RNA–Protein interactions for RNA: ENST00000610851.1

MALAT1-205, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-205ENST00000610851 SF3B4Q15427 424 aaKnown RBP eCLIP4.62□□□□□ -1.67not detected■■■■■ 57.3
MALAT1-205ENST00000610851 SMNDC1O75940 238 aaKnown RBP eCLIP8.42□□□□□ -1.06not detected■■■■■ 41.9
MALAT1-205ENST00000610851 TARDBPQ13148 414 aaKnown RBP eCLIP6.02□□□□□ -1.45not detected■■■■■ 30.6
MALAT1-205ENST00000610851 U2AF2P26368 475 aaKnown RBP eCLIP4.42□□□□□ -1.7not detected■■■■■ 27.7
MALAT1-205ENST00000610851 TIA1P31483 386 aaKnown RBP eCLIP4.88□□□□□ -1.63not detected■■■■■ 27.4
MALAT1-205ENST00000610851 TIAL1Q01085 375 aaKnown RBP eCLIP5.45□□□□□ -1.54not detected■■■■□ 19.6
MALAT1-205ENST00000610851 U2AF1Q01081 240 aaKnown RBP eCLIP6.28□□□□□ -1.4not detected■■■□□ 14.7
MALAT1-205ENST00000610851 HNRNPA1P09651 372 aaKnown RBP eCLIP5.5□□□□□ -1.53not detected■■□□□ 13.1
MALAT1-205ENST00000610851 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.53not detected■□□□□ 11.3
MALAT1-205ENST00000610851 QKIQ96PU8 341 aaKnown RBP eCLIP3.66□□□□□ -1.82not detected■□□□□ 11.2
MALAT1-205ENST00000610851 SRSF1Q07955 248 aaKnown RBP eCLIP5.11□□□□□ -1.59not detected■□□□□ 11
MALAT1-205ENST00000610851 SRSF7Q16629 238 aaKnown RBP eCLIP5.36□□□□□ -1.55not detected■□□□□ 10.9
MALAT1-205ENST00000610851 ZRANB2O95218 330 aaKnown RBP eCLIP6.02□□□□□ -1.45not detected■□□□□ 9.7
MALAT1-205ENST00000610851 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.49□□□□□ -1.53not detected■□□□□ 9.4
MALAT1-205ENST00000610851 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.89□□□□□ -1.31not detected■□□□□ 9.2
MALAT1-205ENST00000610851 DDX42Q86XP3 938 aaKnown RBP eCLIP6.41□□□□□ -1.38not detected■□□□□ 8.4
MALAT1-205ENST00000610851 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87not detected■□□□□ 8.4
Retrieved 17 of 17 RNA–protein pairs in 5.8 ms