RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
CTCFL-217ENST00000608425 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
CTCFL-217ENST00000608425 PELP1Q8IZL8 1130 aaKnown RBP20.53■□□□□ 0.88
CTCFL-217ENST00000608425 HRCP23327 699 aa20.37■□□□□ 0.85
CTCFL-217ENST00000608425 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
CTCFL-217ENST00000608425 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
CTCFL-217ENST00000608425 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
CTCFL-217ENST00000608425 MYT1Q01538 1121 aa19.83■□□□□ 0.77
CTCFL-217ENST00000608425 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
CTCFL-217ENST00000608425 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
CTCFL-217ENST00000608425 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
CTCFL-217ENST00000608425 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
CTCFL-217ENST00000608425 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
CTCFL-217ENST00000608425 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
CTCFL-217ENST00000608425 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
CTCFL-217ENST00000608425 NACADO15069 1562 aa19■□□□□ 0.63
CTCFL-217ENST00000608425 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
CTCFL-217ENST00000608425 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
CTCFL-217ENST00000608425 ABCC9O60706 1549 aa18.91■□□□□ 0.62
CTCFL-217ENST00000608425 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
CTCFL-217ENST00000608425 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
CTCFL-217ENST00000608425 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
CTCFL-217ENST00000608425 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
CTCFL-217ENST00000608425 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
CTCFL-217ENST00000608425 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
CTCFL-217ENST00000608425 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
CTCFL-217ENST00000608425 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
CTCFL-217ENST00000608425 ZEB1P37275 1124 aaPredicted RBP18.62■□□□□ 0.57
CTCFL-217ENST00000608425 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
CTCFL-217ENST00000608425 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
CTCFL-217ENST00000608425 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
CTCFL-217ENST00000608425 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
CTCFL-217ENST00000608425 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
CTCFL-217ENST00000608425 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
CTCFL-217ENST00000608425 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
CTCFL-217ENST00000608425 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
CTCFL-217ENST00000608425 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
CTCFL-217ENST00000608425 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
CTCFL-217ENST00000608425 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
CTCFL-217ENST00000608425 WIZO95785 1651 aa18.24■□□□□ 0.51
CTCFL-217ENST00000608425 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
CTCFL-217ENST00000608425 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
CTCFL-217ENST00000608425 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
CTCFL-217ENST00000608425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
CTCFL-217ENST00000608425 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
CTCFL-217ENST00000608425 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
CTCFL-217ENST00000608425 TSHZ2Q9NRE2 1034 aa17.97■□□□□ 0.47
CTCFL-217ENST00000608425 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
CTCFL-217ENST00000608425 APLP2Q06481 763 aa17.93■□□□□ 0.46
CTCFL-217ENST00000608425 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
CTCFL-217ENST00000608425 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
CTCFL-217ENST00000608425 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
CTCFL-217ENST00000608425 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
CTCFL-217ENST00000608425 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
CTCFL-217ENST00000608425 MIER1Q8N108 512 aa17.81■□□□□ 0.44
CTCFL-217ENST00000608425 SUPT16HQ9Y5B9 1047 aaKnown RBP17.81■□□□□ 0.44
CTCFL-217ENST00000608425 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.44
CTCFL-217ENST00000608425 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
CTCFL-217ENST00000608425 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
CTCFL-217ENST00000608425 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
CTCFL-217ENST00000608425 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
CTCFL-217ENST00000608425 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
CTCFL-217ENST00000608425 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
CTCFL-217ENST00000608425 BCANQ96GW7 911 aa17.51■□□□□ 0.39
CTCFL-217ENST00000608425 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
CTCFL-217ENST00000608425 EEA1Q15075 1411 aa17.48■□□□□ 0.39
CTCFL-217ENST00000608425 MSH5O43196 834 aa17.48■□□□□ 0.39
CTCFL-217ENST00000608425 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
CTCFL-217ENST00000608425 SALL2Q9Y467 1007 aaPredicted RBP17.47■□□□□ 0.39
CTCFL-217ENST00000608425 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
CTCFL-217ENST00000608425 RBM19Q9Y4C8 960 aaKnown RBP17.45■□□□□ 0.38
CTCFL-217ENST00000608425 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
CTCFL-217ENST00000608425 SOGA1O94964 1423 aa17.36■□□□□ 0.37
CTCFL-217ENST00000608425 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
CTCFL-217ENST00000608425 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
CTCFL-217ENST00000608425 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
CTCFL-217ENST00000608425 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
CTCFL-217ENST00000608425 PRDM2Q13029 1718 aa17.29■□□□□ 0.36
CTCFL-217ENST00000608425 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.35
CTCFL-217ENST00000608425 KIF21BO75037 1637 aa17.26■□□□□ 0.35
CTCFL-217ENST00000608425 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
CTCFL-217ENST00000608425 CFTRP13569 1480 aa17.25■□□□□ 0.35
CTCFL-217ENST00000608425 GOLGA3Q08378 1498 aa17.25■□□□□ 0.35
CTCFL-217ENST00000608425 ITGAEP38570 1179 aa17.24■□□□□ 0.35
CTCFL-217ENST00000608425 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
CTCFL-217ENST00000608425 UBE2Q2Q8WVN8 375 aa17.22■□□□□ 0.35
CTCFL-217ENST00000608425 FKBP8Q14318 412 aa17.21■□□□□ 0.35
CTCFL-217ENST00000608425 CEP162Q5TB80 1403 aa17.2■□□□□ 0.34
CTCFL-217ENST00000608425 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
CTCFL-217ENST00000608425 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
CTCFL-217ENST00000608425 CUX1P39880 1505 aa17.13■□□□□ 0.33
CTCFL-217ENST00000608425 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
CTCFL-217ENST00000608425 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
CTCFL-217ENST00000608425 IL27Q8NEV9 243 aa17.07■□□□□ 0.32
CTCFL-217ENST00000608425 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
CTCFL-217ENST00000608425 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
CTCFL-217ENST00000608425 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
CTCFL-217ENST00000608425 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.31
CTCFL-217ENST00000608425 PRXQ9BXM0 1461 aa17■□□□□ 0.31
CTCFL-217ENST00000608425 NBR1Q14596 966 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms