RNA–Protein interactions for RNA: ENST00000612023.1

LINC02139-201, Transcript of long intergenic non-protein coding RNA 2139, humanhuman

TSL 1 (best) BASIC

Gene LINC02139, Length 2,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02139-201ENST00000612023 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
LINC02139-201ENST00000612023 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
LINC02139-201ENST00000612023 NISCHQ9Y2I1 1504 aa24.19■■□□□ 1.46
LINC02139-201ENST00000612023 PHF23Q9BUL5 403 aaPredicted RBP24.1■■□□□ 1.45
LINC02139-201ENST00000612023 SENP3Q9H4L4 574 aaPredicted RBP23.3■■□□□ 1.32
LINC02139-201ENST00000612023 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.22
LINC02139-201ENST00000612023 SLC24A1O60721 1099 aa22.39■■□□□ 1.17
LINC02139-201ENST00000612023 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
LINC02139-201ENST00000612023 KCNA4P22459 653 aa21.62■■□□□ 1.05
LINC02139-201ENST00000612023 FOXD1Q16676 465 aa21.62■■□□□ 1.05
LINC02139-201ENST00000612023 ABCC9O60706 1549 aa21.53■■□□□ 1.04
LINC02139-201ENST00000612023 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
LINC02139-201ENST00000612023 CSRNP3Q8WYN3 585 aa21.44■■□□□ 1.02
LINC02139-201ENST00000612023 ADRA2BP18089 450 aa21.14■□□□□ 0.98
LINC02139-201ENST00000612023 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.98
LINC02139-201ENST00000612023 RTN4Q9NQC3 1192 aaKnown RBP21.12■□□□□ 0.97
LINC02139-201ENST00000612023 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
LINC02139-201ENST00000612023 AMER1Q5JTC6 1135 aaPredicted RBP20.81■□□□□ 0.92
LINC02139-201ENST00000612023 SLC4A1APQ9BWU0 796 aaKnown RBP20.79■□□□□ 0.92
LINC02139-201ENST00000612023 PIAS4Q8N2W9 510 aaPredicted RBP20.48■□□□□ 0.87
LINC02139-201ENST00000612023 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
LINC02139-201ENST00000612023 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
LINC02139-201ENST00000612023 NACADO15069 1562 aa20.15■□□□□ 0.82
LINC02139-201ENST00000612023 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
LINC02139-201ENST00000612023 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
LINC02139-201ENST00000612023 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
LINC02139-201ENST00000612023 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
LINC02139-201ENST00000612023 ZBTB22O15209 634 aa20.03■□□□□ 0.8
LINC02139-201ENST00000612023 DNAJC5Q9H3Z4 198 aa19.86■□□□□ 0.77
LINC02139-201ENST00000612023 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.77
LINC02139-201ENST00000612023 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
LINC02139-201ENST00000612023 MSH5O43196 834 aa19.73■□□□□ 0.75
LINC02139-201ENST00000612023 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
LINC02139-201ENST00000612023 PRKCSHP14314 528 aaPredicted RBP19.64■□□□□ 0.73
LINC02139-201ENST00000612023 BICRAQ9NZM4 1560 aa19.62■□□□□ 0.73
LINC02139-201ENST00000612023 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
LINC02139-201ENST00000612023 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
LINC02139-201ENST00000612023 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
LINC02139-201ENST00000612023 CC2D2AQ9P2K1 1620 aa19.45■□□□□ 0.7
LINC02139-201ENST00000612023 SHROOM4Q9ULL8 1493 aa19.45■□□□□ 0.7
LINC02139-201ENST00000612023 DAXXQ9UER7 740 aaPredicted RBP19.35■□□□□ 0.69
LINC02139-201ENST00000612023 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
LINC02139-201ENST00000612023 TAOK2Q9UL54 1235 aa19.24■□□□□ 0.67
LINC02139-201ENST00000612023 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
LINC02139-201ENST00000612023 FKBP8Q14318 412 aa19.19■□□□□ 0.66
LINC02139-201ENST00000612023 PLCB2Q00722 1185 aa19.18■□□□□ 0.66
LINC02139-201ENST00000612023 BCANQ96GW7 911 aa19.15■□□□□ 0.66
LINC02139-201ENST00000612023 FOXD4L1Q9NU39 408 aa19.13■□□□□ 0.65
LINC02139-201ENST00000612023 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.65
LINC02139-201ENST00000612023 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.65
LINC02139-201ENST00000612023 CUX2O14529 1486 aa19.04■□□□□ 0.64
LINC02139-201ENST00000612023 HAP1P54257 671 aaPredicted RBP18.92■□□□□ 0.62
LINC02139-201ENST00000612023 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
LINC02139-201ENST00000612023 TPRNQ4KMQ1 711 aa18.91■□□□□ 0.62
LINC02139-201ENST00000612023 ARXQ96QS3 562 aa18.8■□□□□ 0.6
LINC02139-201ENST00000612023 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.59
LINC02139-201ENST00000612023 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
LINC02139-201ENST00000612023 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
LINC02139-201ENST00000612023 TULP1O00294 542 aaPredicted RBP18.69■□□□□ 0.58
LINC02139-201ENST00000612023 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
LINC02139-201ENST00000612023 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
LINC02139-201ENST00000612023 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
LINC02139-201ENST00000612023 RNF216Q9NWF9 866 aaPredicted RBP18.61■□□□□ 0.57
LINC02139-201ENST00000612023 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
LINC02139-201ENST00000612023 PEG3Q9GZU2 1588 aa18.58■□□□□ 0.57
LINC02139-201ENST00000612023 VSIG10Q8N0Z9 540 aa18.57■□□□□ 0.56
LINC02139-201ENST00000612023 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
LINC02139-201ENST00000612023 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
LINC02139-201ENST00000612023 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
LINC02139-201ENST00000612023 HMGXB3Q12766 1538 aa18.51■□□□□ 0.55
LINC02139-201ENST00000612023 RSF1Q96T23 1441 aaPredicted RBP18.46■□□□□ 0.55
LINC02139-201ENST00000612023 WIZO95785 1651 aa18.46■□□□□ 0.55
LINC02139-201ENST00000612023 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
LINC02139-201ENST00000612023 HOXD11P31277 338 aaPredicted RBP18.44■□□□□ 0.54
LINC02139-201ENST00000612023 KDM2AQ9Y2K7 1162 aa18.38■□□□□ 0.53
LINC02139-201ENST00000612023 GTF3C3Q9Y5Q9 886 aa18.33■□□□□ 0.52
LINC02139-201ENST00000612023 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
LINC02139-201ENST00000612023 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
LINC02139-201ENST00000612023 HOMEZQ8IX15 550 aa18.28■□□□□ 0.52
LINC02139-201ENST00000612023 NESP48681 1621 aa18.23■□□□□ 0.51
LINC02139-201ENST00000612023 FBLN2P98095 1184 aa18.23■□□□□ 0.51
LINC02139-201ENST00000612023 ATXN8OSP0DMR3 200 aa18.15■□□□□ 0.5
LINC02139-201ENST00000612023 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
LINC02139-201ENST00000612023 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
LINC02139-201ENST00000612023 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
LINC02139-201ENST00000612023 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
LINC02139-201ENST00000612023 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
LINC02139-201ENST00000612023 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
LINC02139-201ENST00000612023 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
LINC02139-201ENST00000612023 TMEM132AQ24JP5 1023 aa17.96■□□□□ 0.47
LINC02139-201ENST00000612023 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
LINC02139-201ENST00000612023 CFTRP13569 1480 aa17.94■□□□□ 0.46
LINC02139-201ENST00000612023 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
LINC02139-201ENST00000612023 MRC2Q9UBG0 1479 aa17.91■□□□□ 0.46
LINC02139-201ENST00000612023 WDR62O43379 1518 aa17.9■□□□□ 0.46
LINC02139-201ENST00000612023 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
LINC02139-201ENST00000612023 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
LINC02139-201ENST00000612023 PKD2Q13563 968 aa17.82■□□□□ 0.44
LINC02139-201ENST00000612023 PAXIP1Q6ZW49 1069 aaPredicted RBP17.81■□□□□ 0.44
LINC02139-201ENST00000612023 RIMBP3CA6NJZ7 1639 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms