RNA–Protein interactions for RNA: ENST00000612492.4

PMP22-209, Transcript of peripheral myelin protein 22, humanhuman

APPRIS P1 TSL 3 BASIC

Gene PMP22, Length 1,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-209ENST00000612492 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
PMP22-209ENST00000612492 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
PMP22-209ENST00000612492 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
PMP22-209ENST00000612492 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
PMP22-209ENST00000612492 DCAF1Q9Y4B6 1507 aa27.28■■□□□ 1.96
PMP22-209ENST00000612492 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
PMP22-209ENST00000612492 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
PMP22-209ENST00000612492 MYO15BQ96JP2 1530 aa26.63■■□□□ 1.85
PMP22-209ENST00000612492 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
PMP22-209ENST00000612492 ABCC9O60706 1549 aa26.21■■□□□ 1.79
PMP22-209ENST00000612492 NACADO15069 1562 aa26.2■■□□□ 1.78
PMP22-209ENST00000612492 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
PMP22-209ENST00000612492 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
PMP22-209ENST00000612492 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
PMP22-209ENST00000612492 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
PMP22-209ENST00000612492 MROH2BQ7Z745 1585 aa25.51■■□□□ 1.67
PMP22-209ENST00000612492 BAZ1AQ9NRL2 1556 aaPredicted RBP25.38■■□□□ 1.65
PMP22-209ENST00000612492 WIZO95785 1651 aa25.32■■□□□ 1.64
PMP22-209ENST00000612492 LOC105371045A0A1W2PR82 267 aa25.28■■□□□ 1.64
PMP22-209ENST00000612492 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
PMP22-209ENST00000612492 UNC13AQ9UPW8 1703 aa25.23■■□□□ 1.63
PMP22-209ENST00000612492 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
PMP22-209ENST00000612492 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
PMP22-209ENST00000612492 HRCP23327 699 aa25.02■■□□□ 1.6
PMP22-209ENST00000612492 PCGF6Q9BYE7 350 aa25.02■■□□□ 1.6
PMP22-209ENST00000612492 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
PMP22-209ENST00000612492 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
PMP22-209ENST00000612492 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.58
PMP22-209ENST00000612492 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
PMP22-209ENST00000612492 TRIM26Q12899 539 aaPredicted RBP24.83■■□□□ 1.57
PMP22-209ENST00000612492 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
PMP22-209ENST00000612492 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
PMP22-209ENST00000612492 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
PMP22-209ENST00000612492 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
PMP22-209ENST00000612492 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
PMP22-209ENST00000612492 EEA1Q15075 1411 aa24.49■■□□□ 1.51
PMP22-209ENST00000612492 BAZ1BQ9UIG0 1483 aaKnown RBP24.44■■□□□ 1.5
PMP22-209ENST00000612492 EHMT2Q96KQ7 1210 aa24.4■■□□□ 1.5
PMP22-209ENST00000612492 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
PMP22-209ENST00000612492 SOGA1O94964 1423 aa24.35■■□□□ 1.49
PMP22-209ENST00000612492 ZEB1P37275 1124 aaPredicted RBP24.31■■□□□ 1.48
PMP22-209ENST00000612492 CSRNP3Q8WYN3 585 aa24.31■■□□□ 1.48
PMP22-209ENST00000612492 TNIKQ9UKE5 1360 aa24.3■■□□□ 1.48
PMP22-209ENST00000612492 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
PMP22-209ENST00000612492 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
PMP22-209ENST00000612492 SYNJ1O43426 1573 aa24.21■■□□□ 1.47
PMP22-209ENST00000612492 RUSC2Q8N2Y8 1516 aa24.21■■□□□ 1.47
PMP22-209ENST00000612492 HMGXB3Q12766 1538 aa24.2■■□□□ 1.46
PMP22-209ENST00000612492 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
PMP22-209ENST00000612492 GOLGA3Q08378 1498 aa24.16■■□□□ 1.46
PMP22-209ENST00000612492 KIF21BO75037 1637 aa24.09■■□□□ 1.45
PMP22-209ENST00000612492 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
PMP22-209ENST00000612492 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
PMP22-209ENST00000612492 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
PMP22-209ENST00000612492 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
PMP22-209ENST00000612492 CFTRP13569 1480 aa23.9■■□□□ 1.42
PMP22-209ENST00000612492 CLIP1P30622 1438 aa23.82■■□□□ 1.4
PMP22-209ENST00000612492 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
PMP22-209ENST00000612492 CUX1P39880 1505 aa23.79■■□□□ 1.4
PMP22-209ENST00000612492 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
PMP22-209ENST00000612492 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
PMP22-209ENST00000612492 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
PMP22-209ENST00000612492 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
PMP22-209ENST00000612492 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
PMP22-209ENST00000612492 CCER1Q8TC90 406 aaPredicted RBP23.68■■□□□ 1.38
PMP22-209ENST00000612492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
PMP22-209ENST00000612492 CADPSQ9ULU8 1353 aa23.66■■□□□ 1.38
PMP22-209ENST00000612492 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.37
PMP22-209ENST00000612492 CC2D2AQ9P2K1 1620 aa23.58■■□□□ 1.36
PMP22-209ENST00000612492 APLP2Q06481 763 aa23.55■■□□□ 1.36
PMP22-209ENST00000612492 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
PMP22-209ENST00000612492 IGF1RP08069 1367 aa23.43■■□□□ 1.34
PMP22-209ENST00000612492 CUX2O14529 1486 aa23.41■■□□□ 1.34
PMP22-209ENST00000612492 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.33
PMP22-209ENST00000612492 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
PMP22-209ENST00000612492 RANGAP1P46060 587 aaPredicted RBP23.37■■□□□ 1.33
PMP22-209ENST00000612492 ARHGAP35Q9NRY4 1499 aa23.32■■□□□ 1.32
PMP22-209ENST00000612492 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
PMP22-209ENST00000612492 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
PMP22-209ENST00000612492 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
PMP22-209ENST00000612492 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
PMP22-209ENST00000612492 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
PMP22-209ENST00000612492 LAMC3Q9Y6N6 1575 aa23.2■■□□□ 1.3
PMP22-209ENST00000612492 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
PMP22-209ENST00000612492 KANK4Q5T7N3 995 aaPredicted RBP23.19■■□□□ 1.3
PMP22-209ENST00000612492 RRBP1Q9P2E9 1410 aaKnown RBP23.19■■□□□ 1.3
PMP22-209ENST00000612492 POLA1P09884 1462 aaPredicted RBP23.16■■□□□ 1.3
PMP22-209ENST00000612492 NESP48681 1621 aa23.14■■□□□ 1.29
PMP22-209ENST00000612492 CLSPNQ9HAW4 1339 aa23.13■■□□□ 1.29
PMP22-209ENST00000612492 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
PMP22-209ENST00000612492 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
PMP22-209ENST00000612492 CUL7Q14999 1698 aa23.09■■□□□ 1.29
PMP22-209ENST00000612492 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
PMP22-209ENST00000612492 FHAD1B1AJZ9 1412 aa23.07■■□□□ 1.28
PMP22-209ENST00000612492 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
PMP22-209ENST00000612492 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
PMP22-209ENST00000612492 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
PMP22-209ENST00000612492 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
PMP22-209ENST00000612492 EFCAB5A4FU69 1503 aa23.01■■□□□ 1.27
PMP22-209ENST00000612492 WDR97A6NE52 1622 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms