RNA–Protein interactions for RNA: ENST00000616838.1

AC012676.4-201, humanhuman

BASIC

Gene AC012676.4, Length 582 nt, Biotype sense intronic.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012676.4-201ENST00000616838 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
AC012676.4-201ENST00000616838 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
AC012676.4-201ENST00000616838 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
AC012676.4-201ENST00000616838 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
AC012676.4-201ENST00000616838 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
AC012676.4-201ENST00000616838 ABCC9O60706 1549 aa22.83■■□□□ 1.25
AC012676.4-201ENST00000616838 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
AC012676.4-201ENST00000616838 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
AC012676.4-201ENST00000616838 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
AC012676.4-201ENST00000616838 NACADO15069 1562 aa21.69■■□□□ 1.06
AC012676.4-201ENST00000616838 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.06
AC012676.4-201ENST00000616838 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
AC012676.4-201ENST00000616838 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
AC012676.4-201ENST00000616838 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
AC012676.4-201ENST00000616838 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
AC012676.4-201ENST00000616838 BICRAQ9NZM4 1560 aa21.22■□□□□ 0.99
AC012676.4-201ENST00000616838 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
AC012676.4-201ENST00000616838 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
AC012676.4-201ENST00000616838 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
AC012676.4-201ENST00000616838 FOXD1Q16676 465 aa20.77■□□□□ 0.92
AC012676.4-201ENST00000616838 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
AC012676.4-201ENST00000616838 EIF4G1Q04637 1599 aaKnown RBP20.61■□□□□ 0.89
AC012676.4-201ENST00000616838 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
AC012676.4-201ENST00000616838 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
AC012676.4-201ENST00000616838 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
AC012676.4-201ENST00000616838 ADRA2BP18089 450 aa20.23■□□□□ 0.83
AC012676.4-201ENST00000616838 SMARCA4P51532 1647 aa20.18■□□□□ 0.82
AC012676.4-201ENST00000616838 MROH2BQ7Z745 1585 aa20.13■□□□□ 0.81
AC012676.4-201ENST00000616838 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
AC012676.4-201ENST00000616838 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
AC012676.4-201ENST00000616838 NCAPD3P42695 1498 aa20.08■□□□□ 0.81
AC012676.4-201ENST00000616838 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
AC012676.4-201ENST00000616838 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
AC012676.4-201ENST00000616838 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
AC012676.4-201ENST00000616838 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
AC012676.4-201ENST00000616838 WIZO95785 1651 aa19.89■□□□□ 0.77
AC012676.4-201ENST00000616838 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
AC012676.4-201ENST00000616838 NESP48681 1621 aa19.78■□□□□ 0.76
AC012676.4-201ENST00000616838 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
AC012676.4-201ENST00000616838 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
AC012676.4-201ENST00000616838 PIAS4Q8N2W9 510 aaPredicted RBP19.57■□□□□ 0.72
AC012676.4-201ENST00000616838 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
AC012676.4-201ENST00000616838 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
AC012676.4-201ENST00000616838 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
AC012676.4-201ENST00000616838 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
AC012676.4-201ENST00000616838 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
AC012676.4-201ENST00000616838 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
AC012676.4-201ENST00000616838 CFTRP13569 1480 aa19.38■□□□□ 0.69
AC012676.4-201ENST00000616838 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
AC012676.4-201ENST00000616838 CUX2O14529 1486 aa19.33■□□□□ 0.68
AC012676.4-201ENST00000616838 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
AC012676.4-201ENST00000616838 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
AC012676.4-201ENST00000616838 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
AC012676.4-201ENST00000616838 WDR62O43379 1518 aa19.17■□□□□ 0.66
AC012676.4-201ENST00000616838 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
AC012676.4-201ENST00000616838 PRDM2Q13029 1718 aa19.08■□□□□ 0.64
AC012676.4-201ENST00000616838 TOPBP1Q92547 1522 aa19■□□□□ 0.63
AC012676.4-201ENST00000616838 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
AC012676.4-201ENST00000616838 MSH5O43196 834 aa18.94■□□□□ 0.62
AC012676.4-201ENST00000616838 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
AC012676.4-201ENST00000616838 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
AC012676.4-201ENST00000616838 CUX1P39880 1505 aa18.87■□□□□ 0.61
AC012676.4-201ENST00000616838 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
AC012676.4-201ENST00000616838 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
AC012676.4-201ENST00000616838 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
AC012676.4-201ENST00000616838 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
AC012676.4-201ENST00000616838 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
AC012676.4-201ENST00000616838 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
AC012676.4-201ENST00000616838 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.6
AC012676.4-201ENST00000616838 SOGA1O94964 1423 aa18.76■□□□□ 0.59
AC012676.4-201ENST00000616838 TDRD9Q8NDG6 1382 aaKnown RBP18.75■□□□□ 0.59
AC012676.4-201ENST00000616838 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
AC012676.4-201ENST00000616838 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
AC012676.4-201ENST00000616838 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
AC012676.4-201ENST00000616838 WRNQ14191 1432 aaPredicted RBP eCLIP18.67■□□□□ 0.58
AC012676.4-201ENST00000616838 KCNA4P22459 653 aa18.62■□□□□ 0.57
AC012676.4-201ENST00000616838 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
AC012676.4-201ENST00000616838 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
AC012676.4-201ENST00000616838 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
AC012676.4-201ENST00000616838 FBLN2P98095 1184 aa18.57■□□□□ 0.56
AC012676.4-201ENST00000616838 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
AC012676.4-201ENST00000616838 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
AC012676.4-201ENST00000616838 SNAPC4Q5SXM2 1469 aa18.55■□□□□ 0.56
AC012676.4-201ENST00000616838 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.55
AC012676.4-201ENST00000616838 GRIN2BQ13224 1484 aa18.5■□□□□ 0.55
AC012676.4-201ENST00000616838 CHD1O14646 1710 aa18.49■□□□□ 0.55
AC012676.4-201ENST00000616838 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
AC012676.4-201ENST00000616838 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
AC012676.4-201ENST00000616838 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
AC012676.4-201ENST00000616838 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
AC012676.4-201ENST00000616838 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
AC012676.4-201ENST00000616838 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
AC012676.4-201ENST00000616838 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
AC012676.4-201ENST00000616838 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
AC012676.4-201ENST00000616838 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
AC012676.4-201ENST00000616838 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
AC012676.4-201ENST00000616838 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
AC012676.4-201ENST00000616838 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
AC012676.4-201ENST00000616838 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
AC012676.4-201ENST00000616838 GRIN2AQ12879 1464 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms