RNA–Protein interactions for RNA: ENST00000614056.4

PDCD2-215, Transcript of programmed cell death 2, human

TSL 2 BASIC

Gene PDCD2, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-215	ENST00000614056	AQR	O60306	1485 aa	Known RBP eCLIP	50.17	■■■■■ 5.62	9e-7	■■■■■ 36.8
PDCD2-215	ENST00000614056	RBM22	Q9NW64	420 aa	Known RBP eCLIP	27.32	■■□□□ 1.96	5e-8	■■■■■ 35.1
PDCD2-215	ENST00000614056	DDX3X	O00571	662 aa	Known RBP eCLIP	27.51	■■□□□ 1.99	3e-13	■■■■□ 26.3
PDCD2-215	ENST00000614056	EFTUD2	Q15029	972 aa	Known RBP eCLIP	25.49	■■□□□ 1.67	6e-8	■■■■□ 22.8
PDCD2-215	ENST00000614056	FMR1	Q06787	632 aa	Known RBP eCLIP	35.72	■■■■□ 3.31	9e-6	■■■■□ 20.6
PDCD2-215	ENST00000614056	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	23.79	■■□□□ 1.4	3e-7	■■■□□ 16.5
PDCD2-215	ENST00000614056	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	32.61	■■■□□ 2.81	1e-8	■■□□□ 14
PDCD2-215	ENST00000614056	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	45.55	■■■■■ 4.88	1e-6	■■□□□ 13.9
PDCD2-215	ENST00000614056	PABPC4	Q13310	644 aa	Known RBP eCLIP	33.62	■■■□□ 2.97	9e-8	■■□□□ 12.4
PDCD2-215	ENST00000614056	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	31.85	■■■□□ 2.69	1e-6	■□□□□ 11.3
PDCD2-215	ENST00000614056	ZC3H11A	O75152	810 aa	Known RBP eCLIP	30.82	■■■□□ 2.52	4e-7	■□□□□ 11.2
PDCD2-215	ENST00000614056	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	31.71	■■■□□ 2.67	1e-8	■□□□□ 11.2
PDCD2-215	ENST00000614056	LSM11	P83369	360 aa	Known RBP eCLIP	23.96	■■□□□ 1.43	4e-9	■□□□□ 9.9
PDCD2-215	ENST00000614056	SF3B4	Q15427	424 aa	Known RBP eCLIP	25.09	■■□□□ 1.61	3e-8	■□□□□ 9.9
PDCD2-215	ENST00000614056	NCBP2	P52298	156 aa	Known RBP eCLIP	24.83	■■□□□ 1.57	7e-9	■□□□□ 9.6
PDCD2-215	ENST00000614056	DDX6	P26196	483 aa	Known RBP eCLIP	29.52	■■■□□ 2.32	6e-7	■□□□□ 8.8
PDCD2-215	ENST00000614056	FXR2	P51116	673 aa	Known RBP eCLIP	30.26	■■■□□ 2.43	1e-6	■□□□□ 8.7
PDCD2-215	ENST00000614056	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	34.35	■■■■□ 3.09	1e-10	■□□□□ 8.2

Retrieved 18 of 18 RNA–protein pairs in 54.5 ms