RNA–Protein interactions for RNA: ENST00000616566.4

PGM3-215, Transcript of phosphoglucomutase 3, humanhuman

TSL 2 BASIC

Gene PGM3, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-215ENST00000616566 SF3B4Q15427 424 aaKnown RBP eCLIP6.16□□□□□ -1.422e-16■■■□□ 14.8
PGM3-215ENST00000616566 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.82□□□□□ -1.322e-16■□□□□ 11.2
PGM3-215ENST00000616566 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.112e-16■■■■■ 53.7
PGM3-215ENST00000616566 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.04□□□□□ -1.448e-15■■□□□ 11.5
PGM3-215ENST00000616566 G3BP1Q13283 466 aaKnown RBP eCLIP7.6□□□□□ -1.192e-11■■■■■ 39.5
PGM3-215ENST00000616566 MATR3P43243 847 aaKnown RBP eCLIP7.16□□□□□ -1.261e-9■■■■□ 19.4
PGM3-215ENST00000616566 SMNDC1O75940 238 aaKnown RBP eCLIP6.69□□□□□ -1.343e-9■□□□□ 10.6
PGM3-215ENST00000616566 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.95□□□□□ -1.37e-9■□□□□ 10.1
PGM3-215ENST00000616566 SF3A3Q12874 501 aaKnown RBP eCLIP6.99□□□□□ -1.293e-8■■□□□ 13.1
PGM3-215ENST00000616566 GPKOWQ92917 476 aaPredicted RBP eCLIP7.15□□□□□ -1.263e-8■■■■□ 21
PGM3-215ENST00000616566 ZNF622Q969S3 477 aaKnown RBP eCLIP6.84□□□□□ -1.314e-8■■□□□ 12.8
PGM3-215ENST00000616566 RPS3P23396 243 aaKnown RBP eCLIP6.17□□□□□ -1.425e-8■■■□□ 14.8
PGM3-215ENST00000616566 PTBP1P26599 531 aaKnown RBP eCLIP5.95□□□□□ -1.461e-7■□□□□ 8.8
PGM3-215ENST00000616566 PABPC4Q13310 644 aaKnown RBP eCLIP6.97□□□□□ -1.292e-7■■■■□ 19.3
PGM3-215ENST00000616566 PPIGQ13427 754 aaKnown RBP eCLIP6.15□□□□□ -1.422e-7■■□□□ 12.3
PGM3-215ENST00000616566 UPF1Q92900 1129 aaKnown RBP eCLIP6.16□□□□□ -1.423e-7■□□□□ 8.3
PGM3-215ENST00000616566 KHSRPQ92945 711 aaKnown RBP eCLIP6.48□□□□□ -1.374e-7■■□□□ 13.1
PGM3-215ENST00000616566 ZRANB2O95218 330 aaKnown RBP eCLIP7.23□□□□□ -1.255e-7■■■■□ 19.7
PGM3-215ENST00000616566 U2AF2P26368 475 aaKnown RBP eCLIP7.5□□□□□ -1.215e-7■■■■■ 37.6
PGM3-215ENST00000616566 HNRNPLP14866 589 aaKnown RBP eCLIP6.47□□□□□ -1.378e-7■□□□□ 9.3
PGM3-215ENST00000616566 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.94□□□□□ -1.621e-6■■■■□ 25.3
PGM3-215ENST00000616566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.31□□□□□ -1.242e-6■■□□□ 12.7
PGM3-215ENST00000616566 YBX3P16989 372 aaKnown RBP eCLIP6.46□□□□□ -1.382e-6■■□□□ 13.5
PGM3-215ENST00000616566 QKIQ96PU8 341 aaKnown RBP eCLIP6.53□□□□□ -1.362e-6■■■□□ 14.6
PGM3-215ENST00000616566 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.35□□□□□ -1.392e-6■■■■□ 26.6
PGM3-215ENST00000616566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.48□□□□□ -1.053e-6■□□□□ 8.7
PGM3-215ENST00000616566 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■■■□□ 15.2
PGM3-215ENST00000616566 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.05□□□□□ -1.444e-6■■■□□ 19.2
PGM3-215ENST00000616566 HNRNPKP61978 463 aaKnown RBP eCLIP5.64□□□□□ -1.514e-6■■■■□ 20.4
PGM3-215ENST00000616566 RBM15Q96T37 977 aaKnown RBP eCLIP6.78□□□□□ -1.328e-6■□□□□ 11.1
PGM3-215ENST00000616566 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.66□□□□□ -1.189e-6■□□□□ 11.3
PGM3-215ENST00000616566 AQRO60306 1485 aaKnown RBP eCLIP8.71□□□□□ -1.029e-6■□□□□ 10.2
Retrieved 32 of 32 RNA–protein pairs in 8.6 ms