RNA–Protein interactions for RNA: ENST00000611118.1

EP400-206, Transcript of E1A binding protein p400, humanhuman

TSL 2

Gene EP400, Length 2,403 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-206ENST00000611118 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
EP400-206ENST00000611118 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
EP400-206ENST00000611118 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
EP400-206ENST00000611118 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
EP400-206ENST00000611118 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
EP400-206ENST00000611118 ABCC9O60706 1549 aa22.74■■□□□ 1.23
EP400-206ENST00000611118 DCAF1Q9Y4B6 1507 aa22.63■■□□□ 1.21
EP400-206ENST00000611118 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
EP400-206ENST00000611118 NACADO15069 1562 aa22.23■■□□□ 1.15
EP400-206ENST00000611118 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
EP400-206ENST00000611118 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
EP400-206ENST00000611118 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
EP400-206ENST00000611118 UNC13AQ9UPW8 1703 aa21.71■■□□□ 1.07
EP400-206ENST00000611118 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
EP400-206ENST00000611118 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
EP400-206ENST00000611118 HRCP23327 699 aa21.48■■□□□ 1.03
EP400-206ENST00000611118 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.02
EP400-206ENST00000611118 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
EP400-206ENST00000611118 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
EP400-206ENST00000611118 CHIC1Q5VXU3 224 aa21.28■■□□□ 1
EP400-206ENST00000611118 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
EP400-206ENST00000611118 BAZ1AQ9NRL2 1556 aaPredicted RBP21.23■□□□□ 0.99
EP400-206ENST00000611118 WIZO95785 1651 aa21.19■□□□□ 0.98
EP400-206ENST00000611118 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
EP400-206ENST00000611118 TOP2AP11388 1531 aaKnown RBP20.87■□□□□ 0.93
EP400-206ENST00000611118 PPARGC1BQ86YN6 1023 aaKnown RBP20.84■□□□□ 0.93
EP400-206ENST00000611118 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
EP400-206ENST00000611118 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
EP400-206ENST00000611118 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
EP400-206ENST00000611118 LOC105371045A0A1W2PR82 267 aa20.78■□□□□ 0.92
EP400-206ENST00000611118 PCGF6Q9BYE7 350 aa20.78■□□□□ 0.92
EP400-206ENST00000611118 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
EP400-206ENST00000611118 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
EP400-206ENST00000611118 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
EP400-206ENST00000611118 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
EP400-206ENST00000611118 MYT1Q01538 1121 aa20.59■□□□□ 0.89
EP400-206ENST00000611118 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
EP400-206ENST00000611118 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
EP400-206ENST00000611118 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
EP400-206ENST00000611118 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
EP400-206ENST00000611118 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.87
EP400-206ENST00000611118 HMGXB3Q12766 1538 aa20.51■□□□□ 0.87
EP400-206ENST00000611118 SCAF1Q9H7N4 1312 aaKnown RBP20.4■□□□□ 0.86
EP400-206ENST00000611118 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
EP400-206ENST00000611118 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
EP400-206ENST00000611118 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
EP400-206ENST00000611118 WRNQ14191 1432 aaPredicted RBP eCLIP20.17■□□□□ 0.82
EP400-206ENST00000611118 CFTRP13569 1480 aa20.14■□□□□ 0.82
EP400-206ENST00000611118 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
EP400-206ENST00000611118 CADPSQ9ULU8 1353 aa20.08■□□□□ 0.8
EP400-206ENST00000611118 SOGA1O94964 1423 aa20.02■□□□□ 0.79
EP400-206ENST00000611118 PRDM2Q13029 1718 aa20■□□□□ 0.79
EP400-206ENST00000611118 NESP48681 1621 aa20■□□□□ 0.79
EP400-206ENST00000611118 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
EP400-206ENST00000611118 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
EP400-206ENST00000611118 CUX1P39880 1505 aa19.93■□□□□ 0.78
EP400-206ENST00000611118 BIVM-ERCC5R4GMW8 1640 aa19.9■□□□□ 0.78
EP400-206ENST00000611118 FANCD2Q9BXW9 1451 aa19.89■□□□□ 0.77
EP400-206ENST00000611118 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
EP400-206ENST00000611118 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
EP400-206ENST00000611118 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
EP400-206ENST00000611118 EEA1Q15075 1411 aa19.8■□□□□ 0.76
EP400-206ENST00000611118 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
EP400-206ENST00000611118 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
EP400-206ENST00000611118 TTBK1Q5TCY1 1321 aaPredicted RBP19.72■□□□□ 0.75
EP400-206ENST00000611118 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
EP400-206ENST00000611118 PDS5BQ9NTI5 1447 aa19.71■□□□□ 0.75
EP400-206ENST00000611118 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
EP400-206ENST00000611118 UBTFP17480 764 aaKnown RBP19.67■□□□□ 0.74
EP400-206ENST00000611118 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
EP400-206ENST00000611118 DNMBPQ6XZF7 1577 aa19.67■□□□□ 0.74
EP400-206ENST00000611118 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
EP400-206ENST00000611118 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.74
EP400-206ENST00000611118 CENPBP07199 599 aaPredicted RBP19.63■□□□□ 0.73
EP400-206ENST00000611118 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
EP400-206ENST00000611118 KIF27Q86VH2 1401 aa19.62■□□□□ 0.73
EP400-206ENST00000611118 CUX2O14529 1486 aa19.62■□□□□ 0.73
EP400-206ENST00000611118 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
EP400-206ENST00000611118 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
EP400-206ENST00000611118 KIF21BO75037 1637 aa19.59■□□□□ 0.73
EP400-206ENST00000611118 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.73
EP400-206ENST00000611118 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
EP400-206ENST00000611118 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
EP400-206ENST00000611118 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
EP400-206ENST00000611118 ERCC6Q03468 1493 aa19.51■□□□□ 0.71
EP400-206ENST00000611118 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
EP400-206ENST00000611118 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
EP400-206ENST00000611118 IGF1RP08069 1367 aa19.46■□□□□ 0.71
EP400-206ENST00000611118 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
EP400-206ENST00000611118 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
EP400-206ENST00000611118 ERICH3Q5RHP9 1530 aa19.43■□□□□ 0.7
EP400-206ENST00000611118 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
EP400-206ENST00000611118 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
EP400-206ENST00000611118 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
EP400-206ENST00000611118 DIEXFQ68CQ4 756 aaKnown RBP19.36■□□□□ 0.69
EP400-206ENST00000611118 CLIP1P30622 1438 aa19.35■□□□□ 0.69
EP400-206ENST00000611118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
EP400-206ENST00000611118 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
EP400-206ENST00000611118 WDR62O43379 1518 aa19.34■□□□□ 0.69
EP400-206ENST00000611118 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms