RNA–Protein interactions for RNA: ENST00000613864.4

TARDBP-215, Transcript of TAR DNA binding protein, humanhuman

TSL 4

Gene TARDBP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-215ENST00000613864 DDX3XO00571 662 aaKnown RBP eCLIP14.2□□□□□ -0.141e-28■■■■■ 35.7
TARDBP-215ENST00000613864 NCBP2P52298 156 aaKnown RBP eCLIP12.77□□□□□ -0.371e-12■■■□□ 17.9
TARDBP-215ENST00000613864 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.77□□□□□ -0.376e-11■■■■□ 22.8
TARDBP-215ENST00000613864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.64■■□□□ 1.212e-10■■■□□ 15
TARDBP-215ENST00000613864 SF3B4Q15427 424 aaKnown RBP eCLIP13.04□□□□□ -0.325e-10■□□□□ 8.2
TARDBP-215ENST00000613864 G3BP1Q13283 466 aaKnown RBP eCLIP17.65■□□□□ 0.425e-9■□□□□ 10.1
TARDBP-215ENST00000613864 RPS3P23396 243 aaKnown RBP eCLIP13.59□□□□□ -0.233e-8■□□□□ 11
TARDBP-215ENST00000613864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.471e-7■■■■■ 34.9
TARDBP-215ENST00000613864 RBM22Q9NW64 420 aaKnown RBP eCLIP14.14□□□□□ -0.151e-7■■■■■ 31.6
TARDBP-215ENST00000613864 DDX6P26196 483 aaKnown RBP eCLIP15.46■□□□□ 0.071e-7■■■■□ 26.6
TARDBP-215ENST00000613864 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.08■□□□□ 02e-7■■■■□ 23.7
TARDBP-215ENST00000613864 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.883e-7■■□□□ 14.2
TARDBP-215ENST00000613864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.98■□□□□ 0.795e-7■■□□□ 12.9
TARDBP-215ENST00000613864 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.756e-7■□□□□ 11.3
TARDBP-215ENST00000613864 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.357e-7■■□□□ 12.4
TARDBP-215ENST00000613864 RBM15Q96T37 977 aaKnown RBP eCLIP14.47□□□□□ -0.099e-7■■■□□ 18.3
TARDBP-215ENST00000613864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.01■■□□□ 1.271e-6■■■□□ 15.4
TARDBP-215ENST00000613864 PPIGQ13427 754 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■□□□□ 8.5
TARDBP-215ENST00000613864 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.81□□□□□ -0.22e-6■□□□□ 9.9
TARDBP-215ENST00000613864 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.59□□□□□ -0.232e-6■■■■□ 26
Retrieved 20 of 20 RNA–protein pairs in 8.7 ms