RNA–Protein interactions for RNA: ENST00000612493.4

NCOA6-206, Transcript of nuclear receptor coactivator 6, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA6, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA6-206ENST00000612493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.93■□□□□ 0.462e-6■■■■■ 110.3
NCOA6-206ENST00000612493 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.97■□□□□ 0.155e-6■■■■■ 81.8
NCOA6-206ENST00000612493 FUBP3Q96I24 572 aaKnown RBP eCLIP15.62■□□□□ 0.094e-14■■■■■ 78.9
NCOA6-206ENST00000612493 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.55■□□□□ 0.245e-8■■■■■ 65.3
NCOA6-206ENST00000612493 U2AF2P26368 475 aaKnown RBP eCLIP18.24■□□□□ 0.513e-16■■■■■ 48.3
NCOA6-206ENST00000612493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.87□□□□□ -0.192e-8■■■■■ 42.7
NCOA6-206ENST00000612493 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.98e-12■■■■■ 42.3
NCOA6-206ENST00000612493 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.15■□□□□ 0.022e-9■■■■■ 40.2
NCOA6-206ENST00000612493 SF3B1O75533 1304 aaKnown RBP eCLIP15.79■□□□□ 0.125e-6■■■■■ 39
NCOA6-206ENST00000612493 DDX3XO00571 662 aaKnown RBP eCLIP17.03■□□□□ 0.321e-7■■■■■ 31.5
NCOA6-206ENST00000612493 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.059e-8■■■■■ 30.5
NCOA6-206ENST00000612493 QKIQ96PU8 341 aaKnown RBP eCLIP16.06■□□□□ 0.161e-7■■■■□ 25.5
NCOA6-206ENST00000612493 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.6■□□□□ 0.571e-7■■■■□ 24.7
NCOA6-206ENST00000612493 HNRNPMP52272 730 aaKnown RBP eCLIP21.53■■□□□ 1.048e-7■■■■□ 23.7
NCOA6-206ENST00000612493 GTF2F1P35269 517 aaKnown RBP eCLIP18■□□□□ 0.478e-7■■■■□ 23.1
NCOA6-206ENST00000612493 RBFOX2O43251 390 aaKnown RBP eCLIP12.99□□□□□ -0.332e-11■■■■□ 22.5
NCOA6-206ENST00000612493 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.99■□□□□ 0.154e-7■■■■□ 21.6
NCOA6-206ENST00000612493 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.05■□□□□ 0.322e-10■■■■□ 21.2
NCOA6-206ENST00000612493 EFTUD2Q15029 972 aaKnown RBP eCLIP16.63■□□□□ 0.256e-7■■■■□ 19.6
NCOA6-206ENST00000612493 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■■□ 19.3
NCOA6-206ENST00000612493 PRPF4O43172 522 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■■■□□ 18.9
NCOA6-206ENST00000612493 MATR3P43243 847 aaKnown RBP eCLIP18.08■□□□□ 0.493e-6■■■□□ 17.9
NCOA6-206ENST00000612493 ILF3Q12906 894 aaKnown RBP eCLIP15.02□□□□□ -0.013e-7■■■□□ 17
NCOA6-206ENST00000612493 PPIGQ13427 754 aaKnown RBP eCLIP15.19■□□□□ 0.023e-8■■■□□ 17
NCOA6-206ENST00000612493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.73■□□□□ 0.752e-6■■■□□ 16.6
NCOA6-206ENST00000612493 PCBP2Q15366 365 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■■■□□ 15.8
NCOA6-206ENST00000612493 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.61■□□□□ 0.091e-7■■■□□ 15.2
NCOA6-206ENST00000612493 FXR2P51116 673 aaKnown RBP eCLIP17.17■□□□□ 0.345e-6■■■□□ 14.9
NCOA6-206ENST00000612493 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.6■□□□□ 0.096e-6■■□□□ 14.4
NCOA6-206ENST00000612493 RBM15Q96T37 977 aaKnown RBP eCLIP16.82■□□□□ 0.281e-6■■□□□ 14.4
NCOA6-206ENST00000612493 PTBP1P26599 531 aaKnown RBP eCLIP14.1□□□□□ -0.152e-10■■□□□ 14
NCOA6-206ENST00000612493 SF3B4Q15427 424 aaKnown RBP eCLIP14.81□□□□□ -0.041e-7■■□□□ 13.7
NCOA6-206ENST00000612493 RBM22Q9NW64 420 aaKnown RBP eCLIP16.26■□□□□ 0.195e-6■■□□□ 13.6
NCOA6-206ENST00000612493 HNRNPKP61978 463 aaKnown RBP eCLIP14.52□□□□□ -0.084e-7■■□□□ 13.5
NCOA6-206ENST00000612493 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.84■□□□□ 0.452e-8■■□□□ 13.3
NCOA6-206ENST00000612493 KHSRPQ92945 711 aaKnown RBP eCLIP16.14■□□□□ 0.187e-7■■□□□ 12.8
NCOA6-206ENST00000612493 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.44□□□□□ -0.17e-7■■□□□ 12.7
NCOA6-206ENST00000612493 EIF3HO15372 352 aaKnown RBP eCLIP16.93■□□□□ 0.37e-7■■□□□ 12.6
NCOA6-206ENST00000612493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.55e-7■■□□□ 12.4
NCOA6-206ENST00000612493 ZNF622Q969S3 477 aaKnown RBP eCLIP18.11■□□□□ 0.493e-6■□□□□ 11.2
NCOA6-206ENST00000612493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.48■□□□□ 0.231e-9■□□□□ 11.1
NCOA6-206ENST00000612493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.898e-8■□□□□ 10.8
NCOA6-206ENST00000612493 SF3A3Q12874 501 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■□□□□ 10.2
NCOA6-206ENST00000612493 HNRNPLP14866 589 aaKnown RBP eCLIP16.23■□□□□ 0.192e-7■□□□□ 10
NCOA6-206ENST00000612493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.124e-9■□□□□ 9.7
NCOA6-206ENST00000612493 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.41□□□□□ -0.16e-6■□□□□ 8.6
NCOA6-206ENST00000612493 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■□□□□ 8.5
Retrieved 47 of 47 RNA–protein pairs in 11.7 ms