RNA–Protein interactions for RNA: ENST00000606828.2

MED16-211, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-211ENST00000606828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■■■■■ 163.7
MED16-211ENST00000606828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.56□□□□□ -0.084e-8■■■■■ 136.6
MED16-211ENST00000606828 SF3B1O75533 1304 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■■■■■ 121.2
MED16-211ENST00000606828 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.6■□□□□ 0.254e-12■■■■■ 70.6
MED16-211ENST00000606828 AARSP49588 968 aaKnown RBP eCLIP14.82□□□□□ -0.043e-6■■■■■ 61.8
MED16-211ENST00000606828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.8□□□□□ -0.042e-7■■■■■ 55.8
MED16-211ENST00000606828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.82□□□□□ -0.367e-7■■■■■ 50.8
MED16-211ENST00000606828 PCBP2Q15366 365 aaKnown RBP eCLIP12.87□□□□□ -0.357e-8■■■■■ 46.9
MED16-211ENST00000606828 EFTUD2Q15029 972 aaKnown RBP eCLIP12.98□□□□□ -0.334e-8■■■■■ 42.6
MED16-211ENST00000606828 NCBP2P52298 156 aaKnown RBP eCLIP12.57□□□□□ -0.41e-7■■■■■ 38.5
MED16-211ENST00000606828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.84□□□□□ -0.353e-7■■■■■ 38.5
MED16-211ENST00000606828 GTF2F1P35269 517 aaKnown RBP eCLIP15.07■□□□□ 03e-7■■■■■ 38.3
MED16-211ENST00000606828 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.761e-7■■■■■ 35.6
MED16-211ENST00000606828 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.4□□□□□ -0.261e-7■■■■■ 35.3
MED16-211ENST00000606828 EWSR1Q01844 656 aaKnown RBP eCLIP9.98□□□□□ -0.812e-7■■■■■ 35.2
MED16-211ENST00000606828 DDX6P26196 483 aaKnown RBP eCLIP14.59□□□□□ -0.073e-7■■■■■ 33.8
MED16-211ENST00000606828 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.294e-10■■■■■ 33.3
MED16-211ENST00000606828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.18□□□□□ -0.144e-8■■■■■ 29.6
MED16-211ENST00000606828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.01□□□□□ -0.172e-7■■■■■ 29.5
MED16-211ENST00000606828 RBFOX2O43251 390 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■■■■■ 29.1
MED16-211ENST00000606828 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.312e-8■■■■■ 28.4
MED16-211ENST00000606828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■■■■■ 27.6
MED16-211ENST00000606828 PRPF4O43172 522 aaKnown RBP eCLIP13.04□□□□□ -0.324e-7■■■■■ 27.5
MED16-211ENST00000606828 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.048e-7■■■■□ 25.8
MED16-211ENST00000606828 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.442e-6■■■■□ 25.8
MED16-211ENST00000606828 METAP2P50579 478 aaKnown RBP eCLIP15.76■□□□□ 0.113e-6■■■■□ 25.7
MED16-211ENST00000606828 SMNDC1O75940 238 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■■■□ 25.6
MED16-211ENST00000606828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.94■□□□□ 0.946e-7■■■■□ 24.7
MED16-211ENST00000606828 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.189e-7■■■■□ 24.3
MED16-211ENST00000606828 FTOQ9C0B1 505 aaKnown RBP eCLIP15.56■□□□□ 0.082e-6■■■■□ 24
MED16-211ENST00000606828 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.413e-8■■■■□ 24
MED16-211ENST00000606828 SF3A3Q12874 501 aaKnown RBP eCLIP12.13□□□□□ -0.479e-12■■■■□ 23.5
MED16-211ENST00000606828 ZRANB2O95218 330 aaKnown RBP eCLIP13.72□□□□□ -0.213e-6■■■■□ 23.5
MED16-211ENST00000606828 TAF15Q92804 592 aaKnown RBP eCLIP11.15□□□□□ -0.624e-7■■■■□ 22.2
MED16-211ENST00000606828 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.112e-6■■■■□ 20.4
MED16-211ENST00000606828 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.42□□□□□ -0.582e-7■■■■□ 20.2
MED16-211ENST00000606828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.4□□□□□ -0.14e-9■■■□□ 19
MED16-211ENST00000606828 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■■■□□ 18.3
MED16-211ENST00000606828 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.952e-6■■■□□ 17.8
MED16-211ENST00000606828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.01□□□□□ -0.171e-6■■■□□ 17.5
MED16-211ENST00000606828 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.31■□□□□ 0.043e-6■■■□□ 17.5
MED16-211ENST00000606828 PPIGQ13427 754 aaKnown RBP eCLIP15.68■□□□□ 0.17e-8■■■□□ 17
MED16-211ENST00000606828 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.18□□□□□ -0.149e-7■■■□□ 16.3
MED16-211ENST00000606828 CDC40O60508 579 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■■■□□ 16.3
MED16-211ENST00000606828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.06■□□□□ 0.165e-8■■■□□ 15.9
MED16-211ENST00000606828 SAFBQ15424 915 aaKnown RBP eCLIP15.43■□□□□ 0.061e-8■■■□□ 15.6
MED16-211ENST00000606828 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.63■□□□□ 0.091e-6■■■□□ 15.5
MED16-211ENST00000606828 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.267e-6■■■□□ 14.6
MED16-211ENST00000606828 NKRFO15226 690 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■□□□ 14.2
MED16-211ENST00000606828 RPS3P23396 243 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■□□□ 14.1
MED16-211ENST00000606828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.21□□□□□ -0.133e-7■■□□□ 14
MED16-211ENST00000606828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.57□□□□□ -0.561e-6■■□□□ 13.9
MED16-211ENST00000606828 HNRNPUQ00839 825 aaKnown RBP eCLIP17.3■□□□□ 0.363e-7■■□□□ 13.2
MED16-211ENST00000606828 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.061e-6■■□□□ 12.9
MED16-211ENST00000606828 BCCIPQ9P287 314 aaKnown RBP eCLIP14.23□□□□□ -0.132e-6■■□□□ 11.9
MED16-211ENST00000606828 SRSF7Q16629 238 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■□□□ 11.8
MED16-211ENST00000606828 DDX3XO00571 662 aaKnown RBP eCLIP14.02□□□□□ -0.171e-9■■□□□ 11.7
MED16-211ENST00000606828 TIA1P31483 386 aaKnown RBP eCLIP12.65□□□□□ -0.381e-9■■□□□ 11.5
MED16-211ENST00000606828 EIF3DO15371 548 aaKnown RBP eCLIP14.84□□□□□ -0.036e-8■□□□□ 10.9
MED16-211ENST00000606828 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.464e-6■□□□□ 10.1
MED16-211ENST00000606828 FKBP4Q02790 459 aaKnown RBP eCLIP17.55■□□□□ 0.47e-6■□□□□ 9.9
MED16-211ENST00000606828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.125e-6■□□□□ 9.5
Retrieved 62 of 62 RNA–protein pairs in 10.5 ms