RNA–Protein interactions for RNA: ENST00000606983.5

CNN2-211, Transcript of calponin 2, humanhuman

TSL 3

Gene CNN2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-211ENST00000606983 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■■■■■ 66.8
CNN2-211ENST00000606983 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.523e-9■■■■■ 61.5
CNN2-211ENST00000606983 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.92□□□□□ -0.52e-13■■■■■ 50.4
CNN2-211ENST00000606983 EFTUD2Q15029 972 aaKnown RBP eCLIP11.08□□□□□ -0.646e-7■■■■■ 47.1
CNN2-211ENST00000606983 ZRANB2O95218 330 aaKnown RBP eCLIP11.64□□□□□ -0.554e-7■■■■■ 40.3
CNN2-211ENST00000606983 NONOQ15233 471 aaKnown RBP eCLIP12.87□□□□□ -0.355e-10■■■■■ 34.1
CNN2-211ENST00000606983 GTF2F1P35269 517 aaKnown RBP eCLIP11.85□□□□□ -0.511e-6■■■■■ 31.2
CNN2-211ENST00000606983 AARSP49588 968 aaKnown RBP eCLIP12.09□□□□□ -0.474e-6■■■■■ 30.6
CNN2-211ENST00000606983 SF3B4Q15427 424 aaKnown RBP eCLIP10.19□□□□□ -0.781e-6■■■■■ 30.1
CNN2-211ENST00000606983 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.79□□□□□ -0.522e-7■■■■■ 29
CNN2-211ENST00000606983 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.66□□□□□ -0.545e-8■■■■□ 26.5
CNN2-211ENST00000606983 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.38□□□□□ -0.752e-7■■■■□ 25.8
CNN2-211ENST00000606983 FUSP35637 526 aaKnown RBP eCLIP7.28□□□□□ -1.241e-8■■■■□ 25.7
CNN2-211ENST00000606983 PRPF4O43172 522 aaKnown RBP eCLIP10.93□□□□□ -0.661e-6■■■■□ 23.9
CNN2-211ENST00000606983 SMNDC1O75940 238 aaKnown RBP eCLIP10□□□□□ -0.812e-6■■■■□ 23.8
CNN2-211ENST00000606983 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.74□□□□□ -0.538e-6■■■■□ 23.6
CNN2-211ENST00000606983 DDX3XO00571 662 aaKnown RBP eCLIP11.86□□□□□ -0.513e-12■■■■□ 23.1
CNN2-211ENST00000606983 PCBP2Q15366 365 aaKnown RBP eCLIP10.89□□□□□ -0.673e-6■■■■□ 21.9
CNN2-211ENST00000606983 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.15□□□□□ -0.952e-9■■■■□ 21.8
CNN2-211ENST00000606983 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.458e-7■■■■□ 21.3
CNN2-211ENST00000606983 EWSR1Q01844 656 aaKnown RBP eCLIP8.73□□□□□ -1.012e-7■■■□□ 19.1
CNN2-211ENST00000606983 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.136e-8■■■□□ 18.5
CNN2-211ENST00000606983 TAF15Q92804 592 aaKnown RBP eCLIP8.83□□□□□ -12e-8■■■□□ 17
CNN2-211ENST00000606983 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.591e-6■■■□□ 16.4
CNN2-211ENST00000606983 TARDBPQ13148 414 aaKnown RBP eCLIP10.78□□□□□ -0.682e-6■■■□□ 14.8
CNN2-211ENST00000606983 GPKOWQ92917 476 aaPredicted RBP eCLIP12.96□□□□□ -0.339e-6■■□□□ 14.5
CNN2-211ENST00000606983 YBX3P16989 372 aaKnown RBP eCLIP13.8□□□□□ -0.22e-7■■□□□ 13.5
CNN2-211ENST00000606983 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.221e-6■■□□□ 11.9
CNN2-211ENST00000606983 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.055e-9■■□□□ 11.7
CNN2-211ENST00000606983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■□□□□ 11.1
CNN2-211ENST00000606983 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.91□□□□□ -0.826e-7■□□□□ 11
CNN2-211ENST00000606983 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■□□□□ 10.1
CNN2-211ENST00000606983 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■□□□□ 10
CNN2-211ENST00000606983 ILF3Q12906 894 aaKnown RBP eCLIP11.11□□□□□ -0.636e-7■□□□□ 9.4
CNN2-211ENST00000606983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■□□□□ 8.3
CNN2-211ENST00000606983 PPIGQ13427 754 aaKnown RBP eCLIP12.37□□□□□ -0.435e-7■□□□□ 8.2
Retrieved 36 of 36 RNA–protein pairs in 7.4 ms