RNA–Protein interactions for RNA: ENST00000614059.4

RPS6KC1-208, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-208ENST00000614059 UPF2Q9HAU5 1272 aaKnown RBP18.68■□□□□ 0.58
RPS6KC1-208ENST00000614059 NEFMP07197 916 aa18.67■□□□□ 0.58
RPS6KC1-208ENST00000614059 WIZO95785 1651 aa18.66■□□□□ 0.58
RPS6KC1-208ENST00000614059 MTUS2Q5JR59 1369 aa18.66■□□□□ 0.58
RPS6KC1-208ENST00000614059 SOGA1O94964 1423 aa18.65■□□□□ 0.58
RPS6KC1-208ENST00000614059 NACADO15069 1562 aa18.65■□□□□ 0.58
RPS6KC1-208ENST00000614059 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.57
RPS6KC1-208ENST00000614059 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
RPS6KC1-208ENST00000614059 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
RPS6KC1-208ENST00000614059 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
RPS6KC1-208ENST00000614059 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
RPS6KC1-208ENST00000614059 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.6■□□□□ 0.57
RPS6KC1-208ENST00000614059 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
RPS6KC1-208ENST00000614059 ANP32BQ92688 251 aaKnown RBP18.59■□□□□ 0.57
RPS6KC1-208ENST00000614059 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
RPS6KC1-208ENST00000614059 RGL3Q3MIN7 710 aa18.55■□□□□ 0.56
RPS6KC1-208ENST00000614059 GOLGA3Q08378 1498 aa18.55■□□□□ 0.56
RPS6KC1-208ENST00000614059 TSHZ2Q9NRE2 1034 aa18.55■□□□□ 0.56
RPS6KC1-208ENST00000614059 PPP4R2Q9NY27 417 aa18.55■□□□□ 0.56
RPS6KC1-208ENST00000614059 BAZ1AQ9NRL2 1556 aaPredicted RBP18.54■□□□□ 0.56
RPS6KC1-208ENST00000614059 NOP58Q9Y2X3 529 aaKnown RBP18.5■□□□□ 0.55
RPS6KC1-208ENST00000614059 TSPY4P0CV99 314 aa18.49■□□□□ 0.55
RPS6KC1-208ENST00000614059 TSPY10P0CW01 314 aa18.49■□□□□ 0.55
RPS6KC1-208ENST00000614059 EEA1Q15075 1411 aa18.48■□□□□ 0.55
RPS6KC1-208ENST00000614059 RGS3P49796 1198 aa18.47■□□□□ 0.55
RPS6KC1-208ENST00000614059 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
RPS6KC1-208ENST00000614059 DEKP35659 375 aaKnown RBP18.46■□□□□ 0.55
RPS6KC1-208ENST00000614059 GLIPR1L2Q4G1C9 344 aa18.45■□□□□ 0.54
RPS6KC1-208ENST00000614059 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.549e-6■■■■■ 50.1
RPS6KC1-208ENST00000614059 KANK4Q5T7N3 995 aaPredicted RBP18.42■□□□□ 0.54
RPS6KC1-208ENST00000614059 RUSC2Q8N2Y8 1516 aa18.41■□□□□ 0.54
RPS6KC1-208ENST00000614059 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
RPS6KC1-208ENST00000614059 DDRGK1Q96HY6 314 aa18.38■□□□□ 0.53
RPS6KC1-208ENST00000614059 CARD11Q9BXL7 1154 aa18.38■□□□□ 0.53
RPS6KC1-208ENST00000614059 CCNB3Q8WWL7 1395 aa18.36■□□□□ 0.53
RPS6KC1-208ENST00000614059 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
RPS6KC1-208ENST00000614059 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
RPS6KC1-208ENST00000614059 BECN1Q14457 450 aa18.32■□□□□ 0.52
RPS6KC1-208ENST00000614059 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
RPS6KC1-208ENST00000614059 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
RPS6KC1-208ENST00000614059 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
RPS6KC1-208ENST00000614059 TRIM44Q96DX7 344 aaPredicted RBP18.3■□□□□ 0.52
RPS6KC1-208ENST00000614059 FOXD1Q16676 465 aa18.3■□□□□ 0.52
RPS6KC1-208ENST00000614059 CC2D1BQ5T0F9 858 aaKnown RBP18.3■□□□□ 0.52
RPS6KC1-208ENST00000614059 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
RPS6KC1-208ENST00000614059 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
RPS6KC1-208ENST00000614059 HSPA5P11021 654 aaKnown RBP18.27■□□□□ 0.52
RPS6KC1-208ENST00000614059 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
RPS6KC1-208ENST00000614059 TPRNQ4KMQ1 711 aa18.26■□□□□ 0.51
RPS6KC1-208ENST00000614059 KNSTRNQ9Y448 316 aa18.25■□□□□ 0.51
RPS6KC1-208ENST00000614059 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
RPS6KC1-208ENST00000614059 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
RPS6KC1-208ENST00000614059 CFDP1Q9UEE9 299 aaPredicted RBP18.24■□□□□ 0.51
RPS6KC1-208ENST00000614059 VPS8Q8N3P4 1428 aa18.22■□□□□ 0.51
RPS6KC1-208ENST00000614059 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
RPS6KC1-208ENST00000614059 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
RPS6KC1-208ENST00000614059 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
RPS6KC1-208ENST00000614059 SPRYD3Q8NCJ5 442 aa18.19■□□□□ 0.5
RPS6KC1-208ENST00000614059 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
RPS6KC1-208ENST00000614059 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
RPS6KC1-208ENST00000614059 PLEKHG5O94827 1062 aa18.17■□□□□ 0.5
RPS6KC1-208ENST00000614059 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
RPS6KC1-208ENST00000614059 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
RPS6KC1-208ENST00000614059 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
RPS6KC1-208ENST00000614059 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
RPS6KC1-208ENST00000614059 MYH16Q9H6N6 1097 aa18.16■□□□□ 0.5
RPS6KC1-208ENST00000614059 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
RPS6KC1-208ENST00000614059 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
RPS6KC1-208ENST00000614059 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
RPS6KC1-208ENST00000614059 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
RPS6KC1-208ENST00000614059 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
RPS6KC1-208ENST00000614059 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
RPS6KC1-208ENST00000614059 GOLGA6L22H0YM25 854 aa18.11■□□□□ 0.49
RPS6KC1-208ENST00000614059 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
RPS6KC1-208ENST00000614059 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
RPS6KC1-208ENST00000614059 SLKQ9H2G2 1235 aaPredicted RBP18.08■□□□□ 0.49
RPS6KC1-208ENST00000614059 PTMAP06454 111 aaKnown RBP18.07■□□□□ 0.48
RPS6KC1-208ENST00000614059 DNTTIP2Q5QJE6 756 aaKnown RBP18.06■□□□□ 0.48
RPS6KC1-208ENST00000614059 RCAN3Q9UKA8 241 aa18.06■□□□□ 0.48
RPS6KC1-208ENST00000614059 GZF1Q9H116 711 aaPredicted RBP18.05■□□□□ 0.48
RPS6KC1-208ENST00000614059 PLCB2Q00722 1185 aa18.04■□□□□ 0.48
RPS6KC1-208ENST00000614059 CFAP53Q96M91 514 aa18.04■□□□□ 0.48
RPS6KC1-208ENST00000614059 IPO9Q96P70 1041 aaKnown RBP18.02■□□□□ 0.48
RPS6KC1-208ENST00000614059 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
RPS6KC1-208ENST00000614059 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
RPS6KC1-208ENST00000614059 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
RPS6KC1-208ENST00000614059 CDCA8Q53HL2 280 aa18.01■□□□□ 0.47
RPS6KC1-208ENST00000614059 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
RPS6KC1-208ENST00000614059 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
RPS6KC1-208ENST00000614059 PKD2Q13563 968 aa18■□□□□ 0.47
RPS6KC1-208ENST00000614059 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
RPS6KC1-208ENST00000614059 HSP90AB1P08238 724 aaKnown RBP17.98■□□□□ 0.47
RPS6KC1-208ENST00000614059 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
RPS6KC1-208ENST00000614059 ZBTB7CA1YPR0 619 aa17.96■□□□□ 0.47
RPS6KC1-208ENST00000614059 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
RPS6KC1-208ENST00000614059 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
RPS6KC1-208ENST00000614059 TMF1P82094 1093 aa17.94■□□□□ 0.46
RPS6KC1-208ENST00000614059 MAPK8IP3Q9UPT6 1336 aa17.94■□□□□ 0.46
RPS6KC1-208ENST00000614059 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
RPS6KC1-208ENST00000614059 CUX2O14529 1486 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms