RNA–Protein interactions for RNA: ENST00000608013.1

AC009237.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC009237.3, Length 3,042 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009237.3-202ENST00000608013 NISCHQ9Y2I1 1504 aa34.47■■■■□ 3.11
AC009237.3-202ENST00000608013 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
AC009237.3-202ENST00000608013 DCAF8L2P0C7V8 631 aa28.97■■■□□ 2.23
AC009237.3-202ENST00000608013 ABCC9O60706 1549 aa28.96■■■□□ 2.23
AC009237.3-202ENST00000608013 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
AC009237.3-202ENST00000608013 SHROOM4Q9ULL8 1493 aa28.39■■■□□ 2.14
AC009237.3-202ENST00000608013 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
AC009237.3-202ENST00000608013 NACADO15069 1562 aa28.08■■■□□ 2.09
AC009237.3-202ENST00000608013 MYO15BQ96JP2 1530 aa28.05■■■□□ 2.08
AC009237.3-202ENST00000608013 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
AC009237.3-202ENST00000608013 SCRIBQ14160 1630 aa27.83■■■□□ 2.04
AC009237.3-202ENST00000608013 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
AC009237.3-202ENST00000608013 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
AC009237.3-202ENST00000608013 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
AC009237.3-202ENST00000608013 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
AC009237.3-202ENST00000608013 CECR2Q9BXF3 1484 aa26.94■■□□□ 1.9
AC009237.3-202ENST00000608013 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
AC009237.3-202ENST00000608013 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.87
AC009237.3-202ENST00000608013 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.86
AC009237.3-202ENST00000608013 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
AC009237.3-202ENST00000608013 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
AC009237.3-202ENST00000608013 WIZO95785 1651 aa26.48■■□□□ 1.83
AC009237.3-202ENST00000608013 EIF4G1Q04637 1599 aaKnown RBP26.38■■□□□ 1.81
AC009237.3-202ENST00000608013 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
AC009237.3-202ENST00000608013 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
AC009237.3-202ENST00000608013 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
AC009237.3-202ENST00000608013 CC2D2AQ9P2K1 1620 aa26.09■■□□□ 1.77
AC009237.3-202ENST00000608013 BAZ1BQ9UIG0 1483 aaKnown RBP26.07■■□□□ 1.76
AC009237.3-202ENST00000608013 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
AC009237.3-202ENST00000608013 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
AC009237.3-202ENST00000608013 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
AC009237.3-202ENST00000608013 CCDC88BA6NC98 1476 aa25.91■■□□□ 1.74
AC009237.3-202ENST00000608013 DNAJC5BQ9UF47 199 aa25.9■■□□□ 1.74
AC009237.3-202ENST00000608013 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
AC009237.3-202ENST00000608013 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
AC009237.3-202ENST00000608013 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
AC009237.3-202ENST00000608013 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
AC009237.3-202ENST00000608013 HRCP23327 699 aa25.61■■□□□ 1.69
AC009237.3-202ENST00000608013 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
AC009237.3-202ENST00000608013 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
AC009237.3-202ENST00000608013 ABCC8Q09428 1581 aa25.36■■□□□ 1.65
AC009237.3-202ENST00000608013 CFTRP13569 1480 aa25.35■■□□□ 1.65
AC009237.3-202ENST00000608013 NESP48681 1621 aa25.35■■□□□ 1.65
AC009237.3-202ENST00000608013 TRIM26Q12899 539 aaPredicted RBP25.31■■□□□ 1.64
AC009237.3-202ENST00000608013 PPARGC1BQ86YN6 1023 aaKnown RBP25.21■■□□□ 1.63
AC009237.3-202ENST00000608013 WRNQ14191 1432 aaPredicted RBP eCLIP25.15■■□□□ 1.62
AC009237.3-202ENST00000608013 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
AC009237.3-202ENST00000608013 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
AC009237.3-202ENST00000608013 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
AC009237.3-202ENST00000608013 SYNJ1O43426 1573 aa25.04■■□□□ 1.6
AC009237.3-202ENST00000608013 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
AC009237.3-202ENST00000608013 CUX1P39880 1505 aa24.96■■□□□ 1.59
AC009237.3-202ENST00000608013 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
AC009237.3-202ENST00000608013 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
AC009237.3-202ENST00000608013 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
AC009237.3-202ENST00000608013 SOGA1O94964 1423 aa24.84■■□□□ 1.57
AC009237.3-202ENST00000608013 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
AC009237.3-202ENST00000608013 BIVM-ERCC5R4GMW8 1640 aa24.81■■□□□ 1.56
AC009237.3-202ENST00000608013 URB2Q14146 1524 aaKnown RBP24.8■■□□□ 1.56
AC009237.3-202ENST00000608013 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
AC009237.3-202ENST00000608013 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
AC009237.3-202ENST00000608013 FGD5Q6ZNL6 1462 aa24.74■■□□□ 1.55
AC009237.3-202ENST00000608013 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
AC009237.3-202ENST00000608013 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
AC009237.3-202ENST00000608013 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
AC009237.3-202ENST00000608013 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
AC009237.3-202ENST00000608013 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
AC009237.3-202ENST00000608013 RAD54L2Q9Y4B4 1467 aa24.66■■□□□ 1.54
AC009237.3-202ENST00000608013 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
AC009237.3-202ENST00000608013 ZEB1P37275 1124 aaPredicted RBP24.65■■□□□ 1.54
AC009237.3-202ENST00000608013 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
AC009237.3-202ENST00000608013 CUX2O14529 1486 aa24.57■■□□□ 1.52
AC009237.3-202ENST00000608013 EEA1Q15075 1411 aa24.56■■□□□ 1.52
AC009237.3-202ENST00000608013 TNIKQ9UKE5 1360 aa24.52■■□□□ 1.52
AC009237.3-202ENST00000608013 KIF27Q86VH2 1401 aa24.51■■□□□ 1.51
AC009237.3-202ENST00000608013 WDR62O43379 1518 aa24.51■■□□□ 1.51
AC009237.3-202ENST00000608013 THOC2Q8NI27 1593 aaKnown RBP24.51■■□□□ 1.51
AC009237.3-202ENST00000608013 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
AC009237.3-202ENST00000608013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
AC009237.3-202ENST00000608013 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
AC009237.3-202ENST00000608013 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
AC009237.3-202ENST00000608013 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
AC009237.3-202ENST00000608013 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
AC009237.3-202ENST00000608013 IGF1RP08069 1367 aa24.37■■□□□ 1.49
AC009237.3-202ENST00000608013 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
AC009237.3-202ENST00000608013 AQRO60306 1485 aaKnown RBP eCLIP24.36■■□□□ 1.49
AC009237.3-202ENST00000608013 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
AC009237.3-202ENST00000608013 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
AC009237.3-202ENST00000608013 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
AC009237.3-202ENST00000608013 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
AC009237.3-202ENST00000608013 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
AC009237.3-202ENST00000608013 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
AC009237.3-202ENST00000608013 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
AC009237.3-202ENST00000608013 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
AC009237.3-202ENST00000608013 KIF21BO75037 1637 aa24.21■■□□□ 1.47
AC009237.3-202ENST00000608013 CLIP1P30622 1438 aa24.21■■□□□ 1.47
AC009237.3-202ENST00000608013 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.45
AC009237.3-202ENST00000608013 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
AC009237.3-202ENST00000608013 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
AC009237.3-202ENST00000608013 APLP2Q06481 763 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms