RNA–Protein interactions for RNA: ENST00000615911.4

MED29-207, Transcript of mediator complex subunit 29, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MED29, Length 3,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED29-207ENST00000615911 NISCHQ9Y2I1 1504 aa21.56■■□□□ 1.04
MED29-207ENST00000615911 HRCP23327 699 aa20.3■□□□□ 0.84
MED29-207ENST00000615911 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
MED29-207ENST00000615911 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
MED29-207ENST00000615911 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
MED29-207ENST00000615911 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.76
MED29-207ENST00000615911 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
MED29-207ENST00000615911 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
MED29-207ENST00000615911 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
MED29-207ENST00000615911 CHIC1Q5VXU3 224 aa19.38■□□□□ 0.69
MED29-207ENST00000615911 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
MED29-207ENST00000615911 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
MED29-207ENST00000615911 MYT1Q01538 1121 aa19.04■□□□□ 0.64
MED29-207ENST00000615911 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
MED29-207ENST00000615911 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
MED29-207ENST00000615911 NEUROD1Q13562 356 aa18.83■□□□□ 0.61
MED29-207ENST00000615911 ACIN1Q9UKV3 1341 aaKnown RBP18.82■□□□□ 0.6
MED29-207ENST00000615911 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
MED29-207ENST00000615911 CCDC180Q9P1Z9 1646 aa18.75■□□□□ 0.59
MED29-207ENST00000615911 DCAF8L2P0C7V8 631 aa18.61■□□□□ 0.57
MED29-207ENST00000615911 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.57
MED29-207ENST00000615911 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
MED29-207ENST00000615911 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
MED29-207ENST00000615911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
MED29-207ENST00000615911 DIEXFQ68CQ4 756 aaKnown RBP18.45■□□□□ 0.54
MED29-207ENST00000615911 YTHDC1Q96MU7 727 aaKnown RBP18.4■□□□□ 0.54
MED29-207ENST00000615911 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
MED29-207ENST00000615911 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.53
MED29-207ENST00000615911 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
MED29-207ENST00000615911 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
MED29-207ENST00000615911 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
MED29-207ENST00000615911 MIER1Q8N108 512 aa17.97■□□□□ 0.47
MED29-207ENST00000615911 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
MED29-207ENST00000615911 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
MED29-207ENST00000615911 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
MED29-207ENST00000615911 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
MED29-207ENST00000615911 TSHZ2Q9NRE2 1034 aa17.73■□□□□ 0.43
MED29-207ENST00000615911 BCANQ96GW7 911 aa17.59■□□□□ 0.41
MED29-207ENST00000615911 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
MED29-207ENST00000615911 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
MED29-207ENST00000615911 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
MED29-207ENST00000615911 ABCC9O60706 1549 aa17.45■□□□□ 0.38
MED29-207ENST00000615911 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
MED29-207ENST00000615911 PRKCSHP14314 528 aaPredicted RBP17.41■□□□□ 0.38
MED29-207ENST00000615911 UBTFP17480 764 aaKnown RBP17.34■□□□□ 0.37
MED29-207ENST00000615911 FKBP8Q14318 412 aa17.33■□□□□ 0.37
MED29-207ENST00000615911 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
MED29-207ENST00000615911 RBM19Q9Y4C8 960 aaKnown RBP17.31■□□□□ 0.36
MED29-207ENST00000615911 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
MED29-207ENST00000615911 ITGAEP38570 1179 aa17.28■□□□□ 0.36
MED29-207ENST00000615911 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.36
MED29-207ENST00000615911 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
MED29-207ENST00000615911 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
MED29-207ENST00000615911 MSH5O43196 834 aa17.17■□□□□ 0.34
MED29-207ENST00000615911 NEFLP07196 543 aa17.16■□□□□ 0.34
MED29-207ENST00000615911 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
MED29-207ENST00000615911 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
MED29-207ENST00000615911 APLP2Q06481 763 aa17.09■□□□□ 0.33
MED29-207ENST00000615911 SOGA1O94964 1423 aa17.07■□□□□ 0.32
MED29-207ENST00000615911 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
MED29-207ENST00000615911 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
MED29-207ENST00000615911 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
MED29-207ENST00000615911 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
MED29-207ENST00000615911 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
MED29-207ENST00000615911 DEKP35659 375 aaKnown RBP16.98■□□□□ 0.31
MED29-207ENST00000615911 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
MED29-207ENST00000615911 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
MED29-207ENST00000615911 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
MED29-207ENST00000615911 IRX6P78412 446 aaPredicted RBP16.95■□□□□ 0.3
MED29-207ENST00000615911 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
MED29-207ENST00000615911 WIZO95785 1651 aa16.92■□□□□ 0.3
MED29-207ENST00000615911 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
MED29-207ENST00000615911 NBR1Q14596 966 aa16.88■□□□□ 0.29
MED29-207ENST00000615911 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
MED29-207ENST00000615911 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
MED29-207ENST00000615911 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
MED29-207ENST00000615911 CLIP1P30622 1438 aa16.83■□□□□ 0.29
MED29-207ENST00000615911 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
MED29-207ENST00000615911 SALL2Q9Y467 1007 aaPredicted RBP16.79■□□□□ 0.28
MED29-207ENST00000615911 VPS8Q8N3P4 1428 aa16.75■□□□□ 0.27
MED29-207ENST00000615911 MYT1LQ9UL68 1186 aa16.75■□□□□ 0.27
MED29-207ENST00000615911 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
MED29-207ENST00000615911 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
MED29-207ENST00000615911 ANP32CO43423 234 aa16.73■□□□□ 0.27
MED29-207ENST00000615911 EEA1Q15075 1411 aa16.73■□□□□ 0.27
MED29-207ENST00000615911 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
MED29-207ENST00000615911 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
MED29-207ENST00000615911 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
MED29-207ENST00000615911 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
MED29-207ENST00000615911 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
MED29-207ENST00000615911 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
MED29-207ENST00000615911 NOP58Q9Y2X3 529 aaKnown RBP16.64■□□□□ 0.26
MED29-207ENST00000615911 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
MED29-207ENST00000615911 IL27Q8NEV9 243 aa16.63■□□□□ 0.25
MED29-207ENST00000615911 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
MED29-207ENST00000615911 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
MED29-207ENST00000615911 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
MED29-207ENST00000615911 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
MED29-207ENST00000615911 NACADO15069 1562 aa16.55■□□□□ 0.24
MED29-207ENST00000615911 PPP4R2Q9NY27 417 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms