067845.2-201ENST00000617093 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
AF067845.2-201ENST00000617093 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
AF067845.2-201ENST00000617093 NACADO15069 1562 aa18.75■□□□□ 0.59
AF067845.2-201ENST00000617093 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
AF067845.2-201ENST00000617093 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
AF067845.2-201ENST00000617093 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
AF067845.2-201ENST00000617093 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.56
AF067845.2-201ENST00000617093 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
AF067845.2-201ENST00000617093 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
AF067845.2-201ENST00000617093 WIZO95785 1651 aa18.43■□□□□ 0.54
AF067845.2-201ENST00000617093 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
AF067845.2-201ENST00000617093 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
AF067845.2-201ENST00000617093 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
AF067845.2-201ENST00000617093 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
AF067845.2-201ENST00000617093 WRNQ14191 1432 aaPredicted RBP eCLIP18.14■□□□□ 0.49
AF067845.2-201ENST00000617093 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
AF067845.2-201ENST00000617093 EEA1Q15075 1411 aa18.13■□□□□ 0.49
AF067845.2-201ENST00000617093 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
AF067845.2-201ENST00000617093 CCDC88BA6NC98 1476 aa18.1■□□□□ 0.49
AF067845.2-201ENST00000617093 NEUROD1Q13562 356 aa18.08■□□□□ 0.49
AF067845.2-201ENST00000617093 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
AF067845.2-201ENST00000617093 CEP162Q5TB80 1403 aa18.05■□□□□ 0.48
AF067845.2-201ENST00000617093 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
AF067845.2-201ENST00000617093 TNIKQ9UKE5 1360 aa18.04■□□□□ 0.48
AF067845.2-201ENST00000617093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
AF067845.2-201ENST00000617093 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
AF067845.2-201ENST00000617093 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
AF067845.2-201ENST00000617093 SOGA1O94964 1423 aa17.94■□□□□ 0.46
AF067845.2-201ENST00000617093 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
AF067845.2-201ENST00000617093 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
AF067845.2-201ENST00000617093 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
AF067845.2-201ENST00000617093 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
AF067845.2-201ENST00000617093 ACIN1Q9UKV3 1341 aaKnown RBP17.88■□□□□ 0.45
AF067845.2-201ENST00000617093 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
AF067845.2-201ENST00000617093 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
AF067845.2-201ENST00000617093 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
AF067845.2-201ENST00000617093 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
AF067845.2-201ENST00000617093 KIF21BO75037 1637 aa17.79■□□□□ 0.44
AF067845.2-201ENST00000617093 RUSC2Q8N2Y8 1516 aa17.79■□□□□ 0.44
AF067845.2-201ENST00000617093 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
AF067845.2-201ENST00000617093 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
AF067845.2-201ENST00000617093 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
AF067845.2-201ENST00000617093 CLIP1P30622 1438 aa17.7■□□□□ 0.42
AF067845.2-201ENST00000617093 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
AF067845.2-201ENST00000617093 APLP2Q06481 763 aa17.68■□□□□ 0.42
AF067845.2-201ENST00000617093 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
AF067845.2-201ENST00000617093 VPS8Q8N3P4 1428 aa17.67■□□□□ 0.42
AF067845.2-201ENST00000617093 MYT1Q01538 1121 aa17.64■□□□□ 0.41
AF067845.2-201ENST00000617093 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
AF067845.2-201ENST00000617093 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
AF067845.2-201ENST00000617093 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
AF067845.2-201ENST00000617093 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
AF067845.2-201ENST00000617093 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
AF067845.2-201ENST00000617093 CLSPNQ9HAW4 1339 aa17.48■□□□□ 0.39
AF067845.2-201ENST00000617093 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
AF067845.2-201ENST00000617093 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
AF067845.2-201ENST00000617093 MIER1Q8N108 512 aa17.37■□□□□ 0.37
AF067845.2-201ENST00000617093 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
AF067845.2-201ENST00000617093 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
AF067845.2-201ENST00000617093 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
AF067845.2-201ENST00000617093 ARAP1Q96P48 1450 aa17.33■□□□□ 0.36
AF067845.2-201ENST00000617093 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
AF067845.2-201ENST00000617093 NCAPD3P42695 1498 aa17.29■□□□□ 0.36
AF067845.2-201ENST00000617093 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
AF067845.2-201ENST00000617093 RRBP1Q9P2E9 1410 aaKnown RBP17.27■□□□□ 0.35
AF067845.2-201ENST00000617093 CUX1P39880 1505 aa17.25■□□□□ 0.35
AF067845.2-201ENST00000617093 CUX2O14529 1486 aa17.21■□□□□ 0.35
AF067845.2-201ENST00000617093 CFTRP13569 1480 aa17.2■□□□□ 0.34
AF067845.2-201ENST00000617093 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
AF067845.2-201ENST00000617093 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
AF067845.2-201ENST00000617093 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
AF067845.2-201ENST00000617093 BCANQ96GW7 911 aa17.14■□□□□ 0.33
AF067845.2-201ENST00000617093 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
AF067845.2-201ENST00000617093 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
AF067845.2-201ENST00000617093 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
AF067845.2-201ENST00000617093 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
AF067845.2-201ENST00000617093 IGF1RP08069 1367 aa17.02■□□□□ 0.31
AF067845.2-201ENST00000617093 RAB3GAP2Q9H2M9 1393 aa17.01■□□□□ 0.31
AF067845.2-201ENST00000617093 ITGAEP38570 1179 aa17.01■□□□□ 0.31
AF067845.2-201ENST00000617093 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
AF067845.2-201ENST00000617093 SETD5Q9C0A6 1442 aa16.99■□□□□ 0.31
AF067845.2-201ENST00000617093 LRRC9Q6ZRR7 1453 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms