RNA–Protein interactions for RNA: ENST00000607160.2

RN7SL778P-201, Transcript of RNA, 7SL, cytoplasmic 778, pseudogene, humanhuman

BASIC

Gene RN7SL778P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL778P-201ENST00000607160 NISCHQ9Y2I1 1504 aa18.03■□□□□ 0.48
RN7SL778P-201ENST00000607160 CCDC180Q9P1Z9 1646 aa16.1■□□□□ 0.17
RN7SL778P-201ENST00000607160 ABCC9O60706 1549 aa15.78■□□□□ 0.12
RN7SL778P-201ENST00000607160 RB1CC1Q8TDY2 1594 aa15.17■□□□□ 0.02
RN7SL778P-201ENST00000607160 NACADO15069 1562 aa15.13■□□□□ 0.01
RN7SL778P-201ENST00000607160 DCAF8L2P0C7V8 631 aa15.06■□□□□ 0
RN7SL778P-201ENST00000607160 ZCCHC6Q5VYS8 1495 aaKnown RBP15.02■□□□□ -0
RN7SL778P-201ENST00000607160 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
RN7SL778P-201ENST00000607160 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
RN7SL778P-201ENST00000607160 UNC13AQ9UPW8 1703 aa14.85□□□□□ -0.03
RN7SL778P-201ENST00000607160 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
RN7SL778P-201ENST00000607160 BICRAQ9NZM4 1560 aa14.7□□□□□ -0.06
RN7SL778P-201ENST00000607160 SCRIBQ14160 1630 aa14.67□□□□□ -0.06
RN7SL778P-201ENST00000607160 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
RN7SL778P-201ENST00000607160 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
RN7SL778P-201ENST00000607160 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.12
RN7SL778P-201ENST00000607160 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
RN7SL778P-201ENST00000607160 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
RN7SL778P-201ENST00000607160 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
RN7SL778P-201ENST00000607160 BAZ1AQ9NRL2 1556 aaPredicted RBP13.99□□□□□ -0.17
RN7SL778P-201ENST00000607160 NCAPD3P42695 1498 aa13.94□□□□□ -0.18
RN7SL778P-201ENST00000607160 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
RN7SL778P-201ENST00000607160 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
RN7SL778P-201ENST00000607160 MROH2BQ7Z745 1585 aa13.9□□□□□ -0.18
RN7SL778P-201ENST00000607160 HMGXB3Q12766 1538 aa13.9□□□□□ -0.19
RN7SL778P-201ENST00000607160 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
RN7SL778P-201ENST00000607160 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
RN7SL778P-201ENST00000607160 WIZO95785 1651 aa13.76□□□□□ -0.21
RN7SL778P-201ENST00000607160 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
RN7SL778P-201ENST00000607160 NESP48681 1621 aa13.64□□□□□ -0.23
RN7SL778P-201ENST00000607160 ERCC6Q03468 1493 aa13.62□□□□□ -0.23
RN7SL778P-201ENST00000607160 TOP2AP11388 1531 aaKnown RBP13.61□□□□□ -0.23
RN7SL778P-201ENST00000607160 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
RN7SL778P-201ENST00000607160 CADPSQ9ULU8 1353 aa13.53□□□□□ -0.24
RN7SL778P-201ENST00000607160 KIF21AQ7Z4S6 1674 aa13.51□□□□□ -0.25
RN7SL778P-201ENST00000607160 CUX2O14529 1486 aa13.5□□□□□ -0.25
RN7SL778P-201ENST00000607160 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
RN7SL778P-201ENST00000607160 THOC2Q8NI27 1593 aaKnown RBP13.48□□□□□ -0.25
RN7SL778P-201ENST00000607160 CFTRP13569 1480 aa13.44□□□□□ -0.26
RN7SL778P-201ENST00000607160 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
RN7SL778P-201ENST00000607160 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
RN7SL778P-201ENST00000607160 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
RN7SL778P-201ENST00000607160 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
RN7SL778P-201ENST00000607160 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
RN7SL778P-201ENST00000607160 WDR62O43379 1518 aa13.35□□□□□ -0.27
RN7SL778P-201ENST00000607160 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
RN7SL778P-201ENST00000607160 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
RN7SL778P-201ENST00000607160 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
RN7SL778P-201ENST00000607160 ABCC8Q09428 1581 aa13.16□□□□□ -0.3
RN7SL778P-201ENST00000607160 DNMBPQ6XZF7 1577 aa13.16□□□□□ -0.3
RN7SL778P-201ENST00000607160 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
RN7SL778P-201ENST00000607160 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
RN7SL778P-201ENST00000607160 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
RN7SL778P-201ENST00000607160 ZNF608Q9ULD9 1512 aaPredicted RBP13.05□□□□□ -0.32
RN7SL778P-201ENST00000607160 CUX1P39880 1505 aa13.04□□□□□ -0.32
RN7SL778P-201ENST00000607160 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
RN7SL778P-201ENST00000607160 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
RN7SL778P-201ENST00000607160 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
RN7SL778P-201ENST00000607160 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
RN7SL778P-201ENST00000607160 SOGA1O94964 1423 aa12.98□□□□□ -0.33
RN7SL778P-201ENST00000607160 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.34
RN7SL778P-201ENST00000607160 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
RN7SL778P-201ENST00000607160 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
RN7SL778P-201ENST00000607160 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
RN7SL778P-201ENST00000607160 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
RN7SL778P-201ENST00000607160 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
RN7SL778P-201ENST00000607160 TDRD9Q8NDG6 1382 aaKnown RBP12.92□□□□□ -0.34
RN7SL778P-201ENST00000607160 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
RN7SL778P-201ENST00000607160 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
RN7SL778P-201ENST00000607160 CHD1O14646 1710 aa12.88□□□□□ -0.35
RN7SL778P-201ENST00000607160 ABCA5Q8WWZ7 1642 aa12.86□□□□□ -0.35
RN7SL778P-201ENST00000607160 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
RN7SL778P-201ENST00000607160 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
RN7SL778P-201ENST00000607160 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
RN7SL778P-201ENST00000607160 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
RN7SL778P-201ENST00000607160 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
RN7SL778P-201ENST00000607160 FBLN2P98095 1184 aa12.8□□□□□ -0.36
RN7SL778P-201ENST00000607160 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
RN7SL778P-201ENST00000607160 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
RN7SL778P-201ENST00000607160 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
RN7SL778P-201ENST00000607160 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
RN7SL778P-201ENST00000607160 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
RN7SL778P-201ENST00000607160 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
RN7SL778P-201ENST00000607160 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
RN7SL778P-201ENST00000607160 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
RN7SL778P-201ENST00000607160 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
RN7SL778P-201ENST00000607160 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
RN7SL778P-201ENST00000607160 GRIN2AQ12879 1464 aa12.69□□□□□ -0.38
RN7SL778P-201ENST00000607160 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
RN7SL778P-201ENST00000607160 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
RN7SL778P-201ENST00000607160 CEP170Q5SW79 1584 aa12.64□□□□□ -0.39
RN7SL778P-201ENST00000607160 NUP160Q12769 1436 aa12.63□□□□□ -0.39
RN7SL778P-201ENST00000607160 CUL7Q14999 1698 aa12.62□□□□□ -0.39
RN7SL778P-201ENST00000607160 ARAP1Q96P48 1450 aa12.61□□□□□ -0.39
RN7SL778P-201ENST00000607160 IGF1RP08069 1367 aa12.6□□□□□ -0.39
RN7SL778P-201ENST00000607160 CYB5RLQ6IPT4 315 aa12.57□□□□□ -0.4
RN7SL778P-201ENST00000607160 SHROOM2Q13796 1616 aa12.56□□□□□ -0.4
RN7SL778P-201ENST00000607160 RUSC2Q8N2Y8 1516 aa12.56□□□□□ -0.4
RN7SL778P-201ENST00000607160 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
RN7SL778P-201ENST00000607160 ERCC6L2Q5T890 1561 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms