RNA–Protein interactions for RNA: ENST00000613965.1

MFGE8-216, Transcript of milk fat globule-EGF factor 8 protein, humanhuman

TSL 5

Gene MFGE8, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFGE8-216ENST00000613965 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
MFGE8-216ENST00000613965 CCDC180Q9P1Z9 1646 aa23■■□□□ 1.27
MFGE8-216ENST00000613965 ABCC9O60706 1549 aa22.92■■□□□ 1.26
MFGE8-216ENST00000613965 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
MFGE8-216ENST00000613965 NACADO15069 1562 aa21.71■■□□□ 1.07
MFGE8-216ENST00000613965 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
MFGE8-216ENST00000613965 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
MFGE8-216ENST00000613965 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
MFGE8-216ENST00000613965 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
MFGE8-216ENST00000613965 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
MFGE8-216ENST00000613965 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
MFGE8-216ENST00000613965 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
MFGE8-216ENST00000613965 DCAF1Q9Y4B6 1507 aa21.16■□□□□ 0.98
MFGE8-216ENST00000613965 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
MFGE8-216ENST00000613965 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
MFGE8-216ENST00000613965 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
MFGE8-216ENST00000613965 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
MFGE8-216ENST00000613965 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.89
MFGE8-216ENST00000613965 NCAPD3P42695 1498 aa20.03■□□□□ 0.8
MFGE8-216ENST00000613965 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
MFGE8-216ENST00000613965 ATAD2BQ9ULI0 1458 aa19.98■□□□□ 0.79
MFGE8-216ENST00000613965 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
MFGE8-216ENST00000613965 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
MFGE8-216ENST00000613965 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
MFGE8-216ENST00000613965 PEG3Q9GZU2 1588 aa19.79■□□□□ 0.76
MFGE8-216ENST00000613965 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
MFGE8-216ENST00000613965 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
MFGE8-216ENST00000613965 CUX2O14529 1486 aa19.74■□□□□ 0.75
MFGE8-216ENST00000613965 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
MFGE8-216ENST00000613965 NESP48681 1621 aa19.71■□□□□ 0.75
MFGE8-216ENST00000613965 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
MFGE8-216ENST00000613965 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
MFGE8-216ENST00000613965 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
MFGE8-216ENST00000613965 WIZO95785 1651 aa19.52■□□□□ 0.71
MFGE8-216ENST00000613965 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
MFGE8-216ENST00000613965 PDS5BQ9NTI5 1447 aa19.44■□□□□ 0.7
MFGE8-216ENST00000613965 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
MFGE8-216ENST00000613965 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
MFGE8-216ENST00000613965 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
MFGE8-216ENST00000613965 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
MFGE8-216ENST00000613965 WDR62O43379 1518 aa19.25■□□□□ 0.67
MFGE8-216ENST00000613965 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
MFGE8-216ENST00000613965 CFTRP13569 1480 aa19.22■□□□□ 0.67
MFGE8-216ENST00000613965 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
MFGE8-216ENST00000613965 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
MFGE8-216ENST00000613965 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
MFGE8-216ENST00000613965 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
MFGE8-216ENST00000613965 TOPBP1Q92547 1522 aa18.85■□□□□ 0.61
MFGE8-216ENST00000613965 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
MFGE8-216ENST00000613965 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
MFGE8-216ENST00000613965 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
MFGE8-216ENST00000613965 ZNF608Q9ULD9 1512 aaPredicted RBP18.8■□□□□ 0.6
MFGE8-216ENST00000613965 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
MFGE8-216ENST00000613965 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
MFGE8-216ENST00000613965 EIF4G3O43432 1585 aaKnown RBP18.73■□□□□ 0.59
MFGE8-216ENST00000613965 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.58
MFGE8-216ENST00000613965 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
MFGE8-216ENST00000613965 AQRO60306 1485 aaKnown RBP eCLIP18.63■□□□□ 0.574e-8■■■■■ 43.8
MFGE8-216ENST00000613965 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
MFGE8-216ENST00000613965 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
MFGE8-216ENST00000613965 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
MFGE8-216ENST00000613965 CHD1O14646 1710 aa18.6■□□□□ 0.57
MFGE8-216ENST00000613965 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
MFGE8-216ENST00000613965 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
MFGE8-216ENST00000613965 SOGA1O94964 1423 aa18.55■□□□□ 0.56
MFGE8-216ENST00000613965 CUX1P39880 1505 aa18.54■□□□□ 0.56
MFGE8-216ENST00000613965 FGD5Q6ZNL6 1462 aa18.54■□□□□ 0.56
MFGE8-216ENST00000613965 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
MFGE8-216ENST00000613965 WDR97A6NE52 1622 aa18.5■□□□□ 0.55
MFGE8-216ENST00000613965 FBLN2P98095 1184 aa18.48■□□□□ 0.55
MFGE8-216ENST00000613965 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
MFGE8-216ENST00000613965 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
MFGE8-216ENST00000613965 MAGI1Q96QZ7 1491 aaPredicted RBP18.4■□□□□ 0.54
MFGE8-216ENST00000613965 GRIN2BQ13224 1484 aa18.39■□□□□ 0.54
MFGE8-216ENST00000613965 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
MFGE8-216ENST00000613965 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
MFGE8-216ENST00000613965 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
MFGE8-216ENST00000613965 CLASP1Q7Z460 1538 aa18.36■□□□□ 0.53
MFGE8-216ENST00000613965 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
MFGE8-216ENST00000613965 SYNJ2O15056 1496 aa18.34■□□□□ 0.53
MFGE8-216ENST00000613965 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
MFGE8-216ENST00000613965 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
MFGE8-216ENST00000613965 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.53
MFGE8-216ENST00000613965 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
MFGE8-216ENST00000613965 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.52
MFGE8-216ENST00000613965 TOP2BQ02880 1626 aa18.27■□□□□ 0.51
MFGE8-216ENST00000613965 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
MFGE8-216ENST00000613965 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
MFGE8-216ENST00000613965 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
MFGE8-216ENST00000613965 TRHP20396 242 aaPredicted RBP18.16■□□□□ 0.5
MFGE8-216ENST00000613965 CEP170Q5SW79 1584 aa18.13■□□□□ 0.49
MFGE8-216ENST00000613965 NUP160Q12769 1436 aa18.11■□□□□ 0.49
MFGE8-216ENST00000613965 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
MFGE8-216ENST00000613965 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
MFGE8-216ENST00000613965 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.48
MFGE8-216ENST00000613965 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
MFGE8-216ENST00000613965 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
MFGE8-216ENST00000613965 PRG4Q92954 1404 aaPredicted RBP17.92■□□□□ 0.46
MFGE8-216ENST00000613965 JPH4Q96JJ6 628 aa17.89■□□□□ 0.45
MFGE8-216ENST00000613965 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms