RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 NISCHQ9Y2I1 1504 aa36.92■■■■□ 3.5
UBXN1-218ENST00000616865 ABCC9O60706 1549 aa33.32■■■□□ 2.92
UBXN1-218ENST00000616865 CCDC180Q9P1Z9 1646 aa33.29■■■□□ 2.92
UBXN1-218ENST00000616865 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
UBXN1-218ENST00000616865 NACADO15069 1562 aa31.44■■■□□ 2.62
UBXN1-218ENST00000616865 DNAJC5BQ9UF47 199 aa31.3■■■□□ 2.6
UBXN1-218ENST00000616865 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
UBXN1-218ENST00000616865 UNC13AQ9UPW8 1703 aa31.05■■■□□ 2.56
UBXN1-218ENST00000616865 MYO15BQ96JP2 1530 aa30.98■■■□□ 2.55
UBXN1-218ENST00000616865 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
UBXN1-218ENST00000616865 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
UBXN1-218ENST00000616865 ZCCHC6Q5VYS8 1495 aaKnown RBP30.61■■■□□ 2.49
UBXN1-218ENST00000616865 DCAF1Q9Y4B6 1507 aa30.52■■■□□ 2.48
UBXN1-218ENST00000616865 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
UBXN1-218ENST00000616865 SCRIBQ14160 1630 aa30.26■■■□□ 2.44
UBXN1-218ENST00000616865 CC2D2AQ9P2K1 1620 aa30.14■■■□□ 2.41
UBXN1-218ENST00000616865 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
UBXN1-218ENST00000616865 CECR2Q9BXF3 1484 aa30.03■■■□□ 2.4
UBXN1-218ENST00000616865 NCAPD3P42695 1498 aa28.99■■■□□ 2.23
UBXN1-218ENST00000616865 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
UBXN1-218ENST00000616865 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
UBXN1-218ENST00000616865 DNAJC5Q9H3Z4 198 aa28.86■■■□□ 2.21
UBXN1-218ENST00000616865 SMARCA2P51531 1590 aa28.84■■■□□ 2.21
UBXN1-218ENST00000616865 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
UBXN1-218ENST00000616865 CUX2O14529 1486 aa28.81■■■□□ 2.2
UBXN1-218ENST00000616865 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
UBXN1-218ENST00000616865 BAZ1AQ9NRL2 1556 aaPredicted RBP28.7■■■□□ 2.18
UBXN1-218ENST00000616865 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
UBXN1-218ENST00000616865 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
UBXN1-218ENST00000616865 NESP48681 1621 aa28.58■■■□□ 2.17
UBXN1-218ENST00000616865 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.14
UBXN1-218ENST00000616865 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
UBXN1-218ENST00000616865 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
UBXN1-218ENST00000616865 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
UBXN1-218ENST00000616865 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
UBXN1-218ENST00000616865 WIZO95785 1651 aa28.12■■■□□ 2.09
UBXN1-218ENST00000616865 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
UBXN1-218ENST00000616865 MRC2Q9UBG0 1479 aa28■■■□□ 2.07
UBXN1-218ENST00000616865 WDR62O43379 1518 aa27.97■■■□□ 2.07
UBXN1-218ENST00000616865 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
UBXN1-218ENST00000616865 FANCD2Q9BXW9 1451 aa27.79■■■□□ 2.04
UBXN1-218ENST00000616865 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
UBXN1-218ENST00000616865 TOP2AP11388 1531 aaKnown RBP27.77■■■□□ 2.04
UBXN1-218ENST00000616865 CFTRP13569 1480 aa27.76■■■□□ 2.04
UBXN1-218ENST00000616865 PRDM2Q13029 1718 aa27.6■■■□□ 2.01
UBXN1-218ENST00000616865 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
UBXN1-218ENST00000616865 TRIM41Q8WV44 630 aa27.52■■■□□ 2
UBXN1-218ENST00000616865 CCDC88BA6NC98 1476 aa27.39■■□□□ 1.98
UBXN1-218ENST00000616865 OSCARQ8IYS5 282 aa27.36■■□□□ 1.97
UBXN1-218ENST00000616865 IFT140Q96RY7 1462 aa27.29■■□□□ 1.96
UBXN1-218ENST00000616865 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
UBXN1-218ENST00000616865 ZNF608Q9ULD9 1512 aaPredicted RBP27.25■■□□□ 1.95
UBXN1-218ENST00000616865 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
UBXN1-218ENST00000616865 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
UBXN1-218ENST00000616865 EIF4G3O43432 1585 aaKnown RBP27.17■■□□□ 1.94
UBXN1-218ENST00000616865 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
UBXN1-218ENST00000616865 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
UBXN1-218ENST00000616865 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
UBXN1-218ENST00000616865 TARBP1Q13395 1621 aaKnown RBP27.07■■□□□ 1.92
UBXN1-218ENST00000616865 ARHGEF11O15085 1522 aa27.03■■□□□ 1.92
UBXN1-218ENST00000616865 CHD1O14646 1710 aa27■■□□□ 1.91
UBXN1-218ENST00000616865 POLA1P09884 1462 aaPredicted RBP26.98■■□□□ 1.91
UBXN1-218ENST00000616865 AQRO60306 1485 aaKnown RBP eCLIP26.96■■□□□ 1.918e-8■■■■□ 24
UBXN1-218ENST00000616865 RAD54L2Q9Y4B4 1467 aa26.85■■□□□ 1.89
UBXN1-218ENST00000616865 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
UBXN1-218ENST00000616865 SOGA1O94964 1423 aa26.79■■□□□ 1.88
UBXN1-218ENST00000616865 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
UBXN1-218ENST00000616865 FBLN2P98095 1184 aa26.75■■□□□ 1.87
UBXN1-218ENST00000616865 CUX1P39880 1505 aa26.75■■□□□ 1.87
UBXN1-218ENST00000616865 ARAP1Q96P48 1450 aa26.74■■□□□ 1.87
UBXN1-218ENST00000616865 TDRD9Q8NDG6 1382 aaKnown RBP26.74■■□□□ 1.87
UBXN1-218ENST00000616865 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
UBXN1-218ENST00000616865 CYB5RLQ6IPT4 315 aa26.72■■□□□ 1.87
UBXN1-218ENST00000616865 CLASP1Q7Z460 1538 aa26.66■■□□□ 1.86
UBXN1-218ENST00000616865 MAGI1Q96QZ7 1491 aaPredicted RBP26.66■■□□□ 1.86
UBXN1-218ENST00000616865 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
UBXN1-218ENST00000616865 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
UBXN1-218ENST00000616865 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
UBXN1-218ENST00000616865 SYNJ2O15056 1496 aa26.56■■□□□ 1.84
UBXN1-218ENST00000616865 CHMP7Q8WUX9 453 aaPredicted RBP26.54■■□□□ 1.84
UBXN1-218ENST00000616865 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
UBXN1-218ENST00000616865 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
UBXN1-218ENST00000616865 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
UBXN1-218ENST00000616865 TRHP20396 242 aaPredicted RBP26.47■■□□□ 1.83
UBXN1-218ENST00000616865 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
UBXN1-218ENST00000616865 BIVM-ERCC5R4GMW8 1640 aa26.33■■□□□ 1.81
UBXN1-218ENST00000616865 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
UBXN1-218ENST00000616865 TOP2BQ02880 1626 aa26.3■■□□□ 1.8
UBXN1-218ENST00000616865 WRNQ14191 1432 aaPredicted RBP eCLIP26.3■■□□□ 1.8
UBXN1-218ENST00000616865 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
UBXN1-218ENST00000616865 CEP170Q5SW79 1584 aa26.23■■□□□ 1.79
UBXN1-218ENST00000616865 NUP160Q12769 1436 aa26.22■■□□□ 1.79
UBXN1-218ENST00000616865 ERCC6L2Q5T890 1561 aa26.21■■□□□ 1.79
UBXN1-218ENST00000616865 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
UBXN1-218ENST00000616865 SHROOM2Q13796 1616 aa26.16■■□□□ 1.78
UBXN1-218ENST00000616865 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
UBXN1-218ENST00000616865 RUSC2Q8N2Y8 1516 aa25.96■■□□□ 1.75
UBXN1-218ENST00000616865 PRG4Q92954 1404 aaPredicted RBP25.93■■□□□ 1.74
UBXN1-218ENST00000616865 KIF13AQ9H1H9 1805 aa25.9■■□□□ 1.74
UBXN1-218ENST00000616865 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms