RNA–Protein interactions for RNA: ENST00000611174.4

CENPE-208, Transcript of centromere protein E, humanhuman

TSL 5 BASIC

Gene CENPE, Length 8,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-208ENST00000611174 SF3B1O75533 1304 aaKnown RBP eCLIP4.76□□□□□ -1.653e-6■■■■■ 58.7
CENPE-208ENST00000611174 QKIQ96PU8 341 aaKnown RBP eCLIP4.73□□□□□ -1.652e-7■■■■■ 40
CENPE-208ENST00000611174 EFTUD2Q15029 972 aaKnown RBP eCLIP4.9□□□□□ -1.621e-10■■■■■ 36.6
CENPE-208ENST00000611174 PTBP1P26599 531 aaKnown RBP eCLIP4.22□□□□□ -1.739e-10■■■■■ 35.2
CENPE-208ENST00000611174 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.59□□□□□ -1.672e-7■■■■■ 29.8
CENPE-208ENST00000611174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.32□□□□□ -1.561e-6■■■■■ 28.5
CENPE-208ENST00000611174 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.62□□□□□ -1.671e-6■■■■■ 27.7
CENPE-208ENST00000611174 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.39□□□□□ -1.558e-6■■■■□ 26.6
CENPE-208ENST00000611174 SF3B4Q15427 424 aaKnown RBP eCLIP4.36□□□□□ -1.711e-6■■■■□ 26.1
CENPE-208ENST00000611174 AQRO60306 1485 aaKnown RBP eCLIP6.03□□□□□ -1.443e-7■■■■□ 25.2
CENPE-208ENST00000611174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.55□□□□□ -1.368e-8■■■■□ 25
CENPE-208ENST00000611174 U2AF2P26368 475 aaKnown RBP eCLIP5.39□□□□□ -1.552e-11■■■■□ 24
CENPE-208ENST00000611174 LARP4Q71RC2 724 aaKnown RBP eCLIP4.55□□□□□ -1.689e-7■■■■□ 23.4
CENPE-208ENST00000611174 PPIGQ13427 754 aaKnown RBP eCLIP4.59□□□□□ -1.672e-6■■■■□ 23.4
CENPE-208ENST00000611174 U2AF1Q01081 240 aaKnown RBP eCLIP6.15□□□□□ -1.423e-8■■■■□ 22.3
CENPE-208ENST00000611174 NOLC1Q14978 699 aaKnown RBP eCLIP5.46□□□□□ -1.536e-6■■■■□ 21.7
CENPE-208ENST00000611174 HLTFQ14527 1009 aaKnown RBP eCLIP5.41□□□□□ -1.548e-6■■■■□ 21.3
CENPE-208ENST00000611174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.17□□□□□ -1.587e-7■■■■□ 21
CENPE-208ENST00000611174 SMNDC1O75940 238 aaKnown RBP eCLIP4.84□□□□□ -1.636e-11■■■■□ 20.7
CENPE-208ENST00000611174 TRA2AQ13595 282 aaKnown RBP eCLIP4.15□□□□□ -1.741e-6■■■■□ 20.2
CENPE-208ENST00000611174 MATR3P43243 847 aaKnown RBP eCLIP5.44□□□□□ -1.542e-6■■■■□ 20.1
CENPE-208ENST00000611174 ZNF622Q969S3 477 aaKnown RBP eCLIP5.47□□□□□ -1.532e-7■■■■□ 19.7
CENPE-208ENST00000611174 YBX3P16989 372 aaKnown RBP eCLIP4.88□□□□□ -1.639e-6■■■□□ 18.6
CENPE-208ENST00000611174 NCBP2P52298 156 aaKnown RBP eCLIP4.58□□□□□ -1.681e-8■■■□□ 16.9
CENPE-208ENST00000611174 ZRANB2O95218 330 aaKnown RBP eCLIP5.11□□□□□ -1.594e-8■■■□□ 16.3
CENPE-208ENST00000611174 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.28□□□□□ -1.721e-6■■■□□ 16.1
CENPE-208ENST00000611174 HNRNPMP52272 730 aaKnown RBP eCLIP6.21□□□□□ -1.411e-6■■■□□ 15.2
CENPE-208ENST00000611174 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.58□□□□□ -1.525e-8■■■□□ 15.1
CENPE-208ENST00000611174 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.92□□□□□ -1.622e-6■■■□□ 15
CENPE-208ENST00000611174 KHSRPQ92945 711 aaKnown RBP eCLIP4.62□□□□□ -1.674e-7■■□□□ 14.3
CENPE-208ENST00000611174 NIPBLQ6KC79 2804 aaeCLIP3.42□□□□□ -1.862e-7■■□□□ 13.3
CENPE-208ENST00000611174 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.33□□□□□ -1.563e-7■■□□□ 12.8
CENPE-208ENST00000611174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.07□□□□□ -1.443e-6■■□□□ 12.4
CENPE-208ENST00000611174 FXR2P51116 673 aaKnown RBP eCLIP5.03□□□□□ -1.65e-8■■□□□ 12.4
CENPE-208ENST00000611174 XRCC6P12956 609 aaKnown RBP eCLIP5.58□□□□□ -1.525e-6■■□□□ 12
CENPE-208ENST00000611174 RBM15Q96T37 977 aaKnown RBP eCLIP5.03□□□□□ -1.67e-7■■□□□ 11.6
CENPE-208ENST00000611174 AARSP49588 968 aaKnown RBP eCLIP4.88□□□□□ -1.633e-6■□□□□ 10.9
CENPE-208ENST00000611174 GPKOWQ92917 476 aaPredicted RBP eCLIP5.33□□□□□ -1.564e-8■□□□□ 10.6
CENPE-208ENST00000611174 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.05□□□□□ -1.62e-6■□□□□ 10.3
CENPE-208ENST00000611174 HNRNPLP14866 589 aaKnown RBP eCLIP4.83□□□□□ -1.642e-6■□□□□ 8.7
CENPE-208ENST00000611174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.76□□□□□ -1.494e-6■□□□□ 8.2
Retrieved 41 of 41 RNA–protein pairs in 15.3 ms