RNA–Protein interactions for RNA: ENST00000609439.2

GTF2IP13-202, Transcript of general transcription factor IIi pseudogene 13, humanhuman

TSL 5 BASIC

Gene GTF2IP13, Length 10,247 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP13-202ENST00000609439 DCAF8L2P0C7V8 631 aa19.56■□□□□ 0.72
GTF2IP13-202ENST00000609439 PELP1Q8IZL8 1130 aaKnown RBP19.43■□□□□ 0.7
GTF2IP13-202ENST00000609439 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
GTF2IP13-202ENST00000609439 MYT1Q01538 1121 aa18.55■□□□□ 0.56
GTF2IP13-202ENST00000609439 CCER1Q8TC90 406 aaPredicted RBP18.49■□□□□ 0.55
GTF2IP13-202ENST00000609439 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
GTF2IP13-202ENST00000609439 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
GTF2IP13-202ENST00000609439 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
GTF2IP13-202ENST00000609439 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
GTF2IP13-202ENST00000609439 APLP2Q06481 763 aa17.98■□□□□ 0.47
GTF2IP13-202ENST00000609439 DAXXQ9UER7 740 aaPredicted RBP17.85■□□□□ 0.45
GTF2IP13-202ENST00000609439 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.45
GTF2IP13-202ENST00000609439 NEFLP07196 543 aa17.83■□□□□ 0.44
GTF2IP13-202ENST00000609439 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
GTF2IP13-202ENST00000609439 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
GTF2IP13-202ENST00000609439 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
GTF2IP13-202ENST00000609439 PCGF6Q9BYE7 350 aa17.46■□□□□ 0.39
GTF2IP13-202ENST00000609439 ZNF316A6NFI3 1004 aaPredicted RBP17.37■□□□□ 0.37
GTF2IP13-202ENST00000609439 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
GTF2IP13-202ENST00000609439 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
GTF2IP13-202ENST00000609439 RTL5Q5HYW3 569 aaPredicted RBP17.26■□□□□ 0.35
GTF2IP13-202ENST00000609439 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
GTF2IP13-202ENST00000609439 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
GTF2IP13-202ENST00000609439 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
GTF2IP13-202ENST00000609439 SLC4A1APQ9BWU0 796 aaKnown RBP17■□□□□ 0.31
GTF2IP13-202ENST00000609439 CNGB1Q14028 1251 aaPredicted RBP16.98■□□□□ 0.31
GTF2IP13-202ENST00000609439 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
GTF2IP13-202ENST00000609439 CHIC1Q5VXU3 224 aa16.96■□□□□ 0.31
GTF2IP13-202ENST00000609439 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
GTF2IP13-202ENST00000609439 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
GTF2IP13-202ENST00000609439 BCL11AQ9H165 835 aa16.76■□□□□ 0.27
GTF2IP13-202ENST00000609439 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
GTF2IP13-202ENST00000609439 EIF5BO60841 1220 aaKnown RBP16.68■□□□□ 0.26
GTF2IP13-202ENST00000609439 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
GTF2IP13-202ENST00000609439 PPARGC1BQ86YN6 1023 aaKnown RBP16.6■□□□□ 0.25
GTF2IP13-202ENST00000609439 GLIPR1L2Q4G1C9 344 aa16.56■□□□□ 0.24
GTF2IP13-202ENST00000609439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
GTF2IP13-202ENST00000609439 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
GTF2IP13-202ENST00000609439 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
GTF2IP13-202ENST00000609439 ITGAEP38570 1179 aa16.48■□□□□ 0.23
GTF2IP13-202ENST00000609439 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
GTF2IP13-202ENST00000609439 CDK11BP21127 795 aaKnown RBP16.41■□□□□ 0.22
GTF2IP13-202ENST00000609439 CDK11AQ9UQ88 783 aaPredicted RBP16.41■□□□□ 0.22
GTF2IP13-202ENST00000609439 BCANQ96GW7 911 aa16.4■□□□□ 0.22
GTF2IP13-202ENST00000609439 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
GTF2IP13-202ENST00000609439 NPM2Q86SE8 214 aaKnown RBP16.24■□□□□ 0.19
GTF2IP13-202ENST00000609439 ANP32AP39687 249 aaKnown RBP16.22■□□□□ 0.19
GTF2IP13-202ENST00000609439 HRCP23327 699 aa16.19■□□□□ 0.18
GTF2IP13-202ENST00000609439 ARXQ96QS3 562 aa16.18■□□□□ 0.18
GTF2IP13-202ENST00000609439 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
GTF2IP13-202ENST00000609439 NEFMP07197 916 aa16.12■□□□□ 0.17
GTF2IP13-202ENST00000609439 ABCC9O60706 1549 aa16.09■□□□□ 0.17
GTF2IP13-202ENST00000609439 TULP1O00294 542 aaPredicted RBP16.04■□□□□ 0.16
GTF2IP13-202ENST00000609439 LOC105371045A0A1W2PR82 267 aa16.04■□□□□ 0.16
GTF2IP13-202ENST00000609439 TNNT2P45379 298 aaPredicted RBP16.03■□□□□ 0.16
GTF2IP13-202ENST00000609439 ZNF326Q5BKZ1 582 aaKnown RBP16.03■□□□□ 0.16
GTF2IP13-202ENST00000609439 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
GTF2IP13-202ENST00000609439 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
GTF2IP13-202ENST00000609439 FAM50AQ14320 339 aaKnown RBP15.99■□□□□ 0.15
GTF2IP13-202ENST00000609439 UPF2Q9HAU5 1272 aaKnown RBP15.94■□□□□ 0.14
GTF2IP13-202ENST00000609439 DIEXFQ68CQ4 756 aaKnown RBP15.94■□□□□ 0.14
GTF2IP13-202ENST00000609439 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
GTF2IP13-202ENST00000609439 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
GTF2IP13-202ENST00000609439 NBR1Q14596 966 aa15.9■□□□□ 0.14
GTF2IP13-202ENST00000609439 ANP32CO43423 234 aa15.89■□□□□ 0.13
GTF2IP13-202ENST00000609439 FBLN2P98095 1184 aa15.89■□□□□ 0.13
GTF2IP13-202ENST00000609439 NEUROD1Q13562 356 aa15.86■□□□□ 0.13
GTF2IP13-202ENST00000609439 GTF3C3Q9Y5Q9 886 aa15.85■□□□□ 0.13
GTF2IP13-202ENST00000609439 A0A0G2JS52 829 aa15.81■□□□□ 0.12
GTF2IP13-202ENST00000609439 TRIM44Q96DX7 344 aaPredicted RBP15.79■□□□□ 0.12
GTF2IP13-202ENST00000609439 SCRIBQ14160 1630 aa15.72■□□□□ 0.11
GTF2IP13-202ENST00000609439 PTMAP06454 111 aaKnown RBP15.71■□□□□ 0.11
GTF2IP13-202ENST00000609439 TPRNQ4KMQ1 711 aa15.71■□□□□ 0.1
GTF2IP13-202ENST00000609439 ZRSR1Q15695 479 aaKnown RBP15.7■□□□□ 0.1
GTF2IP13-202ENST00000609439 DNTTIP2Q5QJE6 756 aaKnown RBP15.7■□□□□ 0.1
GTF2IP13-202ENST00000609439 ARID3CA6NKF2 412 aa15.7■□□□□ 0.1
GTF2IP13-202ENST00000609439 CLSTN1O94985 981 aa15.69■□□□□ 0.1
GTF2IP13-202ENST00000609439 NCLP19338 710 aaKnown RBP15.69■□□□□ 0.1
GTF2IP13-202ENST00000609439 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
GTF2IP13-202ENST00000609439 PRM3Q9NNZ6 103 aa15.66■□□□□ 0.1
GTF2IP13-202ENST00000609439 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
GTF2IP13-202ENST00000609439 NAP1L5Q96NT1 182 aaPredicted RBP15.59■□□□□ 0.09
GTF2IP13-202ENST00000609439 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.08
GTF2IP13-202ENST00000609439 P3H3Q8IVL6 736 aa15.57■□□□□ 0.08
GTF2IP13-202ENST00000609439 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
GTF2IP13-202ENST00000609439 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.08
GTF2IP13-202ENST00000609439 ZNF777Q9ULD5 760 aaPredicted RBP15.52■□□□□ 0.08
GTF2IP13-202ENST00000609439 GOLGA6L6A8MZA4 724 aa15.51■□□□□ 0.07
GTF2IP13-202ENST00000609439 GOLGA6L22H0YM25 854 aa15.5■□□□□ 0.07
GTF2IP13-202ENST00000609439 ESF1Q9H501 851 aaKnown RBP15.49■□□□□ 0.07
GTF2IP13-202ENST00000609439 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
GTF2IP13-202ENST00000609439 FKBP8Q14318 412 aa15.46■□□□□ 0.07
GTF2IP13-202ENST00000609439 NOC3LQ8WTT2 800 aaKnown RBP15.46■□□□□ 0.07
GTF2IP13-202ENST00000609439 ZBTB7CA1YPR0 619 aa15.44■□□□□ 0.06
GTF2IP13-202ENST00000609439 CALRP27797 417 aaKnown RBP15.43■□□□□ 0.06
GTF2IP13-202ENST00000609439 SALL2Q9Y467 1007 aaPredicted RBP15.43■□□□□ 0.06
GTF2IP13-202ENST00000609439 PLEKHG5O94827 1062 aa15.43■□□□□ 0.06
GTF2IP13-202ENST00000609439 BECN1Q14457 450 aa15.43■□□□□ 0.06
GTF2IP13-202ENST00000609439 PLCB2Q00722 1185 aa15.42■□□□□ 0.06
GTF2IP13-202ENST00000609439 CCDC136Q96JN2 1154 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms