RNA–Protein interactions for RNA: ENST00000613560.1

AC008567.3-201, humanhuman

TSL 1 (best)

Gene AC008567.3, Length 595 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008567.3-201ENST00000613560 NISCHQ9Y2I1 1504 aa46.59■■■■■ 5.05
AC008567.3-201ENST00000613560 ABCC9O60706 1549 aa41.99■■■■■ 4.31
AC008567.3-201ENST00000613560 CCDC180Q9P1Z9 1646 aa41.77■■■■■ 4.28
AC008567.3-201ENST00000613560 RB1CC1Q8TDY2 1594 aa39.84■■■■□ 3.97
AC008567.3-201ENST00000613560 NACADO15069 1562 aa39.55■■■■□ 3.92
AC008567.3-201ENST00000613560 DNAJC5BQ9UF47 199 aa39.52■■■■□ 3.92
AC008567.3-201ENST00000613560 DCAF8L2P0C7V8 631 aa39.45■■■■□ 3.91
AC008567.3-201ENST00000613560 PABPN1Q86U42 306 aaKnown RBP eCLIP39.12■■■■□ 3.85
AC008567.3-201ENST00000613560 UNC13AQ9UPW8 1703 aa38.94■■■■□ 3.82
AC008567.3-201ENST00000613560 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
AC008567.3-201ENST00000613560 BICRAQ9NZM4 1560 aa38.74■■■■□ 3.79
AC008567.3-201ENST00000613560 ZCCHC6Q5VYS8 1495 aaKnown RBP38.59■■■■□ 3.77
AC008567.3-201ENST00000613560 DCAF1Q9Y4B6 1507 aa38.43■■■■□ 3.74
AC008567.3-201ENST00000613560 SCRIBQ14160 1630 aa38.15■■■■□ 3.7
AC008567.3-201ENST00000613560 SHROOM4Q9ULL8 1493 aa38.11■■■■□ 3.69
AC008567.3-201ENST00000613560 CC2D2AQ9P2K1 1620 aa37.89■■■■□ 3.66
AC008567.3-201ENST00000613560 CECR2Q9BXF3 1484 aa37.81■■■■□ 3.64
AC008567.3-201ENST00000613560 EIF4G1Q04637 1599 aaKnown RBP37.78■■■■□ 3.64
AC008567.3-201ENST00000613560 NCAPD3P42695 1498 aa36.54■■■■□ 3.44
AC008567.3-201ENST00000613560 ATAD2BQ9ULI0 1458 aa36.43■■■■□ 3.42
AC008567.3-201ENST00000613560 SMARCA4P51532 1647 aa36.35■■■■□ 3.41
AC008567.3-201ENST00000613560 DNAJC5Q9H3Z4 198 aa36.31■■■■□ 3.4
AC008567.3-201ENST00000613560 SMARCA2P51531 1590 aa36.28■■■■□ 3.4
AC008567.3-201ENST00000613560 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
AC008567.3-201ENST00000613560 HMGXB3Q12766 1538 aa36.23■■■■□ 3.39
AC008567.3-201ENST00000613560 CUX2O14529 1486 aa36.16■■■■□ 3.38
AC008567.3-201ENST00000613560 BAZ1AQ9NRL2 1556 aaPredicted RBP36.15■■■■□ 3.38
AC008567.3-201ENST00000613560 BAZ1BQ9UIG0 1483 aaKnown RBP36.06■■■■□ 3.36
AC008567.3-201ENST00000613560 NESP48681 1621 aa36.05■■■■□ 3.36
AC008567.3-201ENST00000613560 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
AC008567.3-201ENST00000613560 MROH2BQ7Z745 1585 aa35.93■■■■□ 3.34
AC008567.3-201ENST00000613560 LAMC3Q9Y6N6 1575 aa35.7■■■■□ 3.31
AC008567.3-201ENST00000613560 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
AC008567.3-201ENST00000613560 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
AC008567.3-201ENST00000613560 PDS5BQ9NTI5 1447 aa35.52■■■■□ 3.28
AC008567.3-201ENST00000613560 WIZO95785 1651 aa35.48■■■■□ 3.27
AC008567.3-201ENST00000613560 CADPSQ9ULU8 1353 aa35.44■■■■□ 3.26
AC008567.3-201ENST00000613560 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
AC008567.3-201ENST00000613560 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
AC008567.3-201ENST00000613560 WDR62O43379 1518 aa35.13■■■■□ 3.21
AC008567.3-201ENST00000613560 CEP164Q9UPV0 1460 aa35.08■■■■□ 3.21
AC008567.3-201ENST00000613560 FANCD2Q9BXW9 1451 aa35.04■■■■□ 3.2
AC008567.3-201ENST00000613560 CFTRP13569 1480 aa35.01■■■■□ 3.19
AC008567.3-201ENST00000613560 TOP2AP11388 1531 aaKnown RBP35■■■■□ 3.19
AC008567.3-201ENST00000613560 URB2Q14146 1524 aaKnown RBP34.77■■■■□ 3.16
AC008567.3-201ENST00000613560 TRIM41Q8WV44 630 aa34.72■■■■□ 3.15
AC008567.3-201ENST00000613560 CCDC88BA6NC98 1476 aa34.64■■■■□ 3.14
AC008567.3-201ENST00000613560 PRDM2Q13029 1718 aa34.58■■■■□ 3.13
AC008567.3-201ENST00000613560 OSCARQ8IYS5 282 aa34.54■■■■□ 3.12
AC008567.3-201ENST00000613560 ZNF608Q9ULD9 1512 aaPredicted RBP34.38■■■■□ 3.09
AC008567.3-201ENST00000613560 TOPBP1Q92547 1522 aa34.37■■■■□ 3.09
AC008567.3-201ENST00000613560 IFT140Q96RY7 1462 aa34.37■■■■□ 3.09
AC008567.3-201ENST00000613560 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
AC008567.3-201ENST00000613560 DNMBPQ6XZF7 1577 aa34.2■■■■□ 3.07
AC008567.3-201ENST00000613560 EIF4G3O43432 1585 aaKnown RBP34.13■■■■□ 3.05
AC008567.3-201ENST00000613560 RIMBP3CA6NJZ7 1639 aa34.08■■■■□ 3.05
AC008567.3-201ENST00000613560 RIMBP3BA6NNM3 1639 aa34.08■■■■□ 3.05
AC008567.3-201ENST00000613560 RIMBP3Q9UFD9 1639 aa34.08■■■■□ 3.05
AC008567.3-201ENST00000613560 AQRO60306 1485 aaKnown RBP eCLIP34.06■■■■□ 3.04
AC008567.3-201ENST00000613560 TARBP1Q13395 1621 aaKnown RBP34.05■■■■□ 3.04
AC008567.3-201ENST00000613560 POLA1P09884 1462 aaPredicted RBP34.01■■■■□ 3.04
AC008567.3-201ENST00000613560 ARHGEF11O15085 1522 aa33.97■■■■□ 3.03
AC008567.3-201ENST00000613560 RAD54L2Q9Y4B4 1467 aa33.93■■■■□ 3.02
AC008567.3-201ENST00000613560 CHD1O14646 1710 aa33.89■■■■□ 3.02
AC008567.3-201ENST00000613560 SOGA1O94964 1423 aa33.87■■■■□ 3.01
AC008567.3-201ENST00000613560 FBLN2P98095 1184 aa33.86■■■■□ 3.01
AC008567.3-201ENST00000613560 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
AC008567.3-201ENST00000613560 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
AC008567.3-201ENST00000613560 CYB5RLQ6IPT4 315 aa33.78■■■■□ 3
AC008567.3-201ENST00000613560 CUX1P39880 1505 aa33.76■■■■□ 3
AC008567.3-201ENST00000613560 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
AC008567.3-201ENST00000613560 ARAP1Q96P48 1450 aa33.65■■■□□ 2.98
AC008567.3-201ENST00000613560 WDR97A6NE52 1622 aa33.63■■■□□ 2.97
AC008567.3-201ENST00000613560 SUPT5HO00267 1087 aaKnown RBP33.58■■■□□ 2.97
AC008567.3-201ENST00000613560 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.96
AC008567.3-201ENST00000613560 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
AC008567.3-201ENST00000613560 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
AC008567.3-201ENST00000613560 CLASP1Q7Z460 1538 aa33.51■■■□□ 2.95
AC008567.3-201ENST00000613560 SYNJ2O15056 1496 aa33.46■■■□□ 2.95
AC008567.3-201ENST00000613560 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
AC008567.3-201ENST00000613560 GAPVD1Q14C86 1478 aa33.44■■■□□ 2.94
AC008567.3-201ENST00000613560 TRHP20396 242 aaPredicted RBP33.42■■■□□ 2.94
AC008567.3-201ENST00000613560 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
AC008567.3-201ENST00000613560 ABCA10Q8WWZ4 1543 aa33.38■■■□□ 2.93
AC008567.3-201ENST00000613560 ABCA5Q8WWZ7 1642 aa33.33■■■□□ 2.93
AC008567.3-201ENST00000613560 WRNQ14191 1432 aaPredicted RBP eCLIP33.24■■■□□ 2.91
AC008567.3-201ENST00000613560 TOP2BQ02880 1626 aa33.15■■■□□ 2.9
AC008567.3-201ENST00000613560 BIVM-ERCC5R4GMW8 1640 aa33.14■■■□□ 2.9
AC008567.3-201ENST00000613560 GRIN2AQ12879 1464 aa33.13■■■□□ 2.89
AC008567.3-201ENST00000613560 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
AC008567.3-201ENST00000613560 ERCC6L2Q5T890 1561 aa33.04■■■□□ 2.88
AC008567.3-201ENST00000613560 NUP160Q12769 1436 aa33.03■■■□□ 2.88
AC008567.3-201ENST00000613560 CEP170Q5SW79 1584 aa33.03■■■□□ 2.88
AC008567.3-201ENST00000613560 FHAD1B1AJZ9 1412 aa33.01■■■□□ 2.87
AC008567.3-201ENST00000613560 ERICH3Q5RHP9 1530 aa32.95■■■□□ 2.87
AC008567.3-201ENST00000613560 SHROOM2Q13796 1616 aa32.86■■■□□ 2.85
AC008567.3-201ENST00000613560 PRG4Q92954 1404 aaPredicted RBP32.74■■■□□ 2.83
AC008567.3-201ENST00000613560 JPH4Q96JJ6 628 aa32.72■■■□□ 2.83
AC008567.3-201ENST00000613560 RUSC2Q8N2Y8 1516 aa32.62■■■□□ 2.81
AC008567.3-201ENST00000613560 IGF1RP08069 1367 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms