RNA–Protein interactions for RNA: ENST00000606842.1

RN7SKP290-201, Transcript of RNA, 7SK small nuclear pseudogene 290, humanhuman

BASIC

Gene RN7SKP290, Length 195 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP290-201ENST00000606842 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
RN7SKP290-201ENST00000606842 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
RN7SKP290-201ENST00000606842 ABCC9O60706 1549 aa21■□□□□ 0.95
RN7SKP290-201ENST00000606842 RB1CC1Q8TDY2 1594 aa20.03■□□□□ 0.8
RN7SKP290-201ENST00000606842 NACADO15069 1562 aa19.92■□□□□ 0.78
RN7SKP290-201ENST00000606842 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
RN7SKP290-201ENST00000606842 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
RN7SKP290-201ENST00000606842 UNC13AQ9UPW8 1703 aa19.59■□□□□ 0.73
RN7SKP290-201ENST00000606842 BICRAQ9NZM4 1560 aa19.55■□□□□ 0.72
RN7SKP290-201ENST00000606842 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
RN7SKP290-201ENST00000606842 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
RN7SKP290-201ENST00000606842 DCAF1Q9Y4B6 1507 aa19.42■□□□□ 0.7
RN7SKP290-201ENST00000606842 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
RN7SKP290-201ENST00000606842 SHROOM4Q9ULL8 1493 aa19.33■□□□□ 0.68
RN7SKP290-201ENST00000606842 CC2D2AQ9P2K1 1620 aa19.03■□□□□ 0.64
RN7SKP290-201ENST00000606842 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
RN7SKP290-201ENST00000606842 EIF4G1Q04637 1599 aaKnown RBP19■□□□□ 0.63
RN7SKP290-201ENST00000606842 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
RN7SKP290-201ENST00000606842 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
RN7SKP290-201ENST00000606842 DNAJC5Q9H3Z4 198 aa18.36■□□□□ 0.53
RN7SKP290-201ENST00000606842 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
RN7SKP290-201ENST00000606842 HMGXB3Q12766 1538 aa18.27■□□□□ 0.51
RN7SKP290-201ENST00000606842 CUX2O14529 1486 aa18.26■□□□□ 0.51
RN7SKP290-201ENST00000606842 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
RN7SKP290-201ENST00000606842 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
RN7SKP290-201ENST00000606842 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
RN7SKP290-201ENST00000606842 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
RN7SKP290-201ENST00000606842 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
RN7SKP290-201ENST00000606842 NESP48681 1621 aa18.05■□□□□ 0.48
RN7SKP290-201ENST00000606842 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
RN7SKP290-201ENST00000606842 MROH2BQ7Z745 1585 aa17.99■□□□□ 0.47
RN7SKP290-201ENST00000606842 LAMC3Q9Y6N6 1575 aa17.98■□□□□ 0.47
RN7SKP290-201ENST00000606842 THOC2Q8NI27 1593 aaKnown RBP17.97■□□□□ 0.47
RN7SKP290-201ENST00000606842 PDS5BQ9NTI5 1447 aa17.82■□□□□ 0.44
RN7SKP290-201ENST00000606842 KIF21AQ7Z4S6 1674 aa17.81■□□□□ 0.44
RN7SKP290-201ENST00000606842 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
RN7SKP290-201ENST00000606842 WDR62O43379 1518 aa17.71■□□□□ 0.43
RN7SKP290-201ENST00000606842 WIZO95785 1651 aa17.71■□□□□ 0.42
RN7SKP290-201ENST00000606842 MRC2Q9UBG0 1479 aa17.69■□□□□ 0.42
RN7SKP290-201ENST00000606842 CFTRP13569 1480 aa17.62■□□□□ 0.41
RN7SKP290-201ENST00000606842 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
RN7SKP290-201ENST00000606842 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
RN7SKP290-201ENST00000606842 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
RN7SKP290-201ENST00000606842 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
RN7SKP290-201ENST00000606842 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
RN7SKP290-201ENST00000606842 PRDM2Q13029 1718 aa17.37■□□□□ 0.37
RN7SKP290-201ENST00000606842 CCDC88BA6NC98 1476 aa17.32■□□□□ 0.36
RN7SKP290-201ENST00000606842 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
RN7SKP290-201ENST00000606842 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
RN7SKP290-201ENST00000606842 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
RN7SKP290-201ENST00000606842 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
RN7SKP290-201ENST00000606842 ZNF608Q9ULD9 1512 aaPredicted RBP17.23■□□□□ 0.35
RN7SKP290-201ENST00000606842 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
RN7SKP290-201ENST00000606842 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
RN7SKP290-201ENST00000606842 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
RN7SKP290-201ENST00000606842 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
RN7SKP290-201ENST00000606842 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
RN7SKP290-201ENST00000606842 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
RN7SKP290-201ENST00000606842 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
RN7SKP290-201ENST00000606842 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
RN7SKP290-201ENST00000606842 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
RN7SKP290-201ENST00000606842 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.32
RN7SKP290-201ENST00000606842 WDR97A6NE52 1622 aa16.99■□□□□ 0.31
RN7SKP290-201ENST00000606842 CHD1O14646 1710 aa16.98■□□□□ 0.31
RN7SKP290-201ENST00000606842 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
RN7SKP290-201ENST00000606842 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
RN7SKP290-201ENST00000606842 SOGA1O94964 1423 aa16.92■□□□□ 0.3
RN7SKP290-201ENST00000606842 CUX1P39880 1505 aa16.91■□□□□ 0.3
RN7SKP290-201ENST00000606842 FGD5Q6ZNL6 1462 aa16.9■□□□□ 0.3
RN7SKP290-201ENST00000606842 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
RN7SKP290-201ENST00000606842 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
RN7SKP290-201ENST00000606842 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
RN7SKP290-201ENST00000606842 SNAPC4Q5SXM2 1469 aa16.85■□□□□ 0.29
RN7SKP290-201ENST00000606842 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
RN7SKP290-201ENST00000606842 GRIN2BQ13224 1484 aa16.82■□□□□ 0.28
RN7SKP290-201ENST00000606842 SYNJ2O15056 1496 aa16.8■□□□□ 0.28
RN7SKP290-201ENST00000606842 SYNJ1O43426 1573 aa16.77■□□□□ 0.28
RN7SKP290-201ENST00000606842 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.28
RN7SKP290-201ENST00000606842 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
RN7SKP290-201ENST00000606842 FBLN2P98095 1184 aa16.75■□□□□ 0.27
RN7SKP290-201ENST00000606842 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
RN7SKP290-201ENST00000606842 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
RN7SKP290-201ENST00000606842 CHMP7Q8WUX9 453 aaPredicted RBP16.7■□□□□ 0.26
RN7SKP290-201ENST00000606842 NUP160Q12769 1436 aa16.63■□□□□ 0.25
RN7SKP290-201ENST00000606842 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
RN7SKP290-201ENST00000606842 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
RN7SKP290-201ENST00000606842 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
RN7SKP290-201ENST00000606842 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.253e-9■■■■□ 25.1
RN7SKP290-201ENST00000606842 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
RN7SKP290-201ENST00000606842 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
RN7SKP290-201ENST00000606842 SHROOM2Q13796 1616 aa16.58■□□□□ 0.24
RN7SKP290-201ENST00000606842 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
RN7SKP290-201ENST00000606842 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
RN7SKP290-201ENST00000606842 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
RN7SKP290-201ENST00000606842 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
RN7SKP290-201ENST00000606842 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
RN7SKP290-201ENST00000606842 RUSC2Q8N2Y8 1516 aa16.38■□□□□ 0.21
RN7SKP290-201ENST00000606842 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
RN7SKP290-201ENST00000606842 KIF13AQ9H1H9 1805 aa16.34■□□□□ 0.21
RN7SKP290-201ENST00000606842 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms