RNA–Protein interactions for RNA: ENST00000609038.1

AP000553.2-201, humanhuman

BASIC

Gene AP000553.2, Length 441 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.2-201ENST00000609038 NISCHQ9Y2I1 1504 aa31.76■■■□□ 2.68
AP000553.2-201ENST00000609038 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
AP000553.2-201ENST00000609038 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
AP000553.2-201ENST00000609038 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
AP000553.2-201ENST00000609038 ABCC9O60706 1549 aa26.69■■□□□ 1.86
AP000553.2-201ENST00000609038 ZCCHC6Q5VYS8 1495 aaKnown RBP26.6■■□□□ 1.85
AP000553.2-201ENST00000609038 DCAF1Q9Y4B6 1507 aa26.44■■□□□ 1.82
AP000553.2-201ENST00000609038 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
AP000553.2-201ENST00000609038 NACADO15069 1562 aa26.25■■□□□ 1.79
AP000553.2-201ENST00000609038 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
AP000553.2-201ENST00000609038 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
AP000553.2-201ENST00000609038 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
AP000553.2-201ENST00000609038 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
AP000553.2-201ENST00000609038 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
AP000553.2-201ENST00000609038 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
AP000553.2-201ENST00000609038 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
AP000553.2-201ENST00000609038 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
AP000553.2-201ENST00000609038 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
AP000553.2-201ENST00000609038 BAZ1AQ9NRL2 1556 aaPredicted RBP24.6■■□□□ 1.53
AP000553.2-201ENST00000609038 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
AP000553.2-201ENST00000609038 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
AP000553.2-201ENST00000609038 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
AP000553.2-201ENST00000609038 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
AP000553.2-201ENST00000609038 PEG3Q9GZU2 1588 aa24.39■■□□□ 1.5
AP000553.2-201ENST00000609038 RSF1Q96T23 1441 aaPredicted RBP24.36■■□□□ 1.49
AP000553.2-201ENST00000609038 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
AP000553.2-201ENST00000609038 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
AP000553.2-201ENST00000609038 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
AP000553.2-201ENST00000609038 WIZO95785 1651 aa24.19■■□□□ 1.46
AP000553.2-201ENST00000609038 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
AP000553.2-201ENST00000609038 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
AP000553.2-201ENST00000609038 TOP2AP11388 1531 aaKnown RBP24.04■■□□□ 1.44
AP000553.2-201ENST00000609038 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
AP000553.2-201ENST00000609038 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
AP000553.2-201ENST00000609038 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
AP000553.2-201ENST00000609038 FOXD1Q16676 465 aa23.92■■□□□ 1.42
AP000553.2-201ENST00000609038 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
AP000553.2-201ENST00000609038 CFTRP13569 1480 aa23.47■■□□□ 1.35
AP000553.2-201ENST00000609038 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
AP000553.2-201ENST00000609038 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
AP000553.2-201ENST00000609038 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
AP000553.2-201ENST00000609038 NESP48681 1621 aa23.27■■□□□ 1.32
AP000553.2-201ENST00000609038 PDS5BQ9NTI5 1447 aa23.24■■□□□ 1.31
AP000553.2-201ENST00000609038 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
AP000553.2-201ENST00000609038 KIF21AQ7Z4S6 1674 aa23.12■■□□□ 1.29
AP000553.2-201ENST00000609038 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
AP000553.2-201ENST00000609038 ABCC8Q09428 1581 aa23■■□□□ 1.27
AP000553.2-201ENST00000609038 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
AP000553.2-201ENST00000609038 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
AP000553.2-201ENST00000609038 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
AP000553.2-201ENST00000609038 THOC2Q8NI27 1593 aaKnown RBP22.94■■□□□ 1.26
AP000553.2-201ENST00000609038 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
AP000553.2-201ENST00000609038 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
AP000553.2-201ENST00000609038 POTEDQ86YR6 584 aa22.93■■□□□ 1.26
AP000553.2-201ENST00000609038 WDR62O43379 1518 aa22.92■■□□□ 1.26
AP000553.2-201ENST00000609038 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
AP000553.2-201ENST00000609038 CUX1P39880 1505 aa22.89■■□□□ 1.26
AP000553.2-201ENST00000609038 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.26
AP000553.2-201ENST00000609038 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
AP000553.2-201ENST00000609038 SYNJ1O43426 1573 aa22.86■■□□□ 1.25
AP000553.2-201ENST00000609038 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
AP000553.2-201ENST00000609038 FGD5Q6ZNL6 1462 aa22.71■■□□□ 1.23
AP000553.2-201ENST00000609038 TRIM41Q8WV44 630 aa22.69■■□□□ 1.22
AP000553.2-201ENST00000609038 CUX2O14529 1486 aa22.68■■□□□ 1.22
AP000553.2-201ENST00000609038 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
AP000553.2-201ENST00000609038 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
AP000553.2-201ENST00000609038 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
AP000553.2-201ENST00000609038 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
AP000553.2-201ENST00000609038 SOGA1O94964 1423 aa22.59■■□□□ 1.21
AP000553.2-201ENST00000609038 MSH5O43196 834 aa22.58■■□□□ 1.21
AP000553.2-201ENST00000609038 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
AP000553.2-201ENST00000609038 EEA1Q15075 1411 aa22.48■■□□□ 1.19
AP000553.2-201ENST00000609038 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
AP000553.2-201ENST00000609038 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
AP000553.2-201ENST00000609038 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
AP000553.2-201ENST00000609038 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
AP000553.2-201ENST00000609038 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
AP000553.2-201ENST00000609038 ERICH3Q5RHP9 1530 aa22.36■■□□□ 1.17
AP000553.2-201ENST00000609038 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
AP000553.2-201ENST00000609038 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
AP000553.2-201ENST00000609038 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
AP000553.2-201ENST00000609038 GRIN2BQ13224 1484 aa22.31■■□□□ 1.16
AP000553.2-201ENST00000609038 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.16
AP000553.2-201ENST00000609038 CUL7Q14999 1698 aa22.28■■□□□ 1.16
AP000553.2-201ENST00000609038 PIAS4Q8N2W9 510 aaPredicted RBP22.27■■□□□ 1.16
AP000553.2-201ENST00000609038 IGF1RP08069 1367 aa22.26■■□□□ 1.15
AP000553.2-201ENST00000609038 MAGI1Q96QZ7 1491 aaPredicted RBP22.23■■□□□ 1.15
AP000553.2-201ENST00000609038 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
AP000553.2-201ENST00000609038 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
AP000553.2-201ENST00000609038 KIF21BO75037 1637 aa22.18■■□□□ 1.14
AP000553.2-201ENST00000609038 ADAMTS12P58397 1594 aa22.18■■□□□ 1.14
AP000553.2-201ENST00000609038 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
AP000553.2-201ENST00000609038 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
AP000553.2-201ENST00000609038 CARMIL1Q5VZK9 1371 aa22.13■■□□□ 1.13
AP000553.2-201ENST00000609038 SYNJ2O15056 1496 aa22.1■■□□□ 1.13
AP000553.2-201ENST00000609038 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
AP000553.2-201ENST00000609038 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
AP000553.2-201ENST00000609038 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
AP000553.2-201ENST00000609038 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
AP000553.2-201ENST00000609038 GRIN2AQ12879 1464 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms