RNA–Protein interactions for RNA: ENST00000615805.4

RELA-227, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5 BASIC

Gene RELA, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-227ENST00000615805 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
RELA-227ENST00000615805 CCDC180Q9P1Z9 1646 aa33.4■■■□□ 2.94
RELA-227ENST00000615805 ABCC9O60706 1549 aa32.01■■■□□ 2.71
RELA-227ENST00000615805 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
RELA-227ENST00000615805 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
RELA-227ENST00000615805 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.63
RELA-227ENST00000615805 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
RELA-227ENST00000615805 NACADO15069 1562 aa31.22■■■□□ 2.59
RELA-227ENST00000615805 RB1CC1Q8TDY2 1594 aa31.04■■■□□ 2.56
RELA-227ENST00000615805 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.53
RELA-227ENST00000615805 SCRIBQ14160 1630 aa30.68■■■□□ 2.5
RELA-227ENST00000615805 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
RELA-227ENST00000615805 BICRAQ9NZM4 1560 aa30.19■■■□□ 2.42
RELA-227ENST00000615805 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.414e-10■□□□□ 10.7
RELA-227ENST00000615805 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
RELA-227ENST00000615805 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
RELA-227ENST00000615805 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.3
RELA-227ENST00000615805 BAZ1AQ9NRL2 1556 aaPredicted RBP29.45■■■□□ 2.3
RELA-227ENST00000615805 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.3
RELA-227ENST00000615805 SMARCA4P51532 1647 aa29.39■■■□□ 2.29
RELA-227ENST00000615805 EIF4G1Q04637 1599 aaKnown RBP29.28■■■□□ 2.28
RELA-227ENST00000615805 WIZO95785 1651 aa29.19■■■□□ 2.26
RELA-227ENST00000615805 PEG3Q9GZU2 1588 aa29.05■■■□□ 2.24
RELA-227ENST00000615805 ATAD2BQ9ULI0 1458 aa29.03■■■□□ 2.24
RELA-227ENST00000615805 SMARCA2P51531 1590 aa28.95■■■□□ 2.23
RELA-227ENST00000615805 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.22
RELA-227ENST00000615805 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
RELA-227ENST00000615805 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
RELA-227ENST00000615805 BAZ1BQ9UIG0 1483 aaKnown RBP28.81■■■□□ 2.2
RELA-227ENST00000615805 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
RELA-227ENST00000615805 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.19
RELA-227ENST00000615805 CCDC88BA6NC98 1476 aa28.59■■■□□ 2.17
RELA-227ENST00000615805 CFTRP13569 1480 aa28.1■■■□□ 2.09
RELA-227ENST00000615805 CADPSQ9ULU8 1353 aa28.08■■■□□ 2.09
RELA-227ENST00000615805 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
RELA-227ENST00000615805 NESP48681 1621 aa28■■■□□ 2.07
RELA-227ENST00000615805 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
RELA-227ENST00000615805 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
RELA-227ENST00000615805 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
RELA-227ENST00000615805 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
RELA-227ENST00000615805 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
RELA-227ENST00000615805 PDS5BQ9NTI5 1447 aa27.7■■■□□ 2.02
RELA-227ENST00000615805 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
RELA-227ENST00000615805 KIF21AQ7Z4S6 1674 aa27.62■■■□□ 2.01
RELA-227ENST00000615805 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
RELA-227ENST00000615805 CEP164Q9UPV0 1460 aa27.6■■■□□ 2.01
RELA-227ENST00000615805 CUX1P39880 1505 aa27.57■■■□□ 2
RELA-227ENST00000615805 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
RELA-227ENST00000615805 BIVM-ERCC5R4GMW8 1640 aa27.48■■□□□ 1.99
RELA-227ENST00000615805 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
RELA-227ENST00000615805 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
RELA-227ENST00000615805 TOPBP1Q92547 1522 aa27.42■■□□□ 1.98
RELA-227ENST00000615805 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
RELA-227ENST00000615805 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
RELA-227ENST00000615805 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
RELA-227ENST00000615805 THOC2Q8NI27 1593 aaKnown RBP27.27■■□□□ 1.96
RELA-227ENST00000615805 POLA1P09884 1462 aaPredicted RBP27.26■■□□□ 1.95
RELA-227ENST00000615805 SOGA1O94964 1423 aa27.26■■□□□ 1.95
RELA-227ENST00000615805 WDR62O43379 1518 aa27.25■■□□□ 1.95
RELA-227ENST00000615805 RUSC2Q8N2Y8 1516 aa27.2■■□□□ 1.95
RELA-227ENST00000615805 FAM9AQ8IZU1 332 aaPredicted RBP27.2■■□□□ 1.95
RELA-227ENST00000615805 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
RELA-227ENST00000615805 CUX2O14529 1486 aa27.12■■□□□ 1.93
RELA-227ENST00000615805 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
RELA-227ENST00000615805 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
RELA-227ENST00000615805 EEA1Q15075 1411 aa27.04■■□□□ 1.92
RELA-227ENST00000615805 KIF27Q86VH2 1401 aa27.01■■□□□ 1.92
RELA-227ENST00000615805 WDR97A6NE52 1622 aa27■■□□□ 1.91
RELA-227ENST00000615805 CSRNP3Q8WYN3 585 aa27■■□□□ 1.91
RELA-227ENST00000615805 IFT140Q96RY7 1462 aa26.97■■□□□ 1.91
RELA-227ENST00000615805 TDRD9Q8NDG6 1382 aaKnown RBP26.96■■□□□ 1.91
RELA-227ENST00000615805 LOC105371045A0A1W2PR82 267 aa26.94■■□□□ 1.9
RELA-227ENST00000615805 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
RELA-227ENST00000615805 IGF1RP08069 1367 aa26.88■■□□□ 1.89
RELA-227ENST00000615805 ABCA5Q8WWZ7 1642 aa26.87■■□□□ 1.89
RELA-227ENST00000615805 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.895e-7■■■■■ 31.2
RELA-227ENST00000615805 GAPVD1Q14C86 1478 aa26.84■■□□□ 1.89
RELA-227ENST00000615805 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
RELA-227ENST00000615805 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
RELA-227ENST00000615805 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
RELA-227ENST00000615805 KIF21BO75037 1637 aa26.72■■□□□ 1.87
RELA-227ENST00000615805 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
RELA-227ENST00000615805 CARMIL1Q5VZK9 1371 aa26.71■■□□□ 1.87
RELA-227ENST00000615805 RAPGEF2Q9Y4G8 1499 aa26.7■■□□□ 1.87
RELA-227ENST00000615805 PBRM1Q86U86 1689 aa26.69■■□□□ 1.86
RELA-227ENST00000615805 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
RELA-227ENST00000615805 GOLGA3Q08378 1498 aa26.65■■□□□ 1.86
RELA-227ENST00000615805 CUL7Q14999 1698 aa26.63■■□□□ 1.85
RELA-227ENST00000615805 UBTFP17480 764 aaKnown RBP26.58■■□□□ 1.85
RELA-227ENST00000615805 SNAPC4Q5SXM2 1469 aa26.57■■□□□ 1.84
RELA-227ENST00000615805 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
RELA-227ENST00000615805 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
RELA-227ENST00000615805 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
RELA-227ENST00000615805 MAGI1Q96QZ7 1491 aaPredicted RBP26.5■■□□□ 1.83
RELA-227ENST00000615805 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
RELA-227ENST00000615805 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
RELA-227ENST00000615805 GRIN2AQ12879 1464 aa26.37■■□□□ 1.81
RELA-227ENST00000615805 FBLN2P98095 1184 aa26.36■■□□□ 1.81
RELA-227ENST00000615805 CEP162Q5TB80 1403 aa26.34■■□□□ 1.81
RELA-227ENST00000615805 RANGAP1P46060 587 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms